Pseudomonas viciae: EPZ47_27530
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Entry
EPZ47_27530 CDS
T07167
Name
(GenBank) choline dehydrogenase
KO
K03333
cholesterol oxidase [EC:
1.1.3.6
]
Organism
pvk
Pseudomonas viciae
Pathway
pvk00984
Steroid degradation
pvk01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
pvk00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00984 Steroid degradation
EPZ47_27530
Enzymes [BR:
pvk01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.3 With oxygen as acceptor
1.1.3.6 cholesterol oxidase
EPZ47_27530
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GMC_oxred_C
GMC_oxred_N
DAO
Abhydrolase_1
Pyr_redox_2
Abhydrolase_6
FAD_binding_2
FAD_oxidored
NAD_binding_8
FAD_binding_3
HI0933_like
Thi4
Pyr_redox
GIDA
Fer4_9
Fer4_2
Hydrolase_4
DUF4917
Fer4_6
Lycopene_cycl
GDI
Motif
Other DBs
NCBI-ProteinID:
QBZ92281
UniProt:
A0A4P7PMW6
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All DBs
Position
complement(6177471..6180923)
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AA seq
1150 aa
AA seq
DB search
MTRISTPISDIQEHYDVIVIGSGYGGGIAASRLSRAGRKVCLLERGREIQPGEYPNTMLA
ATEQLQVHDPEGHIGSRTGLFDLHVNAQQNVVVGCGLGGTSLINANVSLEPEPGVFEDPR
WPQAVRDHRDTLLKDGYARAREMLKPNPYPDSSPKLPKLDANKKSADYLKQGAHFYKPPI
NVTFDKLPNNLNHVGVEQLPCNGCGDCVSGCNNKAKNTTLMNYLPDAWNHGAEIFCQAEV
RHLERDGNGWIVHFQYLDSGREMFSAPTLFVRADIVVVSAGTLGSTEIMLRSRDKGLAMS
SQLGEHMSGNGDILGFGHNCDQVINGIGFGAHSAKELEPVGPCITSIIDMRTEGDWRSRM
VIEEGSIPGALGRPMVPSMAAFAGMIGVPTDTGFGASLKYKGREAESFLRGPYYGALHNM
QTYLIMSHDDAKGRMLLDDKDQLRIDWPGVGEQENVTLGNERLHQSTKALGGIWVENPIW
TKLLKHSIVSVHPLGGCVMGEDATQGVVNHKGQVFSGASGTDVYPGLYVTDGAVIPTSLA
VNPLLTISAVSERNMGLLAADRGWIIDYTLPSAPRKPVAAPTLGVQFTETMKGYFSTAFT
QPQGTDLKVYEAAAKRGKADNSPIEFTLTITAADLNRLIKEPEHAATLVGTLDAPLLSPK
PLVASNGVFNLFEQYQEQVGVRHMNYDMKLTAEDGSDYYFSAFKTVPEDDGVLNIWPDTS
TLYVTLYRGPDKTGAVIGSGVMHILPADFAKQMTTMKVLNARNERERVEALARFGKFFAG
ILWESYGGVFAGDVYFNPDAPPRLKRPLDAPAPTVHFFQTEDNVELRLTRYQAGTKGPVM
LVHGLGVGSNIFSTDTIQTNLLEYLCKHEYDVWLLDLRVSILLPASKHEWNGDQVAQYDF
KAAIEQIQQATLARDVQCVVHCYGATTFFMSMLAGLQGVRSVVCSQIAADTVVATATGLK
AGLHLPGMLDAIGIKSLTAYADTKENWFNKLYDKALNGYARIEAQGYCTNPVCHRITFMY
ASLYRHDTLNETLHDNLHELFGESNMHTFEHLALIVRKGHLVDFKGNDVYMPHFDRLKLP
ICFISGADNQCYLPQSTLKTYERLCDMHGPQLFSRHEVAGYGHIDCIFGKDAVVDVYPLI
LEHLEKTALG
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgactcggatctcgacccccatcagcgatatccaggaacattacgacgttatcgtcatc
ggttccggctacggcggcggcattgccgcttcgcgcctgtcccgggccgggcgcaaggtc
tgtctgttggagcgcggccgggagatccagcccggtgaataccccaacaccatgctcgcg
gccaccgagcaattgcaggtgcatgacccggaggggcacatcggttcgcgtaccgggttg
ttcgacctgcacgtcaacgcccagcagaacgtggtggtcggttgcggcctgggcggcact
tcgctgatcaatgccaacgtctcgctggaaccggagcccggcgtgttcgaggacccgcgc
tggccgcaggcggtgcgtgatcaccgtgacacgttgctcaaggatggttatgcgcgggcc
cgggagatgctcaagcccaacccgtacccggattcgtcgccgaagctgcccaagctcgac
gccaacaagaagtccgccgactacctcaagcaaggcgcgcatttctacaagccgccgatc
aacgtgaccttcgacaagctgcccaacaacctcaaccacgtcggtgtcgagcaattgccg
