Penaeus vannamei (Pacific white shrimp): 113802098
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Entry
113802098 CDS
T06111
Symbol
Gat
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 1
KO
K05034
solute carrier family 6 (neurotransmitter transporter, GABA) member 1
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
113802098 (Gat)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvm02000
]
113802098 (Gat)
Transporters [BR:
pvm02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
113802098 (Gat)
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
113802098
NCBI-ProteinID:
XP_027208361
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Position
23:complement(11234024..11302356)
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AA seq
640 aa
AA seq
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MEGDEKNKSKSAGGGGGGGGGGGGGDGGGMEMSQYGLNGTSLPQTPNDAGQVAATAEHTL
RGTWSNHLDFILSLVGNAIGIGNVWRFPYVCYKNGGGAFLIPYVLTVLCCGVPTFFLEVS
MGQYFGTGGLTVWRITPIFKGVGYGAAVMSVWLNIYYIVVLCWALFYFFQSLTSQLPWGS
CNNWWNTETCVSPYARNSLECWDESYNSTANETFCTVGNLTRVSVLNITDPVKEYWEKRA
LQISEGIDHPGTVRWELALTLLLAWILCYFCIWKGVKWTGKVVYFTALFPYVLMVILFIR
GVTLPGAMTGIRFYLIPDIAKLADITVWVEAVSQVFWSYALVLGSLIALGSYNKFDNNCY
KDSLILCTINSCTSFFAGFVIFSVVGFMAEAQQKSVADVAASGPGLAFLAYPTAVLQLPV
SPLWSALFFLMVLMLGLDSQFCTIEGFITAVSDEWPKYLRKHKELFILIVCVLSYLVGLS
CVTEGGMYVFQVLDTYAASGMCLISLIMFECLAISWGFGADRWYDCVKEMIGYYPFFWWK
LCWKFITPITCFSVFMFNVVIWSPPKYVNYEFPGWTHFVGWLMALSSMLCVPGYAIYKFI
TSPHPGTWKERLLAITKPELDLEALKNKYTSASMQEATAV
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgacgagaagaacaagagcaaatctgcgggaggcggtggaggtggcggagga
ggaggtggaggaggcgacggaggaggcatggagatgagccagtacggcttgaacggcacg
tcgctccctcagacgcccaacgacgccgggcaagtggccgccaccgcggagcacaccctg
cgaggcacctggtccaaccacctcgacttcatcctctccctcgtcggcaacgccatcggt
attggcaatgtgtggcggttcccttacgtctgctacaagaacggtggcggtgccttcttg
atcccctacgtgctgacggtgttatgctgcggcgtccccacgttcttcttggaggtgtcc
atgggccagtacttcggcacgggcggccttaccgtgtggaggataacacccatcttcaag
ggtgttggctatggcgccgccgtcatgtccgtatggctaaacatctactacatcgtcgtc
ttgtgttgggctcttttctacttcttccagagtctcacttcccagcttccgtggggctcg
tgcaacaactggtggaacactgagacctgcgtgtccccgtacgcccgcaacagcctcgaa
tgctgggacgaatcctacaactccaccgccaacgagaccttctgcaccgttggcaacctt
acgagggtcagcgtgttgaacatcaccgatcccgtcaaggagtattgggaaaaacgggct
ctgcaaatttccgaaggcattgatcacccaggcaccgtccgctgggagttggccctgact
ctcctcctggcttggatcctctgttacttctgcatctggaagggagtcaaatggactgga
aaggtggtgtacttcacggccctgttcccgtacgtactcatggtcatcttgttcatccgt
ggcgtgactcttccgggcgccatgacaggcattcgcttctacttgatccctgacatcgct
aagctggcggacatcacggtgtgggtggaagcggtgtcacaggtgttctggtcctacgct
ctcgtgttgggctcgctgatcgctctcgggtcctacaataaatttgacaacaactgttat
aaggactcgctcatcctctgcaccatcaactcctgcacgtccttcttcgccggcttcgtc
atcttctccgtcgtcgggttcatggcggaggcgcagcagaagtccgtagctgacgtggcc
gcttcaggacccggtctggcgttcttggcgtacccgacggcggtgctgcagctgcccgtg
tctcccctgtggtccgcgctcttcttccttatggtactcatgcttggactcgactctcag
ttctgcacgatcgagggcttcatcacggccgtgtctgacgagtggccaaaatacctgcgc
aaacacaaggaactctttatcctgatcgtgtgtgtcctttcctacctggtcggcttgtcg
tgcgtcacggagggcggaatgtacgtgttccaggtcctagatacctacgccgcctccgga
atgtgtctcatctccctgatcatgttcgagtgcctggcgatcagctggggcttcggcgcc
gacaggtggtacgactgcgtcaaggagatgatcggatattaccccttcttctggtggaag
ttgtgctggaagttcattacgcccatcacttgcttcagcgtgttcatgttcaacgtggtg
atctggtctcctcccaagtacgtgaactacgaattccccggctggacccacttcgtcggc
tggctcatggcgctgtcctccatgctgtgcgtcccgggctacgccatctacaaattcatc
acctccccccatcccggcacctggaaggagagactattagcaatcacaaagccggaactg
gacttggaagccttgaaaaacaagtacaccagcgccagcatgcaggaggccaccgccgtg
tag
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