Pseudomonas viciae: EPZ47_28115
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Entry
EPZ47_28115 CDS
T07167
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
pvk
Pseudomonas viciae
Brite
KEGG Orthology (KO) [BR:
pvk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvk03021
]
EPZ47_28115 (rpoH)
Transcription machinery [BR:
pvk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EPZ47_28115 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
ImpA_N
UCR_14kD
IF2_N
Motif
Other DBs
NCBI-ProteinID:
QBZ92390
UniProt:
A0A4P7PN40
LinkDB
All DBs
Position
complement(6297628..6298482)
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AA seq
284 aa
AA seq
DB search
MTTSLQPAYALVPGANLEAYVHTVNSIPLLTPEQERELAESLYYEQDLEAARQMVLAHLR
FVVHIARSYSGYGLAQADLIQEGNVGLMKAVKRFNPEMGVRLVSFAVHWIKAEIHEFILR
NWRIVKVATTKAQRKLFFNLRSQKKRLAWLNNEEVHRVAESLGVEPREVREMESRLTGHD
MAFDPAAEADDDSAFQSPANYLEDHRYDPARQLEDADWSDNSNTNLHEALEVLDERSRDI
LYQRWLAEEKATLHDLAQKYNVSAERIRQLEKSAMNKLKVSIAA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaccacttctttgcaacctgcttatgctctggtcccgggtgcgaacctggaggcttat
gtgcacacggtgaacagcattcccttgctgacgcctgagcaggagcgtgaactggccgag
agtctctattatgagcaggatcttgaggcggctcggcagatggtgctcgcccacctgcgt
tttgtcgtacatatcgcccgcagctattctggctatgggctggcccaggccgacctgatc
caggaaggcaacgttggcctgatgaaggcggtcaagcgtttcaacccggaaatgggtgta
cgcctggtatcgttcgccgtgcactggatcaaggcggaaatccacgagttcatcctgcgc
aactggcgcatcgtgaaagttgcgaccaccaaggcccagcgcaagctgttcttcaacctg
cgcagccagaagaagcgtctggcctggctgaacaacgaagaggtccatcgcgtggccgag
agcctcggggtagagcctcgggaagtgcgcgagatggaaagccgcctgaccggccatgac
atggccttcgacccggccgccgaagcggacgacgacagcgctttccaatcgccggccaac
tacctggaagaccaccggtacgacccggcgcgtcaactggaagacgccgactggagcgac
aactccaacaccaacctgcacgaagccctggaagtgctggacgaacgcagccgcgacatc
ctctaccagcgctggctggccgaggaaaaagccacgctgcacgacctggcgcagaagtac
aacgtgtcggccgagcggattcgtcagcttgagaagagcgcgatgaacaagctcaaggtg
tcgatcgccgcctga
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