Penaeus vannamei (Pacific white shrimp): 113802277
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Entry
113802277 CDS
T06111
Name
(RefSeq) prominin-1
KO
K06532
prominin 1
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvm04147
]
113802277
04090 CD molecules [BR:
pvm04090
]
113802277
Exosome [BR:
pvm04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
113802277
CD molecules [BR:
pvm04090
]
Proteins
113802277
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prominin
Tweety
DUF7491
Ni_hydr_CYTB
COG6_N
SUR7
COG3_N
Casc1_N
Motif
Other DBs
NCBI-GeneID:
113802277
NCBI-ProteinID:
XP_069983704
LinkDB
All DBs
Position
12:complement(5027259..5061433)
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AA seq
1059 aa
AA seq
DB search
MGHWQPLELGTAGPDSLERGQQRHTYLGRKKELCREGGREAAAAKRGFLTLGIWRDFREE
QMAGELHKRRRSTSPALDVAGGASGRSCSRRHLIPPGTNPKFMIFGEVATDGDDDDAIDQ
HNSYRRITIFSVITIIIISRLCQGVTLGILQVPHTNPRFSPPSGAVVSQELAQPSFDRQQ
AMRVVSELEANWDVLVIHYIGLVSLVVLGALMVVVMPFSGLVFACCRCAGRCGAQEPHYD
KKRDPCKRVTLGTFLATLVVVILLGLVCTFVTNARIEDGVQKLPRELRTALHDTKLFLNN
TDSEVQNLLVSNYRELQDVLFNKLDSSGELVKSELARVTKAVAIDNLTAIVTSLSAIKKD
LWTIKNTTLQLQDQTSNLQSGLGDVARRLRELQESCEALPDCQELITQYADQLRINNEFD
QYLETDVLPQLPNVESKLDEVKSLIENDIEIAVKRGKRAFDSIATEIQNKVQRSIPEIKA
KILDAGGELEDAAESIHRTLQRVDTKPKETETYIRLLQDGINEYAMYRYWGFMGLCILLL
VITLCFTLGVVFGCCGRRPDEASSCHKATGASWLMCGVGLTFLFSALIMAATTALFVLGS
ISEILVCDPLADPTHSEVFNAAAELYNLNNHYPPGQAPSITEIISKCHNNQSLYSVLSLN
HVDSNLARLQDYKKNLNLDEKIEQLMLQITVDTDVEILSRNAKERLWELANSSVADKDTW
DYYTEILEKRVLKIDLMDLAALLNQTADQLPTGYDQVSFKLKNDALFLEGLQRWVSSIGH
LTRNLNKTTARLNEHLKFNKTSLREAIGDLISQAEFAQQYLRINGSREVTELVERFSKDF
LADVDEYVLHVETAVENDVGRCGPVSTVYNATTSSLCKDIMYPFNGFWASVGWVFIFFIP
AMILAVYLSSLYRKTEPYPGPLNESEYLYDAYDERNSFPMSNQESMYDAYAERDNIPLTT
SGYDKKQRRRSREYEGHVGSSYATDQAYGGSRMSPPRIEYTNPTDWADYPPGGGPPRYSS
QPSLSPEYERPPPYYYPGPGARPTALTYRSNRLDLDSDA
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgggacactggcagccgctggaactcggtacagcgggtcccgacagcctggaacgcggc
caacaaagacacacatatctgggacgtaaaaaggagctgtgtagggaaggcgggagggag
gcagctgcggccaagaggggatttttgacgctggggatctggagggattttcgggaagaa
caaatggcgggcgaattgcacaagcgacggcggtcgacttccccggcgctggatgttgct
ggcggggcctccgggcgaagctgtagccgacggcatttgatccccccgggaactaatccg
aaattcatgatattcggggaagtggcgacggatggtgatgacgacgatgcaattgatcaa
cataacagctatcgtcgtattaccatttttagtgtcatcaccatcatcattatttcacgc
ctgtgtcagggcgttacgctaggtatacttcaggtccctcatactaacccccgtttctct
cccccttcaggagcggttgtgtcgcaggagctggctcagccgtccttcgaccggcagcag
gccatgcgcgtcgtctcggagctggaggccaactgggacgtcctggtgatccactacatc
ggcctggtgtccctggtggtcctgggcgccctcatggtggtcgtcatgcccttcagcggc
ctcgtgttcgcctgctgccgctgcgccggccgctgcggagcccaggagcctcactacgat
