KEGG   Pseudomonas viciae: EPZ47_28995
Entry
EPZ47_28995       CDS       T07167                                 
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
pvk  Pseudomonas viciae
Pathway
pvk03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pvk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    EPZ47_28995 (xth)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pvk03400]
    EPZ47_28995 (xth)
Enzymes [BR:pvk01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     EPZ47_28995 (xth)
DNA repair and recombination proteins [BR:pvk03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     EPZ47_28995 (xth)
SSDB
Motif
Pfam: Exo_endo_phos CbiK
Other DBs
NCBI-ProteinID: QBZ92560
UniProt: A0A4P7PNI0
LinkDB
Position
6477847..6478626
AA seq 259 aa
MRIISVNVNGIQAAVERGLLSWLQAQNADVICLQDTRASAFELDDAAFQLDGYFLYACDA
EVPAQGGVALYSRLQPKAVINGLGFETADRYGRYLQADFDKVSIATLLLPSGQNGDEDLN
QKFKLMDDFARYLDKQRRKRREYIYCGSLYVAQQKLDIKNWRDSQQSPGFLAPERAWMDE
IIGNMGYVDALREVSREGDQYSWWPDNEQAEMLNLGWRFDYQLLTPGLRRFVRSARLPRQ
PRFSQHAPLIVDYDWTLTI
NT seq 780 nt   +upstreamnt  +downstreamnt
atgcggatcatcagtgtgaacgtcaatggtattcaggctgcagtggagcgtggtttgctc
agttggctgcaagcacagaatgccgacgtcatctgcctgcaggacacccgcgcctccgcc
tttgaactggacgatgcagccttccaactggatggttacttcctttatgcctgcgatgcc
gaagtccccgcccagggtggcgtggctttgtactcgcggctgcaaccgaaggctgtcatc
aacggtctcggtttcgagacggcggaccgctacgggcgctacctgcaagccgatttcgac
aaggtcagcatcgcgaccttactgctcccgtcgggacagaacggcgatgaagatttgaat
cagaaattcaagttaatggacgacttcgcccgctatctggataaacagcggcgcaaacgt
cgcgagtacatctattgtggctcgctgtatgtggcgcaacagaagctggatatcaagaac
tggcgcgacagccagcaatctcctggcttcctggcgccggaacgggcctggatggacgag
atcattggcaacatgggttatgtcgacgccctgcgcgaagtcagccgtgaaggcgaccag
tacagctggtggccagacaacgaacaggccgagatgctcaacctcggctggcgtttcgac
taccagttgctgacgcccggcctgcgccgctttgtacgcagcgcccgcctgccgcgccag
ccacggttctcgcagcatgcgccgctgatcgtcgattacgactggacgctaacgatctaa

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