Penaeus vannamei (Pacific white shrimp): 113800946
Help
Entry
113800946 CDS
T06111
Symbol
PolA1
Name
(RefSeq) DNA polymerase alpha catalytic subunit
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
113800946 (PolA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvm03032
]
113800946 (PolA1)
Enzymes [BR:
pvm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
113800946 (PolA1)
DNA replication proteins [BR:
pvm03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
113800946 (PolA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DNA_pol_B_2
DUF1744
PP2
Motif
Other DBs
NCBI-GeneID:
113800946
NCBI-ProteinID:
XP_027207566
LinkDB
All DBs
Position
13:complement(37430486..37444533)
Genome browser
AA seq
1491 aa
AA seq
DB search
MDADGDAASPSAAESLATSRSKRSRKDKHGRFAALEKLRELKGSKHKYEVSELVNVYEEV
DEREYSQRRQDRLEDDWIVDDDGSGYVEDGREIFDDDAGEDDLFVGKKAKKGGKRKEVGG
KASSGSVGRQGAGNIKNMLINMPAKKKRAETNIRLDDDELLGDILQDLDKESDTIRPPMP
TLLKKKVPKPPSASPVNPFARPQVTTPVRVKASPKPLKPRTILDENVVNGASPKAKRSLE
VKEEPLSEQIDEFDSMDVMDMDFDDEDVENMEAMLVNEEKKAAIKLEKEEPKEELKEVKE
EPQVKEVKAEVKTQVNRGFTAKPKVDVAQVTTGWETVKDEVKDASIVQDVQIDASKLPLT
TNSEGEQVLRFYWLDAYEDIYKQPGTVYLFGKVWIESAQTHTSCCVAVKNIERRLYILPR
TKRMDLKTKEESEDPVGMMEVYQEFNSTVVQKYKILEFKSKKAKKNYAFEKFDVPNTADY
LEVRYSASLPALPSDICGETFSHVFGTNTSPLEIFLLDRRIKGPCWLDIKFPQLPSPVVS
WCKVEAVAVKPDHVSVVAGLVPPPVVVMTMGMRTTVNPKTHQNEIAMVSCLVHQDFPLDK
AAPQPPFQLHFCAMSHPSDVTWPWDLKDALPRYRSTKIEKMETERALLGFLLAKIHKIDP
DIVVGHDIYGFDLNVLLHRVNANKIPHWSRLGRLRRTQMPKLTGRGFAERSAMCGRLVCD
VKLSSMELIRAKSYELAPLVNQVLRIPESECKTLTVDEVKKMYESSSSLLQLVTMTMQDA
SYVLRLMCELNVLPLALQITNIAGNVMSRTLLGGRSERNEFLLLHAFTEKNFIPPDKHYG
KANQKVDIDEDHADGEETGGKRNKGRRKPAYTGGLVLDPKKGFYDKFILLMDFNSLYPSI
IQEYNICFTTMAREFKEENKEGEEEVLPDLPDPELEAGVLPTEIRKLVESRRQVKQLMKQ
PDISNDLKLQYDIRQKALKLTANSMYGCLGFSYSRFFARHLAALVTGKGREILLHTRDLV
RKLNFDVIYGDTDSIMINTNCTDYEQVQKLGHKIKSEVNKLYKLLELEVDGVFKYMLLLK
KKKYAALTVTKLPNGQTLEEQELKGLDIVRRDWSQLASDCGRHIVQQILSDQGPDERIEN
IHSHLEKLKNDLNDGKIGLDLLSITKSLTKNPEDYPDKKSLPHVQVALRMNSRGGKKLRQ
GDTVQYVICEDGSNLAATQRAYHVDELKTNSALVIDKNYYLAHQIHPVVSRLLDPIEGTD
AARIAECLGLDPSGYRVSKQYGHGEEEEDMSTTEIPDEERYRMCERFTFQCPGPECDTII
TMDSPFRGVGTGMNLEVALQNCPNPKCNFPIYSRLAPIINKLNLDIRKHIIKYYNGWLIC
EDPGCSNRTRRIPLRFSRGFPICNACEKGVLFREYTESQLYKQLCFYDYIFDFQKACQKN
KDERIRDDTLRKAYNILQTEVQKKLKHNAYSEVNLTKLFGSLMAKSQTRVS
NT seq
4476 nt
NT seq
+upstream
nt +downstream
