Pseudomonas viciae: EPZ47_28995
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Entry
EPZ47_28995 CDS
T07167
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pvk
Pseudomonas viciae
Pathway
pvk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pvk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EPZ47_28995 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvk03400
]
EPZ47_28995 (xth)
Enzymes [BR:
pvk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
EPZ47_28995 (xth)
DNA repair and recombination proteins [BR:
pvk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
EPZ47_28995 (xth)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
CbiK
Motif
Other DBs
NCBI-ProteinID:
QBZ92560
UniProt:
A0A4P7PNI0
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All DBs
Position
6477847..6478626
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AA seq
259 aa
AA seq
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MRIISVNVNGIQAAVERGLLSWLQAQNADVICLQDTRASAFELDDAAFQLDGYFLYACDA
EVPAQGGVALYSRLQPKAVINGLGFETADRYGRYLQADFDKVSIATLLLPSGQNGDEDLN
QKFKLMDDFARYLDKQRRKRREYIYCGSLYVAQQKLDIKNWRDSQQSPGFLAPERAWMDE
IIGNMGYVDALREVSREGDQYSWWPDNEQAEMLNLGWRFDYQLLTPGLRRFVRSARLPRQ
PRFSQHAPLIVDYDWTLTI
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcatcagtgtgaacgtcaatggtattcaggctgcagtggagcgtggtttgctc
agttggctgcaagcacagaatgccgacgtcatctgcctgcaggacacccgcgcctccgcc
tttgaactggacgatgcagccttccaactggatggttacttcctttatgcctgcgatgcc
gaagtccccgcccagggtggcgtggctttgtactcgcggctgcaaccgaaggctgtcatc
aacggtctcggtttcgagacggcggaccgctacgggcgctacctgcaagccgatttcgac
aaggtcagcatcgcgaccttactgctcccgtcgggacagaacggcgatgaagatttgaat
cagaaattcaagttaatggacgacttcgcccgctatctggataaacagcggcgcaaacgt
cgcgagtacatctattgtggctcgctgtatgtggcgcaacagaagctggatatcaagaac
tggcgcgacagccagcaatctcctggcttcctggcgccggaacgggcctggatggacgag
atcattggcaacatgggttatgtcgacgccctgcgcgaagtcagccgtgaaggcgaccag
tacagctggtggccagacaacgaacaggccgagatgctcaacctcggctggcgtttcgac
taccagttgctgacgcccggcctgcgccgctttgtacgcagcgcccgcctgccgcgccag
ccacggttctcgcagcatgcgccgctgatcgtcgattacgactggacgctaacgatctaa
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