Penaeus vannamei (Pacific white shrimp): 113802348
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Entry
113802348 CDS
T06111
Name
(RefSeq) tetratricopeptide repeat protein 28 isoform X1
KO
K24936
tetratricopeptide repeat protein 28
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pvm03037
]
113802348
Cilium and associated proteins [BR:
pvm03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
113802348
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_8
TPR_2
TPR_10
TPR_MalT
TPR_16
TPR_14
TPR_4
Rapsyn_N
TPR_19
Paf67
Motif
Other DBs
NCBI-GeneID:
113802348
NCBI-ProteinID:
XP_069974906
LinkDB
All DBs
Position
43:complement(15731231..15853760)
Genome browser
AA seq
2494 aa
AA seq
DB search
MSVVNKAGLRSMDTQAYYRQGVALQCLGRHADALAAFSSGLAQDPKSLQLLAGLVEAAMK
SPLRATLEPTYRQLQTMRLDKSPFVIISVIGQELLAGGHYAAAVVVLESALKIGTCSLKL
RGSVFSALSSAYWALNSLDKAVSYMQQDLAVAKSLGDIAGECRAHGNLGSAYFSKGNYKE
ALTSHRYQLVLAMKCKDTQAAASALTSLGHVYTAIGDYPNALASHKQCVQLVKQMGDKLQ
EAREIGNVGAVYLAMGDFDSAVDCHMEHLRIAKHLNNKVEEARAYSNLGSSHHYKRNFDQ
AIAFHNHVLRIAQDLGDRTIEARAYAGLGHAARCMSDYGQAQRWHEKQLDMALSTKDKVA
EGRACSNLGIVYQLMGHHDAALKLHQAHLNIARLLQDRAGMGRAYGNIGNAYSAMGYYEQ
AIKYHKQELTISKEVNDRMSEASTHGNLAVAYQALGMHEMALLHYHSHLNIARELKDTAG
EACALLNLGNCHSSRGEFAQAVPYYEQYLMLSQELHDTEGEARACHFLGYAHYCLGNFKE
AIRYYDQDLALAKDLQDRKSMGRAYCNLGLAHLALGNSETALECQKYFLALAHMMKHLQG
KFRALGNIGDVLMKMKNYDEAVKVYQKQLVLAKQSRDKVLEASAYGALGLAHRLLKCFDK
ALGYHTQELTIRQEMGDIKGECKAHGHLGAVHMSLANYTNAMKCYQEQLERAKELKDAAM
EAQAFGNLGIARLNMGHFEDAIGYLEQQLATLEQLSTTTAVVDKGRAFGNLGDCYDALGD
SEEAIKCHEQYLAIALKTKSPRDQERAYRGLGSSHRCVGNLQQALVCYEKRLVVSHELNI
PAAKGSAYGELGHIHYLLGNFEQAISCMEHQHKIARELGDKQSEGEAACGLGTVYQQMCE
YSTALRYHQLDLKIAGELTNPAEQGRAHGNISLAYESLGNFEQAVTHGEQHLSIAAQMND
KVAKTLAYASLGRVHHALGNTTQAVAYLQQGLQIAEQLGRREDEAKIRHRLGMALWGHGD
LEAAQTQLDRAAHLLDTIRREARGSQDYRLSLFDLQTASYQALQRVLVGLGRNEDALLVA
ERGRTRAFVDLLLERQGASTSSRASRIEDSTPSSVDQIVDIVNRQKASVLYYSIAAGCLY
SWLIVPNKGIVKFHEVSVSEVEAEREGDCGEDAVGTSGSLLEHYIQSVRDALGVECGAGA
TRGGVSSETESEAGDMWNAHLEELGDKLNHEADRTGFLRMVNRNHLFNSSNYSLSSLFSL
GSVSGSIASGSASRPGSTRSRRVTWQGPSCLRSLYELLIAPMEDHLPETGVTRELMLVLE
GDLYLVPFPVLKGANSNDYLCERFSLLVVPSISALKVNQRSKNSKPSGEQTSALVIGNPK
LPSTVTEQWGWGDIPYAEQEASIVAEMLQTKALTSACANKEAIIRLISQVECIHLATHVS
