Proteus mirabilis CYPV1: AOB99_13505
Help
Entry
AOB99_13505 CDS
T04093
Symbol
recB
Name
(GenBank) exonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
pvl
Proteus mirabilis CYPV1
Pathway
pvl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pvl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AOB99_13505 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvl03400
]
AOB99_13505 (recB)
Enzymes [BR:
pvl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AOB99_13505 (recB)
DNA repair and recombination proteins [BR:
pvl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AOB99_13505 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
AAA_12
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
ALE26315
LinkDB
All DBs
Position
complement(2979468..2983106)
Genome browser
AA seq
1212 aa
AA seq
DB search
MSEVIQAQVLDPYTLPLYQRRLIEASAGTGKTYTIGLLYLRLLLGLGGESAFHRPLSVEE
ILVVTFTEAATDELRARIRQNIHQLRLACIRHQVENDNNAYQILLDQIPNKMVAAQWLLE
AERQMDEAAIYTIHGFCQRMLATNAFESGVLFEQVLIQDEYELKKRVCADFWRRHCYPLS
YDVAYAVSEIWSGPEQLLYEIQPYLQGECPEIQGIDFDAKKETVEQRHQAVIEAIDKVKA
LWRHHCNEIADWITSSGVDKRSYSSRFLPKWIDEITAWATPLETKSYQLPDCLSRFSQAT
LHEKTTKGAAPEHALFAEIELLCQQSLTLRDVIIANAIPEIRQGIENEKMRRGELGFDDL
LTRLDKALQREGGEALADAIRQRYPVAMIDEFQDTDPQQYRIFDTIYGEHTESGLLFIGD
PKQAIYAFRGADIFTYIRARQQTDHHYTLNTNWRSAPGMVSAVNKLFLRSKTPFLFDHIP
FIEVNSAEKNQHMKFIYQQKTVAPLNFWLAEGESLSTGNYEQLMASQCAMQIRDWLSAGD
NQQAWLIEQDNKSAVTSADIVVLVRSRREALLIRDALDLLSIQSVFLSNRESVFETNEAK
DLLWLLQAVVTPEKERVLRASLASALFGFNAQQIDELNQDEQRWNRYVEQFADYFVLWQK
RGVLPMLRKVMIENQIAENLLASQAGERRLTDIMHIGELLQETSLQLDSEHALIRWLAQQ
ISRPDAQAESQQMRLESDKNLVQICTIHKSKGLEYPIVCLPFACNYQEQKGALYHDRDEF
YAKLDIFNQPDSVRLADEERLAEDLRLLYVALTRAKFCCYVGVAPLVKGNKRKSGLTDLH
KNALGYLLQHGEEGNSELLHQSINQLLDDNIKVITLGDTSTHRYQSPHTTNIALDAAIFK
RKINDNWRITSYSGLTAQHSARGYLFDSADLDALVQSIAPGLDTDAKGEKTAQHSDELSI
HHFPRGAVAGTFLHSLLEQLDFSQPIDESWMQEQLIAQGFEEKWTPLLVAWMETLFHTPL
NAQGLCLADIPKEHQLDELQFYLPIEKEMSAAQLTALTRQYDPLSAQCPALNFQQVQGML
KGFIDLVFCWEGKYYVVDYKSNWLGESSEDYTQEAMSNAMRDHRYDLQYQLYTLALHRFL
QQRLPDYDYQRHFGGICYLFLRGIDADYPGNGVYTYLPEEKFVEALDALFKGEALEVNGS
KVNALGENNSND
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgaagtgatacaggcacaggtattagatccctatacacttcctttgtatcaaaga
cgcctcattgaggcgtctgcgggaacagggaaaacatacactatagggttattgtattta
cgattactgcttggattagggggcgagtcagcatttcatcgccccttaagtgttgaagag
atcttagtcgttacttttaccgaagcggcaacggatgaattacgcgcccgtattcgtcaa
aatattcatcagttaaggctagcctgtatccgtcatcaagtagaaaatgacaataacgct
taccaaatattattagatcaaatcccgaataaaatggtggcggcgcaatggctactagaa
gctgagcgtcaaatggatgaagccgccatttatactattcatggtttttgtcagcgcatg
ttagccactaacgcctttgaatctggtgtattgtttgaacaggtgttgatccaagatgaa
tatgagttaaaaaaacgtgtctgcgctgatttttggcgcaggcactgttatcccctttct
tatgatgttgcctatgcggtaagcgaaatttggtctggccctgagcaactgctgtatgaa
attcaaccctatttacaaggtgaatgccccgaaattcaaggtattgatttcgacgctaaa
aaagagactgttgaacagcgtcatcaagcagtcattgaggccattgataaagttaaagca
ctatggcgtcatcattgcaatgaaattgcagattggataacttcatctggtgttgataaa