nt
atggatgctgacggggacgcagcatctccatcggctgcagaaagcttggcaacctctcgt
tccaagcgatctcgcaaagacaaacatgggcgatttgcagcgcttgagaaactacgtgag
ctgaagggatccaagcataaatatgaagtctctgaactagtaaatgtatatgaggaagtt
gatgaacgggagtactctcagagacgtcaggatcgcctcgaagatgattggattgttgat
gatgatggttcaggctatgtggaagatgggcgagaaatatttgatgacgatgctggtgag
gacgatctttttgttggcaagaaggcgaagaaaggtggaaaacggaaggaagtgggtggt
aaggcttcttcggggtccgttgggaggcaaggagcgggaaacattaaaaatatgctcatc
aacatgcctgcgaaaaagaagagagctgaaactaatatccgcctggatgatgatgaatta
ctgggagatattctgcaagaccttgataaggagtctgacaccattcgaccacccatgcca
acgctgctcaagaaaaaggtgccaaaacctcccagtgcatcacctgtcaacccttttgct
agaccacaggtgactaccccagtgcgagtgaaggcctcacccaaacccctgaagccaaga
accattttggatgagaatgtagtcaatggggcatcaccgaaggccaaaagatctctagag
gtgaaggaagagcctctctctgagcagattgatgagtttgattccatggatgtcatggat
atggactttgatgatgaagatgtagaaaatatggaggcaatgctagtcaatgaagagaaa
aaagctgcaataaaattggaaaaggaagagccaaaagaagagttgaaggaagtgaaggaa
gaaccacaagtgaaagaagtgaaagcagaagtgaagacccaagtgaatagaggatttact
gccaagccaaaggtagatgttgctcaagtcacaactggctgggagacagttaaggatgaa
gtaaaagatgctagcattgtgcaagatgtccagattgatgcttctaaactaccactgacc
accaacagtgaaggagagcaggttctcagattttattggttggatgcctatgaagacata
tacaaacaaccagggacagtgtacctgtttggtaaggtttggattgagtcagcacagacc
cacacaagttgctgtgtagcagtcaagaacattgagagaagactttatatacttccccgt
acaaagcgtatggacctcaaaacgaaagaagagtcggaggacccagtaggcatgatggaa
gtctaccaagaatttaactcgactgttgtccagaaatacaaaattttggagttcaagagt
aaaaaagccaagaaaaattatgcatttgaaaagtttgatgtgcccaatacagctgattat
ttggaagtccgatattctgccagtctcccagcccttccatccgatatttgtggtgaaact
ttcagccatgtgtttggtacaaatacctcccccttagaaatcttccttttggaccgccgg
attaaaggaccatgctggttagatatcaagttcccacagttgccatcaccagttgtctcc
tggtgcaaagttgaggctgtagctgtcaaaccggaccatgtgtctgttgtcgctggtctg
gttcctcctccagttgtggtgatgacaatgggtatgcgaaccactgtcaaccccaagact
caccagaatgagattgcaatggtgtcttgccttgttcatcaagattttcctcttgacaag
gcagcaccacaaccacccttccagttacatttttgtgcaatgtcacatccctctgatgtc
acatggccttgggacctgaaggatgctttgcctagatacaggtcaactaaaattgagaaa
atggaaacagaaagagctctcctgggatttttactggccaagatccacaaaattgatcca
gacattgtggttggtcatgatatttatgggtttgaccttaatgtcctgcttcatcgtgta
aatgccaacaagattccacactggtcccgtcttggtcgtctgaggcgtacacagatgcca
aaattaaccggcagagggtttgcagagaggtcagccatgtgtggtcgtttggtatgtgat
gtaaaactttcttcaatggaactcataagagccaaaagttatgaacttgctcctttggtg
aatcaagttctacgcattccagagagtgagtgcaagactttgacagtggatgaagtcaag