WKLSAVILSPGEFVESRASKRLSHSSQPEAIHEHLDDESSDIASTIDLPALSEFLLTAAD
ILNLKLRAKLVVVSSCHTRDHHGRANSDGVVGFIRALLAAGAQCVLVSLWPVPDTAVKIL
FRTFYSSLLQGARVSRALSEAQQTVQTTKHFAHPANWAGFLLVGADVKLSNKVALMGQAL
CELLRTPDKCRDALRVTLHLVEKSLQRIHRGHRNAMYTTQKSIENKVGNVSGWKDLLMSV
GFRFEPAANGIPSSVFFPQSDPGERLTQCSASLQALLGLSQTSLQAVSKLLDSPEYAEDV
ISVMRAVITQFTVKDLENESIEVPVHVKLWRVNGCHELLASLGFDLMEVGRDEVTLRTGK
QANKRNIQFAHQALLALFADTQEAPKSLSVDSSSSLESLVSTDDEEESVAAPPPPPPPSQ
PLLPHRTAPLLLGRGAFSSYVRNRGEPDGARASTSEQKGRESDAAFTPSPVDPGAKYARA
FRSPHGPPSDTGSPQPSPRLSLTLAHQNKIRSMYTSNSPASDGGGKRPDSSSSTSSMTDW
ESGQATVRRQPIAKPVITSKAPISATHSRVSDVSAGFMRPHYVSINKSNSQASSGFESQS
SDSDFGPRRTGTVRSVYTTVGSASTLKLSKSATMDTLDRLSVRTEVGRPVVGGARGRRDR
STERELSGDSAEGQAAGASAAVVSTGAAESGETRSVQTRKMPEVQLDSSIGKLLRPRTNH
AATIHENDSLYNYRSGDEMSMKMGHMGHKSIQDHIIATQMSRLNREMPISDVYHERNLGL
GLAPPLSKLLMSAAQPIVAPDHADAETKSASEDSFGNFDKLSLADDNQLALPPKPDFKPK
PPPIPPKRFGPKPWVSAHPQVANMGVSLETSSGLPQASVAELSRRDEGDGRSMTDSHYSG
YSPSRGAGASKPAELSGPMAPPAQGRGYYELKNSAGVSGAEREQDTLGAGPQRPDEALLH
TVADLHTYAAFNPAYEHDEPLAMGSVGARIGSSEIAEYMEQLLGTTEPSENDQSDEASEA
KAKTCKRPGKHPVAWSKAKGHKQFSHHTQQSSSC
NT seq
7485 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtagttaacaaggctgggctacgcagcatggacactcaggcgtactaccggcag
ggcgtggcgctccagtgcctgggccgccatgccgacgccctggccgccttcagcagcggc
ctcgcgcaggatcccaagtcactccagctcctggcggggcttgtggaggccgccatgaag
agtcccctcagagccaccctggagcccacctaccgccagctgcagacgatgcggctggac
aagagccccttcgtcatcatctccgtcatcgggcaggagctcctcgccgggggccactac
gccgccgccgtggtcgtcctcgagtcggccctcaagatcggcacctgctcgctcaagctc
aggggctccgtgttctcggcgctctcctcggcgtattgggcgctcaactcgctcgacaag
gcggtctcctacatgcagcaggacctcgcggtggccaagtcgctcggggacatcgccggc
gagtgtcgggcgcacgggaacctcggcagcgcctacttcagcaaggggaactacaaggag
gccctcacttcccaccggtaccagctcgtcctcgccatgaagtgcaaggacacccaggcg
gcggcatcggcgctgaccagcctaggccacgtctacaccgccatcggcgactacccgaac
gcgctggcgtcgcacaagcagtgcgtgcagctggtcaagcagatgggcgacaagctgcag
gaggcgcgcgagatcggcaacgtgggcgccgtgtacctggccatgggcgacttcgacagc
gccgtcgactgccacatggagcacctgcgcatcgccaagcacctcaacaacaaggtggag
gaggcgcgcgcctacagcaacctgggctccagccaccactacaagcgcaacttcgaccag
gccatcgccttccacaaccacgtgctgcggatcgcgcaggacctgggcgacaggaccatc
gaggcgcgcgcgtacgccggcctgggccacgcggcgcgctgcatgagcgactacgggcag
gcgcagcgctggcacgagaagcagctggacatggcgctcagcaccaaggacaaggtggcg