cgcagttacagtagtcgtttcttacctaaatggatcgatgaaatcaccgcatgggccact
ccactcgaaaccaaaagttatcagttacctgactgtttaagtcgtttttcgcaagcaacc
ctacatgaaaaaactacaaagggtgctgcgcctgagcacgctttatttgcggaaatcgaa
ctactttgccaacaaagtttaacgttacgtgatgtgatcattgccaatgccattcctgaa
atacgccaagggatagaaaatgaaaaaatgcgtcgtggtgagttgggatttgatgatctg
ttaacgcgtctcgataaggcattgcaacgagaaggcggcgaagcattagcagatgctatt
cgccaacgttatcccgtcgcgatgattgacgaatttcaggataccgatcctcagcagtat
cgtatttttgatactatctatggtgagcatacagagagtggtttgctatttattggtgat
cccaaacaagccatttacgcatttcgtggtgcagatatctttacctatattcgggcaagg
caacaaaccgatcaccactatacattgaatactaactggcgctcagctccgggtatggta
agtgcagttaataaactgtttttacgttctaaaaccccttttttgtttgatcatattcct
tttattgaggtcaattcggctgaaaaaaatcagcatatgaagtttatttaccagcaaaaa
acagttgccccattaaatttttggttagctgaaggtgaaagcctttcaactggtaattat
gaacaattaatggcctcgcaatgtgcgatgcaaattcgtgactggttatcagccggtgac
aatcaacaagcttggttaatcgaacaagataataaaagcgctgttacatctgccgatatt
gtggtgctagtgcgtagtcgccgagaagcattattgatcagagatgcattagatctgtta
tctatccaatcagtatttttatccaatagagaaagtgtgtttgaaaccaatgaagccaaa
gatctactttggttactacaagcagtggtaacccctgaaaaagaacgggtgttaagagct
tctcttgccagtgcactgtttggatttaacgcacaacaaattgacgaacttaatcaagat
gaacagcgttggaaccgctatgtggagcaattcgctgattattttgtcttgtggcaaaaa
cgtggtgtgttacctatgctacgtaaagtcatgatagaaaaccaaatcgctgagaactta
ctcgcaagccaagcaggagaacgacgtttaaccgatatcatgcatattggcgagttgcta
caagaaacatcattacagcttgatagcgagcacgcccttattcgttggttagcccagcaa
atttctcgaccagatgcacaagcggaaagtcagcaaatgcgtttggaaagtgataaaaat
ctagtgcaaatttgtaccattcataaatctaaaggattggaatatcccattgtttgtcta
ccttttgcctgtaattatcaagaacaaaagggcgcgctttatcatgatagagatgaattt
tacgcaaaactagatatttttaatcaacctgatagcgtgcgtcttgctgatgaagagcga
ttggcagaggatttacgcttgttgtatgtggcattaactcgggcgaaattttgttgttat
gttggtgttgcgcctttggttaaaggaaataaacgtaagtcaggattaactgatttgcat
aaaaatgcgctgggatatctgttgcagcatggggaagagggtaatagtgagctattacat
caatccattaatcaattgcttgatgacaatataaaagtgatcacgttaggtgatacctca
acgcatcgatatcaatctccacacacaacgaatattgctttagatgccgccatatttaag
cgaaaaattaatgataattggcgtatcaccagttattcgggattaacggcacaacactct
gctcgtggatatctatttgatagtgctgatttggatgccttggtgcaatctatcgctccg
ggcttagataccgatgctaaaggtgagaaaacggcgcaacacagcgatgaactctctatt
catcacttccctcgtggtgcagtcgcggggacatttttacatagtttgcttgaacagctt
gatttttcacagcctattgatgaaagttggatgcaagagcaacttattgcccaaggtttt
gaggaaaaatggacgccattgttggtggcttggatggaaaccctttttcacaccccatta
aatgcgcaaggcttatgtttagctgatattcccaaggagcatcaactcgatgagctacaa
ttctatctgcctattgaaaaggagatgtcggcggcacagttaacagcattaacccgtcaa
tacgatcctttatctgcgcaatgtccagccctcaattttcagcaagtgcaaggcatgcta
aaaggttttattgacttagtattttgttgggagggtaagtattatgtggttgactataaa
tctaactggcttggtgaatcgagtgaggattacacgcaagaggcgatgagcaatgcaatg
cgcgatcatcgttatgatttacagtatcaactctatactttagcgctacatcgattttta
caacaacgcttacctgattatgattatcaacgtcattttggtgggatctgctatctcttc
ttacgtggtattgatgctgactacccgggcaatggcgtctatacctatctacctgaagaa
aagtttgtagaagcattagatgcgctatttaaaggggaagcgcttgaggttaacggcagt
aaagtgaacgcgctgggtgagaacaattcaaatgattaa
DBGET
integrated database retrieval system
