Penaeus vannamei (Pacific white shrimp): 113800510
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Entry
113800510 CDS
T06111
Symbol
cno
Name
(RefSeq) afadin
KO
K05702
afadin
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
113800510 (cno)
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Gene cluster
GFIT
Motif
Pfam:
RA
DIL
PDZ
FHA
PDZ_6
PDZ_2
RA_2
RASSF8-10_RA
RA_3
Motif
Other DBs
NCBI-GeneID:
113800510
NCBI-ProteinID:
XP_069988268
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All DBs
Position
17:complement(29245086..29487207)
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AA seq
1960 aa
AA seq
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MRFYFQDSGQKVATKCIRVSSNANCRYVIETLVEKFRPDMRMLSIPEYALYEIHENGEER
RLADDEKPLLVQLNWNKDDREGRFLLRRMDLKSAMGGELIFQAGHTIVNTLPPHPTTPVP
SKDQPFTRKLSKREKKELKKAEKMRRANETNENDSSVAEKLYTELPETSFTRSISNPEAV
MRRRRAQKLEKKLQQFRSKDGGPDTGGTLKIYGESLRPDVPYKTLLLSVRDNALSVVREM
LDKYGLYKEDPNNYCLIQNVVGGDEGYGGATSPQKEYILDDDECPLAILMNHPPSRGSIM
FHVRRRPADYGPRKRKKKPIKGMGGGGGPGGDAHEHQRPRDPHFLPDRLPFLIELGPDGQ
ELGGTGRQHQLHLNVTEVGTDRSAHTGGQSLQLFGPNIQARHCVIAHTEGIVTVTPCSRD
ADTFVNGQRIYETTILQHGCIVRFGRIHNFRFIDPQQDDRMRQHHLMDRSGQEKVGPGGP
GEKAEAGGDSVSHAGSHTGSQAGSRNSRSSAQERPNRADQSFEGRSNYERYPPARDPILP
AVLEFREESEDAFLHSITTDLDPIDVQFKLAPTYTLYMAARFRASTHYRPELSPTERAHR
LTEMLTKVAAMVQNVIHSRHGDPTSLAFWMANASELLHFLKQDRHICGYSLDAQDILAEA
VQVAFRSLVDCMQAELSTSLPMFLEDRDDVNEEEGSTAHVLSILSNTMALLRRCRVNAAL
TIQLFSQLFHFINMWVFNRIVADPLPNYCTRVWGIRLKRRLARIELWAEKQGLELAADCH
LARLSQAAMLLHAQKSAPDDIATISSTCFKLNSLQLRALLEKYQPAPDEPRIPQDLVDNV
VAVAESTADGLAREDGREVRLEEEIDLQLPFLLPEDGYSCDIVRGVPSGLAEFLNPLQHA
GLCRMNPQPSSSGYWTIYMHDQEMRPPPGPRSPSVMSNRSLSIPRGEPEIHVIQLHKSNN
GMGLSIVATKGVNQDKLGIYIKSVVPGGAADQDGRLQAGDQLLSVDGKSLIGISQERAAE
YMMETGPVVTLQVARQGAIYHGLATILSQPSPQVNRASQRKMRSRAEEVGRAAAMTNSQS
APNMGGYNERLVDWNQPPRHHPLPPTSSHSSLMARSSPNLAAAPEGYPGGRHLSERDLPS
KVLREHNQEPPAPPLLHQAPRMQASKSVPSLNSEAGSSVGGKPASLEVFNPSYSRTSSNT
SLSQPQNPHFAHHPHQHPQQQPQHQQQQHQQPPIRSRSTQNLSDGSYPGLVGRHPSNPSL
VVEEERYYQNVNFHQGPQDPRMGSTRTRPSQPLPMGSPASQGPPEQLRQDHPRHEPRSER
PASAFMQREDMVPQRTEMTRPASQRDIRADAKMMEMTEEVRRREERMRLNGHPPASQQQR
PGPQQVHRVPNAYSPGTPFSPEGFNGPQGFPGQHPGYHPATSQPISPQGTMAGLQQQPQH
AHPQYAGHPQGFPGGKFPPPTAPKPKSQVPQGPLSPDAPEKPMRQYGYEGINTDAPPRPP
PPEDGYRDSPPPPPPPTSTHPLLQTSRPASNVGYNMNSGQGNKSVFNKTSPWDREEKERN
DRRRREAVRHWRDEQISSLEGIENRTSQQEERLRTLRLEKEFQRRAEEMNNDDDEDEDED
EDVEDRENHRENEDDVKYNQENNATREYNKLTGNAPLITSGQEPRMNGGGPVDEERARKV
DEIRRKQQELEAASEVEERLLREAQRRQQEEQLRRFQLQQEQPQRQQQQQQQQQQQQQQH
SHYQHQHHATQRLDTLVGSPFQTQYSNGPVNGSRNLGGYPEHNQSTDSSHGMDTLVPGAQ
HSPVPPERGSSYSIMQQQSQHSSNNNRHKGPDGPPTTIKRVQFSETTTMDTHITYDNNAN
QEKTPRQDPDNFINEAETLLNSSPNRTGGTPGVIGAQEVYRDPRWRRLQEKQAQQAAAKT
PGPEKLSFKEKMKMFAMETGEAETPKDKVKISRAQRDIEH
NT seq
5883 nt
NT seq
+upstream
nt +downstream
nt
atgcggttctacttccaggactctggccagaaggtggccaccaagtgcatccgcgtgtcc
agcaacgccaactgccgctacgtgatcgagacgctggtcgagaagttccggccggacatg
aggatgctgtccatccccgagtacgcgctctacgagatccacgagaatggagaggagcga
