Proteus mirabilis CYPV1: AOB99_13500
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Entry
AOB99_13500 CDS
T04093
Symbol
recD
Name
(GenBank) exonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pvl
Proteus mirabilis CYPV1
Pathway
pvl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pvl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AOB99_13500 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvl03400
]
AOB99_13500 (recD)
Enzymes [BR:
pvl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AOB99_13500 (recD)
DNA repair and recombination proteins [BR:
pvl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AOB99_13500 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
Helicase_RecD
Viral_helicase1
AAA_11
SH3_13
AAA_22
PhoH
UvrD-helicase
UvrD_C
SLFN-g3_helicase
AAA_28
AAA_16
nSTAND3
SRP54
AAA
T2SSE
CbiA
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
ALE26314
LinkDB
All DBs
Position
complement(2977559..2979475)
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AA seq
638 aa
AA seq
DB search
MIKLLEQAIAQNLLRPLDLRFAQMLVADENPILLFIFAYLSAQTGAGHVCLPLNIIQQDK
LFDGRHTELSQAIWQKMAQPSAKEILAELNQSECVNQGHSDLPSPIILDNGLLYLQRMWR
YEEQVAQFFRQEQRVVDIDENQLTNVLNQLFPSVKTDAETNWQKVAAAVAITSPISIISG
GPGTGKTTTVAKILAAFVMLTANEKPIIQLAAPTGKAAARLTESLGKALAQLALSEEELK
WMPDQAQTIHRLLGAQPESQQVRYHRDNPLQLDILVIDEASMVDLPMMARLIEALPEHCH
VIFLGDKDQLASVEAGAVLGDICRFADQGFSQRRFEQIDRLTQGELQKDPASMTTSTKPV
SVVSDSLCLLRKSYRFGSHSGIGQLAFAVNQGQVKSAMTLLKKATVTQESTEREKHTDPQ
DIEFISLDTDESYMKMLQDVAKAYHHYLSLVAQKAAPETILHSFNQYRLLCALREGPFGV
TGLNERIEMLLHRQRLIRRPINSYQREYIGRPIMIQRNDSTLGLFNGDIGIMLNNDEGEM
KAFFQLPDGTLKAIQPSRLPQHETAYVMTVHKSQGSEFTHTALVLPTQFSPIVSRELLYT
AITRAKQKLSLYSSEYMVKMAIQTRIQRRSGLVEKLRY
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgattaaattattagaacaagcaattgcacaaaacctattgcgcccattagatttacgt
tttgctcaaatgctggtggcagatgaaaatcctatcctactgtttatttttgcctatctc
agtgctcaaacaggggcgggccatgtttgcttaccgttaaatatcatacaacaagataaa
ttgtttgatggacgacacaccgagctttcacaagccatttggcagaaaatggcgcaacca
tcagcgaaagaaatactggcagagcttaatcagagcgagtgtgttaatcaaggccatagt
gacttaccttcacctattattctcgataatggattactttatctacaaagaatgtggcgt
tatgaagagcaagttgcgcaattttttcgccaagagcaacgggtggttgatatcgatgaa
aatcaattaacaaacgtattaaatcaacttttcccaagtgttaagacagatgctgaaact
aactggcaaaaagtcgccgcagcggttgctattacaagccctatttcgattatttcgggt
ggcccaggaacagggaaaaccacgacagtagcaaagattttagctgcttttgtcatgcta
acggcgaatgaaaaacccattattcaactagccgcacccacgggaaaagcggcagctaga
ttgaccgaatcattaggtaaagcattagcgcaattggcactaagtgaagaagagttaaaa
tggatgcccgatcaagcgcaaaccattcatcgcttattaggtgcccaaccggaaagtcag
caagttcgttatcatcgcgataatccgctacaacttgatatcttggtcatagatgaagct
tctatggtggatttaccgatgatggcgcgtttaattgaggctttaccggaacattgccat
gttatttttctgggagataaagatcagctcgcttcggtagaggcgggagctgttttaggg
gatatttgtcgttttgcggatcaggggtttagccaacgccgttttgagcagattgatcgc
ttaacacaaggtgaattacagaaagatcccgcttctatgacgacttctactaagccagtt
tcggtggtcagtgattcactatgtttattgcgtaaaagttatcgttttggctcacattca
ggtattggtcaattagcttttgcggttaatcaaggacaagtgaagagtgctatgacgtta
ctgaaaaaagcgacagtaacacaagagagcactgagcgagaaaaacataccgatccgcag
gacatcgaatttatctcattagacaccgatgagagctatatgaagatgcttcaagatgtt
gctaaggcttatcatcactatctatcgttagtcgcgcaaaaagcagcaccagagactatt
cttcatagctttaatcaatatcgtttattgtgcgctttgcgagaagggccttttggtgtc
acaggactaaatgaacgtattgagatgctgttacatcgccaacgcttgatacgacgacct
ataaatagttatcagcgggagtatattggacgaccaattatgatccagcgtaatgacagc
acattggggctatttaatggtgatatcggcattatgcttaataacgatgaaggagaaatg
aaagctttctttcagttgcctgatggcacattgaaagctatccaacctagtcgtttaccg
caacatgagactgcttatgtgatgacagtacataaatcacaaggttcggaatttacccat
acggcactggtgttgccaacacaattttctcctattgttagccgagaattactctatacg
gcgataacgcgagccaagcagaagctatcactttattcttctgaatatatggtgaaaatg
gcgatccagacacgtattcaacgccgcagtggattagttgaaaaactgcgttactga
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