tgcaatggctgtggtgactgtgtctccggctgtaacaacaaggccaagaacaccacgctg
atgaattacttgccggacgcctggaaccacggcgcggaaattttctgccaggccgaggtg
cggcatctggagcgagatggcaatggctggatcgtgcatttccaatacctggacagcggc
cgcgaaatgttctcggcgccgaccctgtttgtgcgggccgacatcgtggtggtgtccgcc
ggtacgctgggctccaccgagatcatgttgcgctcccgggacaaaggcctggcgatgtcc
agtcaactgggcgagcacatgagcggcaacggcgacatcctcggcttcggccacaactgt
gaccaggtcatcaacggcatcggctttggcgctcattcggccaaggaactggagcctgtg
gggccctgcatcacgtcgatcatcgacatgcgcaccgagggcgactggcgcagccgcatg
gtcatcgaggaaggctcgatccccggcgccctcgggcggcccatggtgccgagcatggcg
gcgtttgccgggatgatcggcgtgcccaccgacaccggtttcggggccagcctcaaatac
aaaggccgggaggccgagagcttcctgcgcggcccttattacggcgcgctgcataacatg
cagacctacctgatcatgagccacgacgacgccaaggggcgcatgctgctcgacgacaag
gaccagttgcgcatcgactggcccggagtcggcgagcaggagaacgtcaccctcggcaat
gaacgcctgcaccagagcaccaaagcgctgggcgggatctgggtcgagaacccgatctgg
accaagctgctcaagcacagcatcgtttcggtccatccattgggcggttgcgtgatgggt
gaagacgcgacgcaaggcgtggtcaaccacaagggccaggtgttcagtggcgccagcggc
acggacgtttaccccggcctgtacgtgaccgacggtgcggtgattccgacatccctggct
gttaacccgttgctgaccatctcagcggtgagcgagcgcaacatgggcctgctggcggcg
gatcggggctggatcatcgactacacgctgccctcggccccgcgcaaaccggtggcggcg
ccgacgctcggcgtgcagttcaccgaaaccatgaagggttacttttccaccgccttcacc
cagccacagggcaccgacctcaaggtctatgaagcggcggccaagcgcggcaaggccgac
aactcgccgatcgagttcaccctgaccattaccgccgccgacctcaatcgcctgatcaag
gagccggaacacgccgcgaccctggtgggcacgctggatgcgccactgctttcgcccaag
ccgctggtcgccagcaatggcgtgttcaatctgttcgagcaataccaggaacaggtcggt
gtgcggcacatgaactacgacatgaagctgaccgccgaagacggcagcgattactacttc
agcgccttcaagaccgtgcccgaggacgacggcgtactgaacatctggcccgacaccagc
acgctgtatgtcacgctgtatcgcgggccggacaagactggcgcggtgatcggttcgggg
gttatgcacattctgccggccgacttcgccaagcagatgaccaccatgaaagtgctcaac
gcacgcaacgagcgtgagcgggtagaggcgctggcgcgcttcggcaagttcttcgccggg
atcttgtgggagagttacggtggggtgttcgccggtgacgtgtacttcaatccggacgcg
ccgccccgcttgaaacggccactggatgcaccggcgccgactgtgcatttcttccagacc
gaagacaatgtcgagctgcgcctgacccgctaccaggcaggcaccaagggcccggtgatg
ctggttcacggcctgggcgtgggctcgaatattttctccaccgacaccatccagaccaac
ttgctggagtacctgtgcaaacacgagtacgacgtctggctgctggacctgcgggtgagc
atcctgctgccggccagcaagcatgaatggaacggcgaccaagtggcccagtacgacttc
aaggcagccatcgagcagatccagcaggcgaccctggcccgtgacgtgcagtgcgtggtg
cattgctacggcgcgacgactttcttcatgtcgatgctggcggggttgcaaggggtgcgc
tcggtggtctgctcgcagattgccgccgatacggtggtcgccacggcgaccggtttgaaa
gccggcctgcacttgccgggaatgctcgacgccatcggcatcaaatccctcacggcgtac
gccgacaccaaggaaaactggttcaacaaactctacgacaaggccctcaatggttacgcc
cggatcgaggcccagggctattgcaccaacccggtctgccaccgcatcacgttcatgtat
gcctcgctgtaccgtcacgacaccctcaacgaaaccctgcacgacaacctgcatgagttg
ttcggcgagtcgaacatgcacaccttcgagcacctggcgctgatcgtgcgcaaggggcac
ctggtggacttcaagggcaacgacgtctacatgccgcatttcgatcggttgaagttgccg
atctgcttcatcagcggcgccgacaaccagtgctacctgccacaaagcaccctcaagacc
tacgagcgactgtgcgatatgcacggcccgcagctgttcagccgtcacgaagtggcgggc
tacggccacatcgactgcatcttcggcaaggatgcggtggtggatgtgtatccgctcatc
cttgaacacctggagaagacggcgctcggttga
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