gagggccgcgcctgctccaacctgggcatcgtgtaccagctgatggggcaccacgacgcg
gcgctcaagctgcaccaggcgcacctgaacatcgcgcggctgctgcaggaccgcgcgggc
atgggccgggcctacggcaacatcggcaacgcgtactcggccatgggctactacgagcag
gccatcaagtaccacaagcaggagctgaccatcagcaaggaggtcaacgaccgcatgagc
gaggcctcgacgcacggcaacctggccgtggcctaccaggcgctgggcatgcacgagatg
gcgctgctgcactaccactcgcacctcaacatcgcgcgcgagctcaaggacaccgccggc
gaggcctgcgcgctcctcaacctcggcaactgccactcgtcgcgcggggagttcgcgcag
gccgtgccctactacgagcagtacctcatgctgtcgcaggagctgcacgacaccgagggc
gaggcgcgggcgtgccacttcctcggctacgcccactactgcctcggcaacttcaaggaa
gccatcagatactacgaccaggacctggcgctggcgaaggacctgcaggaccggaagtcc
atggggagagcctactgcaacctcgggctggcacacctcgccctcggcaactcggagacc
gccctcgagtgccagaaatacttcctggccctggcgcacatgatgaaacacctgcagggg
aagttccgcgccctggggaacatcggcgacgtgctcatgaagatgaagaactacgatgag
gccgtcaaggtgtaccagaagcagctggtcctcgccaagcagtcacgtgacaaggtcctc
gaggcgtcggcctacggagcgctcggcctcgcgcaccgcctcctcaagtgcttcgacaag
gcgctcggataccacacgcaggagctgacgatcagacaggagatgggcgacatcaaggga
gagtgcaaagcccacggtcacctgggcgccgtgcacatgtccctcgccaactacaccaac
gccatgaagtgctaccaggaacagctggagagggcgaaggagctgaaggacgccgccatg
gaagcccaggcgttcggcaacctgggcatcgcgagactcaacatgggccacttcgaggac
gccatcgggtacctggagcagcagctggccacgctcgagcagctgtccaccacgaccgct
gtggtggacaagggccgcgccttcgggaacctcggcgactgctacgacgccctcggggat
tcggaggaggccatcaagtgccatgagcagtacctcgccatcgccctcaagaccaaaagc
ccgagggaccaggagagagcctaccgcggcctcgggagctcccacaggtgcgtcgggaac
ctccagcaggcgctcgtgtgctacgagaagcgcctcgtcgtgtcccacgagctcaacatc
cctgctgccaagggctctgcttacggcgagctcggccacatccactacctgctggggaac
ttcgagcaggccatctcgtgcatggagcatcagcacaagatcgccagagaactcggcgac
aagcagagcgagggcgaggcggcgtgcgggctgggcaccgtgtaccagcagatgtgcgag
tacagcacggccctccgctaccaccagctggacctcaagatcgccggggagctgacgaac
ccagcggagcaagggcgggcgcacggcaacatcagcctggcctacgagtcgctgggaaat
tttgagcaggcggtgacccacggcgagcagcacctcagcatcgcagcgcagatgaacgat
aaggtggccaagacgttagcctacgcctccctaggccgcgtgcaccacgccctgggcaac
accacccaggccgtggcgtatctgcagcagggcctccagatcgccgagcagctgggccgc
cgcgaggacgaggccaagatccggcaccgcctgggcatggccctgtgggggcacggcgac
ctggaggcggctcagacgcagctcgaccgcgccgcccacctgctcgacaccatccggcgg
gaggcgcgcggctcgcaggactaccgcctgtctctgttcgacctgcagacggcgtcgtac
caggcgctgcagcgggtgctggtgggcctcggccgcaatgaggacgccctgctggtggcg