aagatgtatgaatcatcatcatcattactccagcttgtaaccatgacaatgcaagatgca
tcatatgtcctccgcttaatgtgtgagctgaatgtacttccactggcactacagataaca
aatattgctggaaatgtaatgtctagaactctacttggtggacgctctgagagaaatgag
ttcctcttgctacatgcgtttactgagaagaatttcattcctcctgacaagcattatggg
aaagctaatcaaaaggttgatatagatgaagaccatgctgatggagaggaaacaggaggg
aagaggaacaaagggcgtcggaaacctgcctacactggtggtctggtgctggacccaaag
aaaggattttatgacaaatttattttgctcatggacttcaactctctgtatccaagcatc
attcaagagtacaatatctgctttactactatggctagggaattcaaagaggaaaacaaa
gagggagaggaagaggtcctgccagatttgccagacccagagctagaggctggcgttctc
ccaacagaaattcgaaaattggttgagagcagaagacaagtaaaacagctcatgaaacag
ccagatatttcaaatgatttgaagttgcagtatgacattcgccagaaggctctgaagtta
acggcaaacagtatgtacggttgcctaggcttttcatactccaggttctttgcccgtcac
ttggctgctcttgtcacaggaaaaggacgagaaattttattgcataccagagaccttgta
cggaaactgaactttgatgtcatttatggagacactgattccatcatgatcaacactaat
tgcacagattatgagcaagttcagaaacttgggcataaaattaagtcagaggtaaacaag
ttgtataagctccttgaacttgaagtagatggcgttttcaagtacatgctgctgctaaag
aagaaaaagtatgctgccctcacagttaccaagcttcccaatggtcagacattggaggaa
caagaattgaagggtcttgacattgtgcggagagattggtctcaacttgcctctgattgt
ggaagacatattgtgcagcagattctttctgaccagggacctgatgagcgtatagagaac
attcattcacacctggagaagctaaaaaatgatctcaatgacggaaagattgggctggat
ttacttagcatcacaaagtccttaaccaagaacccagaagactatcctgataagaaaagt
cttcctcatgtccaagtggcacttcgcatgaactctcgaggagggaagaaactgcgtcaa
ggagatacagtacaatatgtgatctgtgaggatggaagtaatttggctgctacgcaaaga
gcttaccatgtggatgagttaaaaaccaactcggctttagtcatagacaagaactactat
ttagctcatcagatacatcctgtagtttctcgtcttcttgaccccattgagggaacagat
gcagctagaattgctgaatgtcttggccttgatccatctggatatcgagtttcaaagcag
tatggacatggtgaagaagaggaagacatgtcaacaacagaaataccagatgaagaacgg
tatcgtatgtgtgagagattcactttccagtgtcctgggccagagtgcgacaccatcatc
accatggactcacccttccgaggagtgggaactgggatgaatttagaggtggctctgcaa
aactgtccaaaccctaagtgcaatttcccaatttattctcgccttgcacctattatcaac
aagctgaacttagacataagaaaacatatcatcaagtactacaatggctggctgatctgt
gaagaccctggatgcagcaacagaactcgccgcattcccctacgtttctcccgaggattc
cctatctgcaatgcctgtgaaaagggagttcttttcagagagtacacagagtctcagctg
tataagcaactgtgtttctacgattacatctttgacttccaaaaagcttgccagaaaaac
aaggatgaaagaattcgtgatgacacactaagaaaagcctacaacattctacagaccgaa
gtccagaagaagttgaagcacaatgcatattcagaggtcaacttgaccaagctgtttgga
agcctcatggccaaatcacagactagagtatcttga
DBGET
integrated database retrieval system
