Penaeus vannamei (Pacific white shrimp): 113800972
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Entry
113800972 CDS
T06111
Name
(RefSeq) protein slit
KO
K06839
slit 2
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pvm00536
]
113800972
Glycosaminoglycan binding proteins [BR:
pvm00536
]
Heparan sulfate / Heparin
Axon guidance molecules
113800972
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
Laminin_G_1
Laminin_G_2
EGF
LRRNT
LRR_1
LRR_9
hEGF
EGF_TEN
LRRCT
LRR_LRWD1
LRR_EndoS
EGF_DL_JAG
EGF_2
LRR_Zer-1
EGF_3
Motif
Other DBs
NCBI-GeneID:
113800972
NCBI-ProteinID:
XP_069977495
LinkDB
All DBs
Position
4:complement(24294027..24347334)
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AA seq
1316 aa
AA seq
DB search
MRELNRNQLKIIGKKLLKGLAQLRYLQLDENQITCIDEQAFKGLSLLEILTLTNNNITTV
WRGTFETTPRLRALRISGNKLICDCHLAWLGRMLAAAPHLAPYVRCSSPYRLKDRLVTEV
LDQEFKCTGLVDSVDRGCSLAPVCPRACRCGVGIVDCRDTGQTHVPTHIPDDTIELRLEH
NEIRHVPSKIFTPYRLLKRIDLSNNEISEVAEDAFHSLSNLNSLVLYGNKITTISPRVFR
GLANLQLLLLNANQIECVHPEAFKDLRKLSLLSLYDNKIMSFGNGTFGPLVNIQTMHLGA
NPFVCDCNLAWLASYLSENPIETSGARCQEPAKLSRKPFNRLKQESFKCTNELRSRYNGR
CNEADLCPAQCRCEGTRLDCSGRDLTSLPSDIPTATTHLDLSYNQLFSLDGSTSLAELKE
LTHLDLSHNRLTSLSPDFFRGTRALTHLNVSQNKLVQMPESVTRRLKALTQLDLSGNHIS
CISRRISSHLPRLSKLDMSANPLNCDCRASWLSEFVAVHEGSTPPTCHLPESLRDTLVTE
LQESQLTCREDENNEDDCAGSVYCPPECQCHGTVVRCSRSHLTQIPRGIPPDTTELYLDV
NEIKSVDPERLKHLKVLKRLDLSNNQITILSNKTFSELKQLSTLIVSYNKLGCMERDALL
GLKALRILSLHGNDVSFIPEGTFRDLNTITHIALGANPLYCDCSLAWLAKWVKGDFVEPG
IARCADPRPMRDKLVLTTPPEMFTCTEKVPDDILAKCDLCYTRPCQNGGTCRSGPGQQYE
CRCAAGFHGPECQYKIDACYGNPCDNGGTCKVFETGRYACHCPTGFEGGRCEVNVDDCEG
HKCANNAVCVDGINSYSCTCPPGFMGEYCERKISFCSKEFNPCKNSATCVDHGTGYECQC
ALGWSGNNCTENLDDCANHMCQNGGQCIDGVGDYECKCTGDWSGRYCELGPSVLLQTEPC
LQHDCRHGVCVVPRGKMEYVCKCSPGYSGKYCQHMTSVNYIDSSSFIQLITPPFRPSINV
TISFTTRSPNGVLVYHGKERKHLAVEVFKGRLRISYDVGNHPASTMFSYELVSDESEHTV
ELLSERQNFTLRVDGGVARSMVNAGDLEYLEVDTPLFLGGVPPDVARHAQAQWHLRNSTS
FQGCMSRVVVNGRVQDFAESEKQNKVVPGCGDAEQRDQEVDRMNQKVTTTPRTNRRKSSK
TDKDACAASECVNGQCRPRRKGGYRCRCKKGWSGKLCNQAPSCSKEAEKAYVYDYGCRSR
RPIRQFTCKGSCGSDCCEPKRYRQKRVAMICNDGTKYMKEVDIVRKCRCSRGCRGI
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
atgagagagcttaaccggaatcaactgaagatcattggcaagaaattgctgaagggactt
gcgcaactcagatacttgcagctggacgagaatcagataacatgcatcgacgagcaggcg
ttcaaggggctcagtctgctggagatcctgactctgacgaacaacaacatcacgaccgtg
tggcgtggcaccttcgagacgacgccgcgcctgcgcgcgctcaggatctcgggcaacaag
ttgatctgcgactgccacctggcttggctgggccgcatgctggccgcggcgccgcacctc
gccccctacgtgcgctgctcctcgccctatcgcctcaaggaccgcctcgtcacggaggtg
ctcgaccaagagttcaagtgcaccggcctggtggacagcgtggaccgcggctgctcgctg
gcccccgtgtgcccccgggcgtgtcgctgcggcgtcggcatcgtcgactgtcgggacacc
ggccagacccacgtgcccacgcacatccccgacgacaccattgaactgcgcctggagcac
aacgagatccgacatgttccctccaagatcttcacgccctaccggctcctcaaacgcatc
gacctcagcaacaatgagatctccgaagtagccgaggacgccttccacagcctcagcaac
ctcaactccttggttctctacggaaacaagatcaccacgatctccccgagggtcttcagg
ggcctcgccaacctccagcttctgttgctcaacgccaatcagatcgagtgcgtccatcct
gaggccttcaaggacctacggaagttgagccttttatctctctacgataataagatcatg
agctttggcaacggaacatttggtcctcttgtaaacatccagactatgcatctgggagcc
aatccgtttgtgtgtgactgcaacctggcttggctggcgtcctacctgtccgaaaacccc