gagcgggggcgcacgcgcgccttcgtcgacctcctactagaacggcagggcgcctcgacc
tcgtccagggcgtcgcgcatcgaggattcgacgccgtcgtccgtcgaccagatcgtggac
atcgtcaaccggcagaaggcgtcggtgctgtactacagcatcgccgcgggctgcctctac
agctggctcatcgtgcccaataaaggaatcgtgaagttccacgaggtgagcgtgagcgag
gtggaggcggagcgcgagggcgactgcggcgaggacgccgtcggcacgtcgggctcgctg
ctggagcactacatccagtcggtgcgcgacgccctcggcgtggaatgcggcgccggcgcc
acgcgcggcggcgtgtccagcgagacggagagcgaggccggcgacatgtggaacgcgcac
ctggaggagctcggcgacaagctcaaccacgaggccgaccgcacgggcttcctgcgcatg
gtcaaccgcaaccacctgttcaactcgtccaactactcgctgtcgtcgctgttctcgctc
ggctccgtcagcgggtcaatcgcctcgggctcggcctccagaccgggctcgacgcgctcc
aggagggtcacctggcagggcccgtcgtgcctccgctcgctctacgagctgctgatcgcg
cccatggaggaccacctgcccgagaccggcgtcacgagggagctcatgctggtgctggag
ggcgacctgtacctggtgccgttcccggtgctcaagggcgccaactccaacgactacctg
tgcgagcggttctcgctgctggtggtgccgtccatcagcgcgctcaaggtgaaccagcgc
tccaagaactccaagccgagcggcgagcagacgtcggcgctggtcatcggcaacccgaag
ctgccgagcaccgtgacggagcagtggggctggggcgacatcccctacgccgagcaggag
gcctccatcgtcgccgagatgctgcagacgaaggcgctgacgagcgcgtgcgccaacaag
gaggccatcatccggctcatctcgcaggtggagtgcatccacctggcgacgcacgtgtcg
tggaagctctcggccgtgatcctgtcgccgggcgagttcgtggagtcgcgcgcgtccaag
cggctgtcgcactcgtcgcagcccgaggccatccacgagcacctggacgacgagagctcc
gacatcgcctccaccatcgacctgccggcgctctccgagttcctcctgacggcggccgac
atcctcaacctcaagctgagggccaagctggtcgtggtgtcgtcgtgccacacccgcgac
caccacgggcgcgccaacagcgacggggtggtgggcttcatccgggcgctgctggccgcc
ggcgcccagtgcgtgctggtgtccctctggcccgtgcccgacaccgccgtcaagatcctc
ttcagaacattctactcctctctgctgcagggggcgcgagtgagccgggcgctgtcggag
gcgcagcagacggtccagaccacaaaacacttcgcccacccggccaactgggcgggcttc
ctcctcgtgggcgcggacgtcaagctctcgaataaggtcgcgctaatgggccaggcgctg
tgcgaactcctgcgaacgccagacaagtgccgagatgcccttagagtcacgttgcatttg
gtcgagaagtccctccagcgcatccaccggggccaccgcaacgccatgtacacgacgcag
aagtccatcgagaacaaggtcggcaacgtgagcggctggaaggacctcctcatgagcgtg
ggcttccggttcgagcccgcggccaacgggatccccagcagcgtgttcttcccccagagc
gaccccggggagcggctgacccagtgctcggccagtcttcaggcgctgttgggtctctcc
cagacatccttacaagccgtctcgaagctcctagactccccggaatatgctgaggacgtc
atctccgtcatgcgagctgtcatcacccagttcactgtcaaggacctggagaacgagtcc
atcgaggtcccggtgcatgtcaagctgtggcgtgtcaacggctgtcacgaactcctggcg
tcattaggctttgaccttatggaggtcgggcgggacgaggtcacgctgcggacgggcaag