aagaagcgcgacccgtgcaagcgcgtcaccctcggcaccttcctcgccaccctcgtcgtc
gtcatcttgctggggctggtctgcactttcgtgaccaacgcaaggatcgaggacggcgtg
cagaagctaccccgcgagttacgcaccgccctccacgacaccaagctcttcctcaacaac
accgacagcgaggtgcaaaatctgctggtgagcaactacagagagctgcaagatgtgctc
ttcaacaagctggatagcagtggtgaactggtgaagagtgagctggcacgggtgaccaaa
gctgtggcaatagacaatctgactgctatagtgaccagtctatcagcaatcaagaaagac
ctttggaccatcaaaaataccacactccaactgcaggaccaaacttccaatctacagagt
ggacttggtgatgttgctcgcaggttgcgtgagctccaggagtcttgtgaggcattgcca
gactgccaggagctcattacgcaatatgctgatcagctcagaatcaacaatgaatttgac
cagtacctggagacggatgttttgcctcagctgcctaatgttgaatcaaaattggatgaa
gtgaaatcactcatagaaaatgacatagaaatagcggtgaagcgaggaaagagagccttt
gactccattgcaaccgagatccaaaataaggtgcagcgttccatcccagagatcaaggcc
aagatcctcgatgcaggaggtgagctggaagatgcagcagagagcatccatagaacgtta
cagcgtgttgacacaaaacccaaagaaacggaaacatacataagattgttgcaggatggg
atcaatgagtatgctatgtataggtattggggcttcatggggctctgtatattactgttg
gtgatcaccctctgcttcacactgggtgtggtatttggctgctgtggccggcgacctgat
gaagcctcgtcttgccataaagcaactggggcatcgtggcttatgtgtggtgttggtctg
acgttcctgttctcagcactgatcatggcagcaaccacagcactctttgtgttgggcagc
ataagcgagatccttgtgtgtgaccccctagctgaccccacacactctgaagtctttaat
gctgctgcagaattatacaaccttaacaaccattatcctcctggtcaagctcccagcata
actgagattatcagcaaatgccacaacaaccagagcctgtattctgtcctgagtctgaat
cacgtagacagtaacctcgcccgactccaggattacaagaagaacttgaatcttgacgaa
aagatcgagcagctgatgcttcaaatcactgtggacaccgatgtagagatcctctctcga
aatgccaaggaacgtctgtgggaactcgccaactcctctgttgctgacaaggatacctgg
gattattacacagagattctggaaaagagggtgttgaagattgacctgatggacctagca
gccctgcttaaccagacagctgatcagcttcctactggctatgatcaagtttcattcaaa
ctcaaaaatgatgctcttttcttagagggtctgcaacgatgggtgtcctccattggccac
ctaacaaggaacctgaacaagacaacagccagactcaatgaacacctgaagttcaacaag
actagcctgcgcgaagccattggcgatctcatcagccaagcagaatttgctcagcagtac
cttcgcatcaatggttcacgagaagttaccgagcttgtcgaacgattttccaaggatttc
cttgctgatgtggatgaatatgttctgcatgtggaaacagcagtggagaatgacgttggg
cgatgtggcccagtctccacggtttacaatgcgacgacttcctctctgtgcaaggacatc
atgtatccctttaatggattctgggccagtgttggatgggtattcatattcttcattccg
gcaatgattcttgctgtgtatctttcatcattgtaccgcaagaccgaaccataccccgga
cctctcaatgagtccgaatacttgtatgatgcatatgatgagaggaacagctttcctatg
tccaaccaagagtccatgtatgacgcctatgctgagagggacaacattcccctcaccacc
agtgggtacgacaagaaacagcgccgtcgctcccgagaatatgagggccatgtgggcagc
agctatgccactgaccaggcgtatgggggctctcgcatgtcccccccgcggatagagtac
accaatcccactgactgggcagactaccctccaggcggcggccctccccgctactccagc
cagcccagcctctccccggaatacgaaagaccgcctccgtactattaccccgggccagga
gcaagaccgactgcactaacctaccgctcgaaccgactagacctggacagtgatgcatag
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