Pseudomonas viciae: EPZ47_29175
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Entry
EPZ47_29175 CDS
T07167
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
KO
K11900
type VI secretion system protein ImpC
Organism
pvk
Pseudomonas viciae
Pathway
pvk02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pvk00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
EPZ47_29175 (tssC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pvk02044
]
EPZ47_29175 (tssC)
Secretion system [BR:
pvk02044
]
Type VI secretion system
Imp/Vas secretion system core components
EPZ47_29175 (tssC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
BMFP
TssC
Motif
Other DBs
NCBI-ProteinID:
QBZ92595
UniProt:
A0A4P7PP93
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All DBs
Position
6517747..6519243
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AA seq
498 aa
AA seq
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MTDNTAREGAQNLGATQETSEFASLLLQEFKPKTERAREAVETAVRTLAEQALAQTDLVS
NDAIKSIESIIAAIDAKLTAQVNQVIHHPDFQQLESAWRGLHYLVNNTESDEQLKIRVLN
ISKTDLHKTLKKFKGTAWDQSPIFKKMYEEEYGQFGGEPYGCLVGDYYFDQSPPDVELLG
ELSKVCAAMHSPFIAAASPTVMGMGSWQELSNPRDLTKIFTTPEYAGWRSLRESEDSRYI
GLTMPRFLARLPYGAKTDPVEAFAFEENTDGADSSKYTWANAAYAMAVNINRSFKHFGWC
SRIRGVESGGEVENLPAHTFPTDDGGVDMKCPTEIAISDRREAELAKNGFMPLLHKKNTD
FAAFIGAQSLQKPAEYDDPDATANANLAARLPYLFATCRFAHYLKCIVRDKIGSFKEKDE
MQRWLQDWILNYVDGDPAHSTETTKAQHPLAAAEVIVEEVEGNPGYYNSKFYLRPHYQLE
GLTVSLRLVSKLPSTKGA
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgactgacaataccgcccgcgaaggcgctcagaacctgggtgccacccaagaaaccagc
gaattcgcgtccctgctgctgcaagaattcaagcccaagaccgagcgcgcccgcgaagcc
gtcgagaccgccgtgcggaccctggccgaacaggccctggcgcagactgacctggtgtcc
aacgacgccatcaagtcgatcgaatcgatcatcgccgccatcgacgccaagctcaccgcc
caggtcaaccaggtcattcaccaccccgacttccagcaactggaaagcgcctggcgtggc
ctgcactacctggtcaacaacaccgagagcgatgagcagctcaagatccgcgtgctcaac
atctccaagaccgacctgcacaagaccctgaagaaattcaagggcaccgcgtgggaccag
agcccgatcttcaagaagatgtacgaagaagaatacggccagttcggcggcgaaccttac
ggttgcctggtgggcgactactacttcgaccagtcgccaccggatgtcgaactgctgggc
gaactgtcgaaagtttgcgcggccatgcactcgccgttcatcgccgcggcatcgccgacc
gtgatgggcatgggctcgtggcaggaactgtcgaacccacgcgacctgaccaaaatcttc
accactccggaatacgccggctggcgttcgctgcgtgaatcggaagactcgcgctacatc
ggcctgaccatgccgcgcttcctggcgcgcctgccgtacggcgccaagaccgacccggtg
gaagccttcgccttcgaagaaaataccgacggcgccgacagctccaagtacacctgggcc
aacgccgcttacgcaatggcagtgaacatcaaccgttcgttcaaacacttcggctggtgc
tcgcgcatccgtggcgttgaatctggcggtgaagtggaaaacctgccggcccacacgttc
ccgaccgacgacggtggcgtggacatgaagtgcccgaccgaaatcgccatctcggaccgc
cgtgaagcggaactggcgaagaacggtttcatgccgctgctgcacaagaaaaacaccgac
ttcgcggccttcatcggcgcccagtcgttgcagaaaccggccgagtacgacgacccggac
gccaccgccaacgccaacctggccgcgcgcctgccgtacctgttcgccacctgccgtttc
gcccattacctgaagtgcatcgtgcgcgacaagatcggttccttcaaagagaaggacgag
atgcagcgctggttgcaggactggatcctcaactacgtcgacggtgatccggcgcactcc
accgagaccaccaaggcccagcacccactggcagcggccgaagtgatcgtcgaagaagtc
gaaggcaacccggggtactacaactccaagttctacctgcgtccgcactatcagctcgaa
ggactgaccgtgtcgctgcgcctggtatcgaaactgccttcgaccaagggcgcataa
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