Penaeus vannamei (Pacific white shrimp): 113802523
Help
Entry
113802523 CDS
T06111
Symbol
pea
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113802523 (pea)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvm03041
]
113802523 (pea)
Enzymes [BR:
pvm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
113802523 (pea)
Spliceosome [BR:
pvm03041
]
Complex C
Other components
Step II factors
113802523 (pea)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
GIPC1_GH2
DEAD
AAA_22
AAA_19
PWI
nSTAND3
TsaE
ABC_tran
Motif
Other DBs
NCBI-GeneID:
113802523
NCBI-ProteinID:
XP_027208931
LinkDB
All DBs
Position
41:complement(26353538..26364219)
Genome browser
AA seq
1303 aa
AA seq
DB search
MEDVFRLERLSLVSKICVELENHLGINDKDVAEFIIALAEKSKRLDKFKKELEENGGDQF
ADSFVESLWRLIQHMMPSLTAGPVPEKIKEEPGKPKTEKDWKREMLPFLALPNDPKVLNM
LDDELKPKVKEEPQTEHRLKNGNNKEKEKKKKKKKDKDREREKEDKQDRKVKPDPSLEVD
DLMAFLESHAPSKQNTKARSKSRSRSRNRSRSRSRSRSRSREKKRRSRERERERRRSRSR
SRDRERDRDRDRDRDRDRDRDRDRDRERDRRRSRSQERYRGRRERSRSRDRHRDRKERDR
RERSRSRGRDRHPRRSRSRSRDRDREQERGRGSNREAFVNRPPDENPVVGKVYEGKVTNI
LNFGCFVQLEGLRRRLEGLVHISQLRREGRVTNVSDVVVKGQKVKVKVLSFTGQKTSLSM
KDVDQDTGEDLNPNVAPMGGNSQDEDAMRNPDRPMSLMELTKGTDEEDLATYKRVNRISS
PERWELKQMMAANCISKSEFPDFDEEQGVMGGEDDDEEDVEIELVEEEPAFLRGYGRVRE
ELSPVRIMKNPDGSLAQAAMMQSALAKERREVKMAQRESEMDSQPSNLGQNWNDPLPETQ
RIDPAMSRGMPTQQQEVPEWKRHITGGTRGSYGKKTNMSLLEQRQSLPIYKLRDQLIKAV
HDNQILIVVGETGSGKTTQITQYLAEVGFTAKGKIGCTQPRRVAAMSVAKRVSEEFGCRL
GQEVGYTIRFEDCTSSETVIKYMTDGMLLRECLIDPDMSTYACIMLDEAHERTIHTDVLF
GLLKQAVAKRPELKLIVTSATLDAVKFSEYFNQAPIFTIPGRTFPVEILYTREPETDYLD
AALITVMQIHLAEPPGDILVFLTGQEEIDTACELLYERMKALGSDVPELIILPVYSALPS
EMQTRIFEPAPPGSRKVVIATNIAETSLTIDGVYYVVDPGFVKQKVYNPKTGMDSLMVTP
VSQAGAKQRAGRAGRTGPGKTYRLYTERAYRDEMLPTSVPDIQRTNLAATVLQLKAMGIN
DLLGFDFMDPPPTDAMVMALETLHSLSALDDEGLLTRLGRRMAEFPLDPNLSKMLIMSVH
LQCSDEILTIVSMLSVQNVFYRPKEKQALADQKKAKFNQAEGDHLTLLAVYNSWKNNKFS
NAWCYENFVQMRTLKRAQDVRKQLLGIMDRHKLDVVSCGKNVARAQKAICSGFFRNAAKK
DPQEGYRTLVDSQVVYIHPSSSLFNRQPEWVVYHELVQTTKEYMREVTTIDPKWLVEFAP
SFFKQGDPTKLSKYKKNQRLEPLYNKYEEPNAWRISRVRRRRN
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atggaagatgttttcagactcgaaagactgtctttggtctccaagatatgcgtggagttg
gagaatcacttgggaattaatgataaagatgttgctgaattcatcattgccctggcagag
aagagcaaacgccttgacaagttcaaaaaggagcttgaggaaaatggaggggatcaattt
gctgattcatttgttgaaagtttgtggaggttgattcagcacatgatgccgtccctcacg
gctggccctgtgccggaaaagataaaggaagagccaggaaagccaaagacagagaaggac
tggaaacgtgaaatgctgcccttcttggccttgcctaacgatcccaaagtactcaacatg
ttggatgatgagctaaagcctaaggtgaaggaggagccccagacagaacaccgtctcaag
aatggcaacaacaaggagaaagagaagaagaaaaagaagaagaaggacaaagaccgtgaa
cgagagaaggaagacaagcaagacaggaaggtgaagcctgacccatcactggaggtggat
gacctgatggcctttctggagtcgcatgctccctctaagcagaataccaaggccagaagc
aaaagcagaagccgtagcaggaacaggagtaggagcagaagtaggagtagaagcagaagc
agggaaaagaagaggagatcaagggaaagagagagggagaggaggaggagcagaagccgc
agcagggatagagaaagggacagggacagggatagggacagggacagggacagggacagg
gacagggacagggacagggaaagagacaggaggaggtcaaggagccaagaaagatacaga
gggaggagggagcggagtcgcagccgagacaggcacagggatagaaaggaaagggacagg
