Pseudomonas viciae: EPZ47_29140
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Entry
EPZ47_29140 CDS
T07167
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
KO
K11891
type VI secretion system protein ImpL
Organism
pvk
Pseudomonas viciae
Pathway
pvk02025
Biofilm formation - Pseudomonas aeruginosa
pvk03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pvk00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
EPZ47_29140 (tssM)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
EPZ47_29140 (tssM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pvk02044
]
EPZ47_29140 (tssM)
Secretion system [BR:
pvk02044
]
Type VI secretion system
Imp/Vas secretion system core components
EPZ47_29140 (tssM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IcmF-related_N
IcmF-related
IcmF_C
IcmF_helical
Bax1-I
AAA_10
T7_gp14
Motif
Other DBs
NCBI-ProteinID:
QBZ92588
UniProt:
A0A4P7PNJ3
LinkDB
All DBs
Position
complement(6507490..6510990)
Genome browser
AA seq
1166 aa
AA seq
DB search
MKAFFSFMTRWVIPLLGLIALSLIIWFVGPLLEWLVPEGRRWALIILVFAVWIAYRVLRI
IQARRQAAEVMRSLAAQTPPDPSSIATAEELETLRQRMDEALTLLKKAKLGGDERRNLYE
LPWYVIIGPPGSGKTTALVNSGLHFPLAAQLGAGAVRGVGGTRNCDWWFTDQAVLLDTAG
RYTTQDSDATVDKAAWLGFLGLLKKQRARRPIDGAFIAISLSDLLLGSDAERAAHAAAIR
LRIQELYTQLGVRFPIYLMLTKLDLVPGFMEYFDTLSKEERAQVWGMTFALDDGKSNDSP
LAHLQSEFTGLEQRLNDRLVERLQQERDPARRDLIYGFPQQFGALKDCLQSFLEGVFKPN
AFEERVLLRGVYFTSGTQEGSPIDRLIGSMAQSMNLDRQHLARQTGTGRSYFIEKLFTAV
AFAERGLVGVDPKVERRRKWIARGVLASTVVLVLVVSTLWWVSYRANQAYITQVDQKVAP
LGQTVQNLSPAQRDVLTVLPLLNAVKHLADDAPDWAEGLGLYQGDMLEAESGSVYRKLLI
AVFAPRLLTRIEEQLHSGGNSDFLYEGLKAYLMLADNEHYDADFIKAWIALDWDRSLPRD
LPAEQRAALTAHLQSLFERRPPTARLDPRLIEDLRRQLQQLPVAQRVYDRIKRQKLPEGV
PDFRINEAAGRDAALVFSRKSGKPLGEPLSGFFTVKGYRQGFLLTSLSQTGTLAEEQWVL
GHEQADQQNVASLAADVRRLYFQDYQRQWDALLADIDFVPITSVAQAADVLRVLSGPSSP
LKKLLVAVAKETDLQQDERLLAAQGAPVEGGVDKLKERLGSLLGQEQASSNAPATSDDPI
TAHFAELNSIVSKQEGEPAAIDGLLADMNALYVQVSAMVGASGDALLGEAKNQASAAATR
VSLNAERQPPLVQGLVKSVVNSTTNSMMGGVRNQLNAAWTSEVVNIYRQSLAGRYPMSPG
SARDATLDDFGQFFGVGGVMDNYFRKYLQPYVDTSTPTWRWQPGAAQKLGIAPGVLQTFQ
RAATIRDAFFRSGGTQPMVRFELKPVAMDSTITQFLLDLDGQQLSYDHGPSRPTAMQWPN
PGSIGVVRISIMPPSSSGRSGITLDGPWAWFRLLEQSDLTAGNSPDRFNLRLRVDGASAS
YELRANSAFNPFKSRVLSGFSLPERL
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggcgtttttcagttttatgacccgctgggtcattccgttgctggggctgattgcc
ctgagcctgatcatctggttcgtcggcccgctgttggagtggctggtgcccgaaggccgg
cgctgggcattgatcattctggtgttcgcggtgtggatcgcctaccgggtgctacgcatc
atccaggctcgccgtcaggccgccgaagtgatgcgcagcctggccgcgcaaaccccgccc
gaccccagcagcatcgccactgccgaagagctcgaaaccctgcgccagcgcatggacgaa
gccctgaccctgctcaagaaagccaagctgggcggtgatgagcgtcgcaacctctacgag
ttgccgtggtacgtgatcatcggcccgccgggttcgggcaagaccacggcgctggtgaat
tccgggctgcatttcccgctggccgcgcaactgggcgccggtgcggtgcgcggcgtgggc
ggcacgcgcaattgtgattggtggttcaccgaccaggccgtcctgctcgacaccgccggc
cgctacaccacccaggacagtgacgcgaccgtcgacaaggccgcgtggctgggcttcctt
ggcctgctgaaaaaacaacgggcccggcgcccgattgacggtgcgttcatcgccatcagc
ctgtccgacctgttgctgggtagcgacgccgagcgtgccgcccatgccgccgcgattcgc
