Penaeus vannamei (Pacific white shrimp): 113801794
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Entry
113801794 CDS
T06111
Symbol
SerRS-m
Name
(RefSeq) serine--tRNA ligase, mitochondrial
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
113801794 (SerRS-m)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pvm01007
]
113801794 (SerRS-m)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvm03016
]
113801794 (SerRS-m)
Enzymes [BR:
pvm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
113801794 (SerRS-m)
Amino acid related enzymes [BR:
pvm01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
113801794 (SerRS-m)
Transfer RNA biogenesis [BR:
pvm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
113801794 (SerRS-m)
Prokaryotic type
113801794 (SerRS-m)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Motif
Other DBs
NCBI-GeneID:
113801794
NCBI-ProteinID:
XP_027208029
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All DBs
Position
5:complement(7612409..7634355)
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AA seq
450 aa
AA seq
DB search
MYHRTMYMRCVQNILQHSWIRKRIPVPLVRRIFTDTNDERTVTRSFGLDYEYLCNPENSS
DIEELIKKRKGVGDIRKVVELSKKLQSQNMTTEEYTALETELEKAALMIPNKASPHLFEY
GETPKVIEYVNSKPDFSFKPREVHELGKDLDIIRMENLGNLTGPRSYYLRGALADLEQAL
IRYTVSSLLKRGFVLMSVPDLLYSHIIEGCGMSTRGQRTQVYHIADSEDVCLSGTAEMAI
GGYLKNREFSLKELPLKLAAVSRCYRAETSSLREEKGIYRVHGFTKVEMFGVTAAESKEE
SHQLYSEMTEIQKELFSSLAIHFQILDMPLHELGAPAFTKTDMEAWMPGRGAYGEISSAS
NCTDYQSCRLNISYRNKEGVQKLAHTVNGTACAIPRSLIAICETHQTEEGHIRIPPVLRP
YMSGLETIIPSASQCQMSWIKQKTYPGKIR
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgtatcacaggaccatgtatatgagatgtgttcagaatatactgcaacattcatggata
agaaaaagaatacctgttccactagtgagaagaatatttacagacaccaatgatgaaaga
actgtaactagaagttttggacttgattatgaatatttgtgtaatccagaaaattcatca
gatatagaggagttgattaaaaaaaggaagggtgtgggagatattaggaaagtggtagag
ctgagtaagaaattacagtcgcagaatatgactactgaggaatatacagcattggaaaca
gaattagaaaaggcagcattgatgattccaaacaaagcaagtcctcatctgtttgaatat
ggagaaactcccaaagtcattgaatatgtcaactcaaaaccagatttcagttttaagcca
cgtgaagtacatgagcttggtaaagatttagatattattcgcatggagaatttgggaaat
ttaactggccctcgtagttactacttaagaggtgcattggcagaccttgaacaggcgtta
ataagatacacagtatcatcattactgaagagaggctttgttcttatgtctgtccctgac
ctgttgtattcacacattattgagggatgtggcatgagcacccgaggtcagcgtacgcag
gtttatcatattgctgactctgaagatgtatgtctgtcaggaactgcagagatggcaata
ggtggatatttgaaaaatagagaattctcccttaaagagcttcctctcaagttggcagct
gtttcaagatgctacagggcagagacttcctcacttcgggaagagaaaggaatatataga
gtacatggatttacaaaagttgaaatgtttggagttacagcagcagaaagtaaagaagaa
agccatcagctatattcagaaatgacagagattcaaaaagaactattctccagcttagcc
atccatttccagatattagatatgcctctccatgaattgggtgctccagcttttacaaaa
actgatatggaagcttggatgcctggaagaggagcctatggagaaatatcttcagcatca
aattgcacagattaccaaagctgtcgtctcaatatatcttacaggaacaaggagggagtc
caaaaattggctcacactgtcaatggaacagcatgtgccatacctcggtccctgattgcc
atatgcgagactcatcaaactgaagagggacatatccgtatcccacctgtcttacgccca
tatatgtcaggacttgaaaccattataccctcagccagtcagtgtcagatgagttggatc
aagcagaagacttatccaggaaaaattagataa
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