Penaeus vannamei (Pacific white shrimp): 113802078
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Entry
113802078 CDS
T06111
Name
(RefSeq) uncharacterized protein isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
113802078
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvm03009
]
113802078
Ribosome biogenesis [BR:
pvm03009
]
Eukaryotic type
Pre-60S particles
RNases
113802078
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
WD40
CHORD
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
REX3_middle
Beta-prop_TEP1_2nd
zf_Tbcl_Rhp7
Motif
Other DBs
NCBI-GeneID:
113802078
NCBI-ProteinID:
XP_027208341
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All DBs
Position
10:complement(12494041..12519714)
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AA seq
649 aa
AA seq
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MMAGEETDVSSAPTMLFLSIVIGATILVLAWLIRLSRSQTNNTAEKTSKPKRKEPQVTKK
PPPPKKQAKITKKAVVTQYTHQELITTLKGHTGSITGGSFSSDGKHFITAADVGSGRRFD
PGGRSGKASCNANLFSIEDSLDLSSISDGSSSLEEVDTSSVSSSSQMANSNAPSDTEEVI
MVCNPSKMSRRQRKNKNKRAKMNRVGSSAGRNTATKAISQSTKTLFDSLEKTEEQLYDLL
VPKCCVLEERVLNGYPYATNHGLYIFKPNGYTTLAGVLNGCELLEVELDATEREDLHKTL
DVESSSDYSEPESLEDLSVGDTYQDDNHESSSGVSSDSKDSEVDIEGNYGNEINSNFSEF
RNSTGSIDLNFDSKHATLQMNFNKLQQIEKCKRCRKHFSVSENGSDVCEYHPKKMVLRRD
GRLHYQCCNRMKGVAGCTQTYYHVFHHFRSGLNGPLEGFVNTKDGSPRIFGLDCEMIFTS
KGFELARLTLVCVSGKVVLDLYVKPFGEVFDYNTKFSGITAEHIERAISFTEARERLLRV
VSSSSILIGHSLEGDLAALKLIHRNVIDTALLFKPPPSSPTLNGPLMHKQSLKSLAKRHL
GRDIQKGGSHGHDSLEDATAALDLVLNNIKESLFFRSKVAPLPLALQNM
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgggagaggagacagacgtctcgtccgctccgacgatgttgttcttgtcaata
gtaataggggctactattctggtcctggcgtggctaattcgcctatcaagaagccagact
aacaatacagcagagaaaacaagcaagccgaaacgtaaggagccccaagttaccaaaaag
cctcctcctcccaaaaagcaagcaaagatcacgaagaaagctgttgtgactcagtacaca
catcaagaattgataaccactctcaaaggacacactggcagcatcactgggggaagcttc
tcatctgatggcaaacacttcataactgctgcagacgtggggagtggcagacgctttgat
cctggtggcagaagtgggaaggcgagctgtaatgcgaacctattctctatagaagattct
ctggatctgtccagtatatcagacggcagcagcagtctggaagaagtggacacctcgtct
gttagtagcagcagtcagatggcaaacagcaatgctccatctgatacagaagaggttatc
atggtgtgcaatccttcaaagatgtcccggcgccagcgtaagaacaagaacaagagggca
aaaatgaacagggttggatcatcagctggccgcaacacagcaacaaaggctattagtcag
agcaccaaaaccctgtttgatagccttgaaaagacagaagaacagctgtatgacttactt
gttccaaaatgttgtgttctagaggaacgagtccttaatggttatccatatgctacaaac
catgggctttacatttttaagcctaatggttacacaacattagctggagttctaaatgga
tgtgaactcctagaagttgaactggatgcaacagaacgtgaagatctacacaagacgcta
gatgtagaaagtagttcagattactctgaaccagaatccttagaagatttaagtgttggt
gacacatatcaggatgataatcatgaatcctcttcaggggttagttctgacagcaaagat
agtgaggttgatatagaagggaattatggaaatgaaattaattcaaattttagtgaattt
aggaacagtacaggaagcatagatttaaattttgattcaaaacatgctacattgcaaatg
aactttaataaattacaacaaatagaaaagtgtaaaagatgtaggaaacatttcagtgtt
agtgaaaatggaagtgatgtgtgtgaatatcatccaaagaaaatggtgttgagaagagat
ggaagattacactatcagtgctgtaacagaatgaaaggtgtagcaggatgtacccagact
tattatcatgtatttcatcacttcagatctgggctgaatggtccattagaaggatttgta
aatacaaaggatgggtctccaagaatatttgggcttgactgtgaaatgatatttacaagc
aaaggatttgaattagcaagattaacattggtatgtgtgtcaggaaaggttgtgttagac
ctctatgtcaagcccttcggtgaagtatttgattacaacaccaaattttcaggaatcaca
gctgagcacatagaaagggccatatcatttacagaagctagagagagattgttgagagtg
gtttcatcatcttcaatccttataggacatagcctagagggtgacttggctgccctaaag
ttaattcaccgtaatgtcattgacactgccttgctcttcaagcctccacccagctcccct
accctgaatggtccattgatgcataagcagtctctgaaatcactggccaaaagacatctt
ggacgtgacattcaaaaaggagggagtcatggacatgacagccttgaagatgctactgcg
gccttagatttggtactgaataacatcaaggaatctctctttttcaggtctaaggttgcc
ccattaccacttgcacttcagaatatgtga
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