atcgagacgtcgggagctcgctgtcaggagccagccaagctctctcggaagcccttcaat
aggctgaagcaggagagtttcaaatgcaccaatgaattacggtcccgctataacggtcgc
tgcaacgaggccgacctttgtcctgctcagtgtcgctgcgaagggacgcggctggactgc
tcgggccgtgacttgacatctttgccctcggacatacctacagccaccacccaccttgac
ctgagttacaaccagctcttctcacttgatgggtccacaagtcttgctgagctcaaggaa
ctcactcacctcgacctctcccacaaccgcctcacttccctcagcccggatttctttagg
gggacaagagcactcacgcatctcaacgtctcccagaacaagctggtacagatgcctgag
tccgtaacgcgaaggcttaaggccctgacccagctggacctttccgggaaccacatctct
tgcatctcgcggcggatcagtagtcaccttccacgtctgtccaagctggacatgtcggcg
aaccctcttaactgcgactgccgcgcctcatggctgtctgagttcgtggcggtgcatgag
ggctcgacgccccctacctgccacctgccagaaagcctcagagacacgctagtcactgag
cttcaggagtcacagctcacgtgcagggaagatgaaaacaacgaggatgactgtgcgggt
tctgtgtactgcccccctgagtgccagtgtcatggcactgtagtgaggtgctcgcggtcg
cacctcacccagatccctcggggcataccgccggacaccaccgagctgtatttagacgtc
aatgagataaagagcgtcgacccagagaggctgaagcacctcaaggttcttaaaaggcta
gacctcagcaacaaccagatcaccatactctccaacaagaccttctcagagctcaagcaa
ctctccacgttgattgtgtcatataataaacttggctgtatggagagggatgccctgctc
ggactcaaggccctgaggatcctctccctgcacggcaacgacgtctcgttcattccagag
ggaacgttccgagacctaaacaccatcacgcacattgcactgggagccaatccgctctat
tgcgactgttcgctagcttggctggccaagtgggtgaagggcgactttgtggaacccgga
attgctcgttgcgctgacccacgacccatgcgggacaagttggttctaacgacccctccg
gaaatgttcacttgtacagagaaagtaccagatgatatactcgcaaagtgtgacttgtgt
tacactcgaccgtgtcagaacggagggacatgtaggtcaggccctggtcagcagtatgaa
tgtcggtgcgccgctggcttccacgggccagagtgccagtacaagatagatgcatgctat
gggaacccctgtgacaatggcgggacttgcaaagttttcgagaccgggagatatgcgtgc
cactgtcccaccgggtttgaaggaggccgatgcgaggtgaacgtcgacgactgcgagggc
cacaagtgcgccaacaacgccgtctgcgtcgacggcatcaactcctactcgtgcacttgc
ccgccgggcttcatgggcgaatactgtgaaaggaagatttccttctgctcgaaggaattc
aacccttgcaagaatagtgccacctgtgtcgatcatggcacggggtatgagtgtcagtgc
gcccttggctggtctgggaacaactgcacagaaaacctagacgattgtgccaaccacatg
tgccagaatggcggccagtgcatcgacggcgtcggcgactacgagtgcaagtgcaccggg
gattggagcggcaggtactgcgagctcggcccctccgtgctgctgcagacggagccgtgt
ctccagcatgactgtcgccacggcgtgtgcgtcgtgccaagggggaagatggagtatgtt
tgcaaatgttcgcctgggtactcaggaaagtactgccagcacatgacttccgtcaactat
atagattccagcagctttatccagctgattacgcctcccttccggccctccatcaacgtg
accatcagcttcacgacgcggtcgcccaacggcgtcttagtgtatcacggaaaagagcgg
aagcatctcgctgtcgaggtgttcaaagggcggctcaggatcagctacgatgttggcaac
cacccagcctccacgatgttcagttacgagctagtaagtgacgagtccgagcacacagtc
gagctgctgtcagagcgtcagaacttcactctgcgcgtggacggcggcgtggcgcggtcc
atggtgaacgctggagacctggagtacctcgaagtagacacgcctctgttcctgggcggt
gtcccccccgacgtggccagacacgcgcaggcgcagtggcatctgaggaactccaccagt
ttccaaggttgcatgagcagagttgtagtgaatggtcgagtgcaagactttgcggagagt
gagaagcagaataaagtggtgcctggatgcggtgatgctgagcaacgcgaccaagaggtt
gacaggatgaatcagaaagtaacaaccacgcccagaactaacaggcgcaaaagttccaaa
acagacaaggacgcgtgcgcggccagcgagtgtgtgaacggccagtgccggccgcgacgc
aagggcggatatcggtgcaggtgtaagaagggctggagtggcaagctctgtaaccaagcc
ccctcatgcagcaaggaggcggaaaaggcctacgtgtatgactacgggtgccgttcgcgt
cgcccgatcaggcagttcacgtgcaagggatcctgcggcagtgactgctgcgagcccaag
cgatatcggcagaaacgcgtggccatgatctgcaacgatggaacaaagtacatgaaggaa
gtggatattgtgcgaaaatgtcggtgttcccgaggttgcagaggcatataa
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