caggccaacaagcgcaacatccagttcgctcaccaggcgctgctggcgctcttcgcagac
acccaggaggccccaaagagcctgagcgtggactcgagcagcagcctcgagtccctggtc
agcaccgacgacgaggaggagtccgtggccgcgcccccgccgccgcccccgccctcgcag
ccgctcctgccgcaccgcacggcgccgctgctgctgggccgaggcgccttctccagctac
gtcaggaaccgcggcgagcccgacggcgcccgcgcctccactagcgagcagaagggacgc
gagagcgacgccgccttcacgccctcgcccgtggacccgggcgccaagtacgcccgcgcc
ttccgctcgccgcacggcccgcccagcgacacgggctcgccgcagccgtcgccgcggctg
tcgctgacgctggcgcaccagaacaagatccgctccatgtacacgtccaactcgccggcc
agcgacggcggcggcaagcggcccgacagctcgtccagcaccagcagcatgacggactgg
gagagcggccaggccacggtgcggcgccagcccatcgccaagcccgtgatcacctccaag
gcgcccatctccgccacgcacagccgcgtcagcgacgtcagcgccggcttcatgcgcccg
cactacgtgtccatcaacaagagcaactcgcaggcgtcgtcgggcttcgagtcgcagagc
tccgactccgacttcgggccgcgccgcacgggcaccgtcaggagcgtgtacaccacggtg
ggcagcgcgtccacgctcaagctcagcaagagcgccaccatggacacgctggaccgcctg
agcgtgcgcacggaggtggggcggcccgtggtgggcggcgcccgcggccgccgcgaccgc
agcaccgagcgagagctgtccggcgacagcgcggagggccaggccgcgggcgccagcgcc
gccgtcgtcagcaccggagccgcagagagcggcgagacgcggtcggtgcagacacggaag
atgccggaggtgcagctggactcgtccatcgggaagctgctgcggccgcgcacgaaccac
gcggcgaccatccacgagaacgactcgctgtacaactaccgctcgggcgacgagatgtcc
atgaagatgggccacatgggccacaagagcatccaggaccacatcatcgccacgcagatg
tcgcgcctcaaccgcgagatgcccatcagcgacgtgtaccacgagcgcaacctgggcctg
ggcctggcgccgccgctctccaagctgctcatgtcggcggcgcagcccatcgtggcgccc
gaccacgccgacgcggagaccaagtcggcctccgaggacagcttcggcaacttcgacaag
ctgtccctggccgacgacaaccagctggcgctgccgcccaagcccgacttcaagcccaag
ccgccgcccatcccgcccaagcgcttcgggcccaagccctgggtgtcggcgcacccgcag
gtggccaacatgggcgtgagcctggagacgtcgagcggcctcccgcaggcgagcgtggcg
gagctgagtcgccgcgacgagggcgacggccgctccatgacggactcgcactactcgggc
tactcgccctcgcgcggcgccggcgccagcaagcccgccgagctgagcggccccatggcg
ccgcccgcgcagggcaggggctactacgagctcaagaacagcgcgggcgtgagcggcgcc
gagagggagcaggacacgctgggcgcgggcccgcagcgccccgacgaggcgctcctgcac
acggtggccgacctgcacacgtacgcggccttcaaccccgcctacgagcacgacgagccc
ctggccatggggtcggtgggcgcgcgcatcggctcgtcggagatcgccgagtacatggag
cagctgctgggcacgacggagccgtcggagaacgaccagtcggacgaggcgtcggaggcc
aaggccaagacgtgcaagcggcccggcaagcaccccgtggcctggagcaaggccaagggc
cacaagcagttctcgcaccacacgcagcagtcgtcgtcgtgctag
DBGET
integrated database retrieval system
