Pseudomonas viciae: EPZ47_27485
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Entry
EPZ47_27485 CDS
T07167
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pvk
Pseudomonas viciae
Pathway
pvk00260
Glycine, serine and threonine metabolism
pvk00460
Cyanoamino acid metabolism
pvk00630
Glyoxylate and dicarboxylate metabolism
pvk00670
One carbon pool by folate
pvk00680
Methane metabolism
pvk01100
Metabolic pathways
pvk01110
Biosynthesis of secondary metabolites
pvk01120
Microbial metabolism in diverse environments
pvk01200
Carbon metabolism
pvk01230
Biosynthesis of amino acids
pvk01240
Biosynthesis of cofactors
pvk04981
Folate transport and metabolism
Module
pvk_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pvk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
EPZ47_27485
09102 Energy metabolism
00680 Methane metabolism
EPZ47_27485
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
EPZ47_27485
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
EPZ47_27485
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
EPZ47_27485
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
EPZ47_27485
Enzymes [BR:
pvk01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
EPZ47_27485
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
QBZ92274
UniProt:
A0A4V1CBG0
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Position
complement(6167740..6168993)
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AA seq
417 aa
AA seq
DB search
MFSKQDQIQGYDDALLAAMNAEEQRQEDHIELIASENYTSKRVMQAQGSGLTNKYAEGYP
GKRYYGGCEHVDKVEALAIERAKQLFGADYANVQPHSGSSANSAVYLALLQAGDTILGMS
LAHGGHLTHGAKVSSSGKLYNAVQYGIDTTTGLIDYDEVERLAVEHKPKMIVAGFSAYSK
TLDFPRFRQIADKVGALLFVDMAHVAGLVAAGLYPNPLPYADVVTTTTHKTLRGPRGGLI
LAKANEEIEKKLNAAVFPGAQGGPLMHVIAGKAVCFKEAAEPGFKAYQQQVIDNAQAMAG
VFIKRGYDVVSGGTDNHLFLVSLIRQGLTGKDADAALGRAHITVNKNAVPNDPQSPFVTS
GLRIGTPAVTTRGFKVTQCVTLAGWICDILDNLGDADVEANVAQQVAALCADFPVYR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaagcaagaccagatccagggttacgacgatgcactgctggcggcgatgaac
gccgaagagcaacgccaggaagatcacatcgagctgatcgcgtcagagaactacaccagc
aagcgcgtgatgcaggcccagggcagcggcctgaccaacaagtacgccgaaggctatcca
ggcaagcgctactacggtggctgcgagcacgtcgacaaagtcgaggccctggccatcgaa
cgcgccaagcaactgttcggtgccgattacgccaacgtccagccgcactccgggtcttcg
gccaacagcgccgtgtacctggctttgctgcaggccggcgacaccatcctgggcatgagc
ctggcccacggcggtcacttgacccacggcgccaaggtgtcgtcctcgggcaagctctac
aacgcggtgcaatacggcatcgacaccaccaccggcctgatcgactacgacgaagtcgag
cgcctggcggtggagcacaagccgaaaatgatcgtggccggcttctctgcctattccaag
accctcgatttcccacgcttccgtcagatcgccgacaaagttggtgcgctgctgttcgtc
gacatggcccacgtggctggcctggtcgctgccggtctgtacccgaacccactgccgtac
gccgacgtggtcaccaccaccacccacaagaccctgcgcggtccacgtggcggcctgatc
ctggccaaggccaacgaagagatcgagaaaaaactcaacgccgctgtattccctggcgcc
cagggcggtccgctgatgcatgtgatcgccggcaaggcggtgtgcttcaaggaagcggcg
gagcctggtttcaaggcttatcagcagcaagtgatcgataacgcccaggccatggctggc
gtgttcatcaagcgcggctacgatgtagtgtccggcggcaccgataaccacctgttcctg
gtcagcctgatccgtcagggcctgaccggcaaggacgccgatgctgccctgggccgcgcc
cacatcaccgtcaacaagaacgccgtgccgaacgacccgcagtcgccgttcgtgacctcg
ggcctgcgcatcggcaccccggcggtaaccactcgcggcttcaaggttacccagtgcgtc
acgctggccggctggatctgcgacatcctcgacaacctcggcgatgccgatgtcgaggcc
aatgtcgcccagcaagtggcggccctgtgcgcggacttcccggtttatcgctga
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