ttgcggatccaggagctgtacacccaattgggcgtgcgcttcccgatctacctgatgctc
accaagctcgacctggtgcccgggttcatggagtatttcgataccctgagcaaggaagag
cgcgcccaggtctggggcatgaccttcgccctggacgatggcaagagcaacgacagcccg
ctggcgcacctgcaaagcgaattcaccggccttgagcaacgcctcaacgaccgcttggtc
gagcgcttgcagcaagagcgtgatccggcgcggcgcgatctgatctacggcttcccgcag
caattcggcgccttgaaagattgcctgcaaagcttcctcgaaggcgtgttcaaacccaac
gccttcgaagagcgcgtgttgctgcgcggtgtgtatttcaccagtggcacccaggaaggc
agcccgatcgaccgcctgatcggttccatggcccagagcatgaacctggaccgccagcac
ctggcgcgccagaccggtaccgggcgcagttacttcatcgaaaaactcttcaccgccgtg
gccttcgccgagcgcgggctggtgggcgtcgatccgaaagtcgagcgtcgacgcaagtgg
atcgcccggggtgtactggcctccaccgtggtgctggtgttggtggtcagcacgttgtgg
tgggtcagctaccgcgccaaccaggcctacatcacccaggtcgaccagaaggtcgcgccg
ttgggccagaccgtgcaaaacctcagcccggcccagcgcgatgtgctgacggtgctgcca
ttgctcaatgccgtgaagcacttggccgatgatgcgcctgactgggctgaaggtctgggg
ctgtaccagggcgacatgctcgaagccgagtccggcagcgtctatcgcaagttgctgatc
gcggtgttcgccccacggctgctgacccgcatcgaagaacagctgcacagcggcggtaat
tcggacttcctctacgagggcttgaaggcctacctgatgctcgccgacaacgagcactac
gatgccgatttcatcaaggcctggatcgccctggattgggaccgcagcctgccgcgagac
ttgccggcagagcaacgtgcggccttgaccgcgcatctgcaatcgctgttcgagcggcgt
ccaccgactgcgcgcctggacccacgcctgatcgaagacctgcgccggcagttgcaacaa
ttgcccgtggcccagcgtgtctacgaccggatcaaacgccagaaactgcctgaaggcgta
ccggatttccgcatcaacgaagccgccgggcgtgacgcggcgctggtgttcagccgcaag
agcggcaagccgttgggcgagcctttgagcggcttcttcaccgtcaagggctaccgccag
ggcttcctgctcaccagcctgagccagaccggcaccctggccgaggagcagtgggtgctg
ggtcacgaacaggccgatcagcagaacgtcgccagcctggccgccgatgtgcgtcgcctg
tacttccaggactatcagcgtcaatgggacgccttgctggcggatatcgacttcgtgccg
atcaccagcgtggcccaggccgccgatgtgttgcgggtgctttccggcccgagctcgccg
ttgaagaagctgctggtggctgtggcgaaggaaaccgacctgcaacaggatgaacgcctg
ctggccgcccaaggtgcgccggtggagggcggcgtggacaagctcaaggagcgcctgggc
agtttgctcggccaggagcaggcgagctcaaacgcaccggcgaccagcgatgatccgatc
accgcgcacttcgccgagctcaacagcatcgtcagtaagcaagaaggcgaaccggcggcc
atcgatggcctgctggccgacatgaacgccttgtacgtgcaggtcagcgccatggtcgga
gccagcggcgatgccttgctcggtgaagccaagaaccaggcatcggccgccgccacccgc
gtcagcctcaatgctgaacgccagccgccgctggtgcagggcctggtcaagtcggtggtc
aactccaccaccaacagcatgatgggtggggtgcgcaatcaactgaacgccgcctggacc
agcgaagtggtgaacatctaccgtcagtccctggccgggcgttacccgatgtcgccgggc
agtgcgcgggacgcgaccctggatgacttcggtcagttcttcggggttggcggagtcatg
gacaattacttccgcaagtacctgcaaccctacgtcgacacctcgaccccgacctggcgc
tggcagccgggcgcggcgcagaagctcggcatcgccccaggcgtgctgcagaccttccag
cgggcggcgaccatccgcgatgcgttcttccgttccggcggcacccagccgatggtgcgt
ttcgagctcaaaccggtggcgatggactcgaccatcacccaatttctgctcgacctcgac
ggccaacagttgagctacgaccacggcccgagccgtccgaccgccatgcaatggcccaat
ccgggcagcattggcgtggtgcggatctcgatcatgccgccttcctccagcggtcgctcc
ggcatcactctggatgggccatgggcctggttccgactgctggaacaatcggacctgacc
gccggcaactcgccggatcgcttcaacctgcggctgcgggtcgatggcgccagcgcctct
tacgagttgcgcgccaacagcgccttcaaccccttcaagagccgggtgctcagcggcttc
agcctgccggagcggctatga
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integrated database retrieval system