cggctcgccgacgacgagaagcctctgctggtgcagctcaactggaacaaggacgaccgc
gaggggcgcttcctgctgcggaggatggacctcaagtccgccatggggggagagctgatt
ttccaggcaggtcataccatagtcaacaccctgccccctcaccccaccactcccgtgcct
tccaaagaccagcctttcacacgcaagctctccaagcgcgaaaagaaggagctcaagaag
gcagagaaaatgcgtagggccaatgaaacaaatgaaaatgattcttctgtagctgagaaa
ttatatacagaattgccagagacaagcttcacacgcagcatcagtaatcctgaggcagta
atgagacgaagacgagcacagaagttagagaagaagcttcaacaattccgaagcaaagat
ggtgggccagacacaggtggcactctgaagatttatggtgaatctctacgtcctgatgtg
ccttacaagacgctgcttctgtctgtccgtgacaatgctcttagtgttgttcgggagatg
ctcgacaaatatgggctgtacaaggaagaccccaataactactgtctcatacagaatgta
gttggaggtgacgaaggatatggaggagccacatccccacaaaaagaatatatccttgat
gatgatgaatgtcctttggccattctgatgaaccatcccccatctagagggtccatcatg
ttccacgtgcgacgacgccctgcggattacgggccgcgaaaaaggaagaagaagcccatc
aagggcatgggcggcgggggcggacctggtggcgacgcccacgagcaccagcgcccacgc
gacccgcacttcttgcccgacagactacccttcctcatcgagctcggacccgacggacag
gagctgggcgggacgggccgccagcaccagctgcacctcaacgtaactgaagtaggcacg
gaccgcagcgcccacacgggcggacagtcgctgcagctgttcgggccgaacatccaggcg
cgccattgcgtcatcgcccacacggagggcatcgtcacggtcacgccctgctccagggac
gccgacaccttcgtcaacgggcagcgcatttacgagaccaccattctgcagcacggctgc
attgtgaggttcggtcgtattcacaacttccggttcattgaccctcagcaggatgacagg
atgcgccaacatcatctcatggacaggtccgggcaggagaaggttggcccagggggacca
ggggagaaggcggaggctgggggggactccgtgtcgcatgctggttcacacacgggctca
caggccgggtcgcgcaactctaggtcgtctgcacaggaacgacccaacagagctgaccag
agctttgagggcaggagcaactacgagaggtacccaccagcgagggaccccatactcccg
gcagtgctggagttcagggaggagagcgaggatgccttccttcacagcatcactaccgac
ttggaccccatcgacgtgcagtttaaacttgccccaacatacacgctgtacatggctgct
agattcagggcatctactcattatcgcccagagctcagtcccacagagcgcgcccacagg
ctgactgaaatgctcacaaaggttgctgcaatggttcaaaatgttatacactctcgacac
ggagacccaacatctttggccttctggatggccaatgcgtccgaactgcttcacttcttg
aagcaagaccgacacatttgtggctactctcttgatgcccaagacattcttgcagaagct
gtgcaagttgcattcaggagtctggtagattgcatgcaagcagaattatcaacctcatta
ccaatgttcctggaagaccgagatgatgtgaacgaggaggaaggatcgacagcacacgta
ttgtcgatattatcgaacacgatggccctgctgcggaggtgtcgcgtaaacgctgctctc
accattcagttgttctcacagctcttccactttatcaacatgtgggtgttcaaccgcatt
gtggctgacccgctccccaattactgcaccagagtatggggcatccggcttaaacgtcga
ctggctcgcattgaactgtgggcggagaaacaaggcctcgagctggctgcagactgccac
ctggccaggctctcacaggctgcaatgttgctacatgcacagaagtctgcccctgatgac
atagctacaatatcatccacatgcttcaaactcaactccctccagttgcgagccttgctg
gagaaataccagcccgctccagatgagccaaggattccccaggacctcgttgataatgtt
gttgctgtggccgagagcaccgccgacggcctggcaagagaggatgggcgcgaggtgcgc
ctggaggaggagatcgacctgcagctgccgttcctgctgccagaggacggctactcgtgc
gacatcgtgcgaggcgtgccgtcagggctggctgagttcctgaaccccctccagcacgcg
gggctttgccgcatgaacccccaaccgtcctcttcgggctactggaccatttacatgcac
gaccaggagatgaggccgccgccagggccgcgaagcccgagcgtgatgagcaaccgttcg
ctttcgatcccaagaggcgagcccgagatccacgtgattcagctccacaagtccaacaac
ggcatgggcctctccatcgttgctacaaagggcgtgaaccaggacaagctcgggatctac
atcaagagcgtggtgccgggcggagctgccgaccaggacggaaggctgcaggccggcgac
cagctgctgtcggtggacggcaagtccctgatcggcatcagccaggagcgtgcggccgag
