Penaeus vannamei (Pacific white shrimp): 113802382
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Entry
113802382 CDS
T06111
Name
(RefSeq) uncharacterized protein isoform X3
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvm03041
]
113802382
03009 Ribosome biogenesis [BR:
pvm03009
]
113802382
Enzymes [BR:
pvm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113802382
Spliceosome [BR:
pvm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
113802382
Ribosome biogenesis [BR:
pvm03009
]
Eukaryotic type
90S particles
Helicases
113802382
Pre-60S particles
113802382
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
113802382
NCBI-ProteinID:
XP_027208755
LinkDB
All DBs
Position
22:complement(20545474..20562758)
Genome browser
AA seq
699 aa
AA seq
DB search
MACKLYRSRVYLVEVCPFPGVPKAQRASRVIGYLPTTVKQQLPQDKAERVAPHHLITKKR
SAENGDNQQPKKTVKQQLPQDKTERVAPPQPQDKTERVARPQPQNKTERVARPQPQDKTE
RVAQPQPVDKKCPAENGDGQKPKKRKPRKKKLGGDITEAKQNIDVKKKETEKTKAGETKS
NPGERRSNTGETKTVVTGEKGELVKKRKKIFKKKKKPKENQSTVEKIDNQSTVELIDNSN
FDFGNSERSFKNLEGSISPKTLRVLQQLGFKEMTEIQAKAIPKLLQGLDLRGTAKTGSGK
TLAFTIPVIELMSKLNFMPSQGTGVVILSPTRELSIQTRDVLAPFAKAHSLTMELIIGGT
NMKTEAAKLRQGVNIIVATPGRFLDHLRSTKDFIFKNMACLVLDEADRILDTGFEHDLKK
ILQHLPSERQTILFSATKDTKTNALAPLALKANPVEVDVDSDKNEATVDGLEQAYVVCPI
EKRVSLLCRLIKENQDKKVMIFLNSVWNVKYYHHILNCLEVPVSLLHGRLSQNKRTDGFF
TFKNQTKGTLLCTDVGARGWDIKGIDLIIQFDPPSDPMEYIHRVGRTARAGDSGSAILFL
QPHETNFISYMKSHSVTLPHMDISWREVEELQVEELNQHDEHLSNMGKKAYRAFLRSYMA
LPLKSIFDPSKLDTLRVARAYGFNKEPLKVRLFRKEKRK
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggcatgcaagctctatcgctccagggtatatttggtggaggtttgtcctttccccgga
gtgccaaaagcacagagggcatcgcgagtaattgggtatcttccaacaactgttaagcag
cagttgccacaggataaggctgaaagagttgctccgcatcatctgatcacaaaaaaacgt
tctgcagaaaatggagacaaccagcaaccaaagaagactgttaagcagcagttgccacag
gataagactgaaagagttgctccgcctcagccacaggataagactgaaagagttgctcgg
cctcagccacagaataagactgaaagagttgctcggcctcagccacaggataagactgaa
agagttgctcagcctcagcctgttgacaaaaaatgtcctgctgaaaatggagatggccag
aaaccaaagaaaaggaaaccaagaaagaagaaacttggaggagacattacagaagcaaaa
caaaatatagatgttaagaagaaagagactgaaaaaactaaagcaggagagacaaaaagt
aatccaggagaaagaagaagtaatacaggagaaacaaaaactgtggtaacaggagaaaaa
ggagaattagtaaaaaagcggaagaagatttttaagaagaaaaagaagcctaaagaaaac
caaagcacagttgagaagatagataaccaaagcacagttgagctgatagataacagtaac
tttgattttggaaactcggaaagatcgttcaagaaccttgagggaagtatatcacccaaa
acactaagagtcctgcagcaattaggcttcaaggagatgacagagattcaagcaaaggca
atccctaagcttcttcaaggactagacctgcgagggacagccaagactggatctggaaag
accttggcctttaccatcccagtgatcgagttgatgagcaaactgaacttcatgcccagt
caaggtactggagttgtcatcctctctccaactcgtgagttgtctatacagacacgtgat
gttttggcgcccttcgctaaggcacactcattgacgatggagttgattataggtggtacc
aatatgaaaactgaagctgcaaaattacggcaaggtgtgaatattatagttgctacacca
ggaaggttccttgatcacctcagatcgactaaagacttcatcttcaaaaacatggcttgt
cttgttcttgacgaggcagatcgtattcttgatacaggatttgagcatgatctcaaaaaa
atcttacaacatctaccaagcgaacgtcagacgattttgttcagcgcaacaaaagatacc
aagacaaatgctttagcccctcttgctcttaaggccaatcctgtagaagttgatgtagac
tcagacaaaaatgaagcaacagtggatggcttagaacaggcttatgtggtgtgtcctatt
gagaagagggtttcccttctctgtagacttattaaagagaatcaggacaaaaaagtcatg
attttccttaacagcgtctggaatgtcaagtattaccaccacatccttaactgcttggaa
gttcctgtttccctactccatgggaggctgtcgcaaaataaacgaactgatggattcttc
actttcaaaaatcaaacaaaaggtacacttttgtgcacagatgtgggtgcgagaggctgg
gacattaaaggcatcgacttgataatccagtttgatcctccctccgaccccatggagtac
attcaccgggttggaagaacggccagagctggagacagtggcagtgctatactgtttctt
caaccacatgaaactaatttcatttcttatatgaagtctcacagtgttactcttcctcac
atggatatttcatggagagaagtagaagaacttcaggtggaggagttaaaccagcacgat
gaacacctctccaatatgggaaagaaggcttaccgtgcttttctacgatcatacatggct
cttcctctgaagtctatctttgaccctagtaaacttgatacattaagggtcgctagagca
tatggcttcaataaagaaccactgaaagtgcgtttatttagaaaggaaaagcgcaaatga
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