Proteus mirabilis CYPV1: AOB99_01160
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Entry
AOB99_01160 CDS
T04093
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pvl
Proteus mirabilis CYPV1
Pathway
pvl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pvl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AOB99_01160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvl03019
]
AOB99_01160
03400 DNA repair and recombination proteins [BR:
pvl03400
]
AOB99_01160
Enzymes [BR:
pvl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AOB99_01160
Messenger RNA biogenesis [BR:
pvl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AOB99_01160
DNA repair and recombination proteins [BR:
pvl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AOB99_01160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
ALE24094
UniProt:
A0A1Z1SP35
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All DBs
Position
223119..224948
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AA seq
609 aa
AA seq
DB search
MSTAEVLNSMPSAQVILRETFGYQQFRPGQQEIIDTIITGRDCLVVMPTGGGKSLCYQIP
ALLLDGLTVVVSPLISLMKDQVDQLCLHGIDAAFLNSTQSRDEQLQVQMRCQRGEIKLLY
IAPERLMMESFLHHLVQWQPALLAVDEAHCISQWGHDFRPEYRGIGLLRQYLPDVPIIAL
TATADNTTRHDIINQLALRTPLVHISSFDRPNIRYTLVEKYKPLDQLWLFIRGQKGKSGI
IYCNSRSKVEETAERLGKRGLSIAAYHAGMDIATRAKVQDAFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAQAVLFYDPADMAWLRRCLDEKPESEQ
KAIESHKLNAMGAFAEAQTCRRLVLLNYFGEHRQQACGNCDICLDPPKQYDGLVDAQKAL
SCIYRTGQRFGIGYIVEILRGANNQRIRDNGHDKLPVYGIGKAHSHEYWMSVIRQLIHLG
MVAQNIVHRSALQLTEIARPILRGEVSLPLAVPRLLSPTKSRYQQTKNSHRQYDRKLFAK
LRKLRKSIADEENIPPFVVFNDVTLIEMAEQCPVCPDELLLINGVGQRKLERFGPAFMTL
IRDHIEGFE
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
gtgtccacagcagaagttcttaattcaatgccatcagctcaggttattttgcgcgaaacc
tttggttatcagcaatttcgaccaggccagcaagagattattgataccattatcaccggg
cgcgattgtttagtcgtcatgccgacgggagggggaaaatcactttgctatcaaattcct
gctcttttgcttgatggcttaaccgtagttgtttctccgttgatttctctaatgaaagat
caagttgatcaactctgcttacatggtattgacgcggcatttcttaattcaactcaaagc
cgagatgaacaactgcaagtacaaatgcgttgtcaacggggtgaaataaaactgttatat
attgcacctgaacgcctaatgatggagagttttcttcaccatttagtgcaatggcagcct
gctttattagcggtggatgaagcacactgtatttctcaatggggtcatgattttcgccct
gaataccgaggaattggcttattaagacagtatcttcctgatgtccctattattgcgtta
acggcgacggctgataatacaacacgtcatgacattattaatcagctcgcgttacgcact
cctttagttcatattagcagttttgaccgcccaaatattcgttatactttagttgaaaaa
tataaaccgctcgatcaactttggctgtttattcgtgggcagaaaggaaaatcaggcatt
atctattgtaatagtcgcagcaaagtagaagagaccgctgaacgactaggcaagcgagga
ttaagtatcgcggcttatcatgcgggtatggatattgccacacgagcgaaagtgcaagat
gcttttcaacgcgatgatttgcagattgtggtcgcaacggtcgctttcggtatgggaatt
aataaacccaatgtacgttttgtggttcattttgatattccgcgtaatattgaatcttac
tatcaagaaacgggacgcgcaggacgcgatggtttacctgcacaagcggtactgttttat
gatcccgcggatatggcttggctacgtcgttgtttagatgagaagccagaaagtgaacaa
aaagcgattgaatcccataaattaaatgccatgggggcttttgccgaagcacaaacttgt
cgacgtttagtgttacttaattactttggtgaacaccgccaacaagcttgtggtaactgc
gatatttgccttgatccacctaaacaatatgatgggttagtggatgcacaaaaagcgtta
tcttgcatctatcgtaccggacaacgttttggtattggttatattgttgaaattttacgc
ggtgccaataatcaacgcattcgcgataatggtcatgataaattgccagtttatggtatt
ggtaaagcccatagccatgaatattggatgagtgtgatccgccaattgatccatttaggt
atggttgcgcaaaatatcgttcatcgttctgcattacaattgactgagatagctcgaccg
atattgcgtggtgaggtgtcattacccttggcagtaccacgactattaagcccaacaaaa
agccgttatcagcaaacaaaaaatagtcatcgacagtacgataggaaattatttgcgaaa
ctacgcaaattacgtaaatctattgctgatgaagaaaatattccaccctttgtggtattt
aatgatgtcacactgattgaaatggcggaacaatgccctgtctgccctgatgaattgttg
ttgatcaatggggtaggacaacgaaaactagaacgatttgggccagcatttatgacactt
atccgtgatcatattgaggggttcgaatag
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