tacatgatggagacggggcccgtcgtgacgctgcaggtggccaggcaaggggccatctac
cacggcctggccactatcctgtcgcagccgtcgccgcaggtcaaccgagcctcccagcgg
aagatgcggtctcgggcggaggaggtcgggcgcgccgccgccatgactaacagccagtcc
gcgcctaacatgggcggctacaacgagcggctggtagactggaatcagcctccccgccac
caccccctccctcccacctcctcccacagctccctgatggctaggtcgagccccaacctg
gcagcggcaccagaaggttaccctggtggtcgtcacttgagtgagcgtgatctgccatct
aaagtcctccgtgagcacaaccaggaaccccctgcaccaccccttctccatcaggctccc
cgtatgcaagcatcaaagtctgtcccctcattaaatagtgaagctggtagtagtgttggg
ggaaaaccagcatcactggaggtcttcaacccttcatactctcgcacctcctcaaacacc
tctttgtcacagcctcagaacccacactttgctcaccatccccaccaacatccacaacaa
caaccacaacaccagcagcagcagcaccagcaaccacctattcgctcaaggtcaactcaa
aatctcagtgatggaagttatccaggccttgtgggtaggcaccctagcaacccaagcctt
gtggtggaggaagagcgctactatcagaatgtgaacttccatcagggtcctcaggatcct
cgcatgggctcgacacgtactcgtcccagccaaccactgcccatggggtcccctgcttcc
cagggccctcctgaacagttgcgccaggaccaccctcggcatgagccccgtagcgagcga
cctgcttcagccttcatgcagcgtgaagacatggtgccacagaggacagaaatgaccaga
cctgcttcacagcgtgacattcgtgctgatgctaagatgatggagatgacagaagaagtg
cgtcggagagaggagcgtatgcgcctcaatggtcacccacctgcatcccagcaacagcgg
ccaggcccacagcaggttcatcgtgtgccaaatgcctactccccaggaactcccttttcc
ccagagggctttaatgggcctcagggtttcccaggccagcacccaggctatcacccagcc
acatcccagcccatcagccctcaagggaccatggcaggactccagcagcagccccagcat
gctcatccccagtatgcaggtcacccacaaggcttcccaggtggcaagtttcccccacca
actgctcccaagccaaaatcacaagtacctcaggggcctctctctcctgacgctccagaa
aaacccatgcggcagtatgggtatgagggtatcaatacagatgctccccccaggcctcca
ccaccagaggatggataccgtgactctcctccccctccaccccctccaacctccacacac
cctctcttgcagaccagtcgcccagcctccaatgttggctacaacatgaactctggacaa
ggaaacaaatctgtgttcaacaagaccagcccatgggacagggaagagaaagaaagaaat
gatcgccggcgccgtgaggctgtgcgacactggcgagatgaacagatctcctctctggag
ggaatagaaaatcgtacatctcaacaggaggaaagactacgcaccttgaggcttgaaaag
gagttccagcgccgtgcagaagaaatgaataatgatgatgatgaggatgaggatgaggac
gaggacgtggaggatcgagagaatcacagagaaaatgaagatgatgtaaaatataatcaa
gagaataatgcaacaagggaatacaataagcttacaggaaatgcacctctcatcaccagt
ggccaagagccacgcatgaatgggggaggacctgtggatgaggaaagagcaagaaaggtg
gacgagatccgacggaaacagcaggagcttgaagccgccagtgaggtggaagagcgactc
ttgcgtgaagcccagaggcgacagcaggaggaacaactgagacgcttccaattgcaacaa
gagcagccacaacggcaacagcaacaacagcagcagcaacagcaacagcaacaacagcat
tcacattaccagcatcaacatcatgccactcaaagactggacactctggttggatctcca
ttccagacccagtatagtaatggtcctgtcaatggttcacgaaatctgggtggctaccct
gaacacaatcagagtactgacagcagtcatggcatggacacactagtaccaggagctcaa
cacagtccggtgcctcctgagcgagggtcatcttatagcataatgcagcagcagtcacaa
cactcttcaaacaataatcgacacaagggtcctgatggtcctcccactacaataaagcgt
gtccagttttctgagacaaccaccatggacacccacatcacttatgataacaatgcaaac
caggagaagactccaaggcaggatcctgataattttatcaatgaagcagagactcttctt
aactcctctccaaaccgcactggtggaacaccaggtgtcattggtgctcaggaagtgtac
agggatccgcgttggcgccgcctgcaagaaaagcaagcgcagcaagcagcagccaagacc
cctggccctgagaaactctctttcaaggagaagatgaaaatgtttgctatggaaactggt
gaggctgaaacacccaaagacaaagttaaaatcagccgtgctcagagagacattgaacac
tga
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