agagagaggagcagaagcagggggagagacaggcacccgagaagaagcaggagccggagc
agagatagagacagagaacaggagagaggaagaggaagcaaccgtgaggcctttgtcaac
aggccgcctgatgagaaccctgttgttgggaaggtttacgaaggtaaagtgaccaacatc
ctcaactttgggtgctttgtgcagctggaaggactgcgtaggaggttggaaggtctggtt
cacatctctcagctgcgcagagaaggacgtgtgacaaatgtgtcggatgtggtagtgaag
gggcagaaagtgaaggtgaaggtcctgtctttcacgggccagaagacatcgctgtctatg
aaggatgttgatcaggacacaggtgaagacctcaaccctaatgttgcacccatgggagga
aacagccaggatgaggatgccatgaggaaccccgacagacctatgtcactcatggagctg
actaaaggcacagatgaggaagatttggctacatacaagcgtgtgaatcgcatctcatca
ccggagcggtgggagctcaagcagatgatggcagccaactgcatcagcaaatctgaattc
ccagattttgatgaggagcagggagtgatgggcggagaagatgacgatgaagaggatgtg
gagattgagttggtggaagaggagccagccttcctgcgtgggtatgggagggtgcgagag
gagcttagtccagtgaggatcatgaagaaccctgatgggtctcttgcacaagctgccatg
atgcagagcgccctggctaaggagcgacgtgaggtgaagatggcccagagggagagcgag
atggactcacagccttccaaccttggtcagaactggaacgacccgctgcctgaaacccag
cggatagacccagccatgtcacgtggcatgcccacacagcagcaggaggttccagagtgg
aagagacacatcacaggtggtacacgaggatcatatggtaaaaagacaaacatgtccctt
ctggaacagcgacagagcctccccatctacaagctccgcgaccagctgatcaaggctgtc
catgataatcagattctcattgttgttggggaaacaggatcagggaagacgactcagatt
actcagtatttggcagaagtgggtttcacagccaagggtaagattggatgcacgcaaccc
aggagagtggcagcaatgtccgtggccaagagggtgtcagaggagtttggttgtcgcctt
ggccaggaggttggctacaccattcgatttgaggattgtactagctcagaaactgttatc
aagtacatgacggatggtatgttactgagagagtgcctcatcgacccagacatgtccaca
tatgcatgcattatgttggatgaggctcacgagagaacaatacacactgacgtgctgttt
ggtctcctgaagcaggctgttgccaagagacctgagctaaagctgattgtgacatcagcc
accctagatgcagtgaagttctccgagtacttcaaccaggctccaatcttcacgattcct
ggccgcaccttccctgttgagattctgtacacccgtgagcctgaaacagactacctggat
gcagcactgatcactgtgatgcagatccacctggcagagcccccaggggacatcctggtg
ttccttacaggtcaagaggagattgacacagcgtgtgagttgctgtatgagcgtatgaaa
gccctaggtagtgatgtacctgaactgattatcctccctgtgtactcagcccttccctct
gagatgcagacaaggatctttgagcctgccccacctggctccaggaaagttgtgattgcc
accaacattgcagagacctcactcaccattgatggtgtctactatgttgttgatccagga
tttgtgaagcaaaaagtatacaaccccaagacaggaatggactccctgatggtaacacct
gtctctcaagctggagccaagcagcgggcaggacgtgcaggtcgcacaggccctgggaag
acctacagactctacactgagagagcatacagagatgagatgttgccaacaagtgtgcca
gacattcagcgcacaaatttagcagccactgtgcttcagcttaaagctatggggattaac
gacctcttgggcttcgatttcatggacccgccccccacagatgctatggtcatggcccta
gaaaccttgcactcactaagtgcccttgatgatgagggtctgctgacgaggttgggccgg
aggatggccgagttcccccttgaccccaacctctccaagatgcttatcatgtcggttcac
ctgcagtgttctgatgaaatcctgaccatcgtctccatgctgtctgttcagaatgtgttc
tataggcccaaagagaagcaggcactggcagaccagaagaaggccaagttcaaccaggca
gagggcgaccacctcaccctcctcgctgtctacaactcgtggaagaacaacaagttttcg
aatgcctggtgctatgagaattttgtccagatgcgcacgctcaagagggcacaggacgtg
aggaagcagctcttgggcatcatggacaggcacaagctggatgtggtctcttgtggcaag
aatgtggcaagagcccagaaggccatctgctctgggttcttccgtaatgctgctaagaag
gaccctcaggagggctaccgaaccctagtcgactcgcaggtggtctacattcacccctca
tcatccctcttcaacagacagcctgagtgggttgtctatcacgaactggtccagacgaca
aaagagtacatgcgtgaggtaacaacgatcgaccccaagtggctggtagagttcgcccca
tcattcttcaagcagggagacccgaccaagctcagcaagtacaagaagaaccagcgcctg
gaacctctctacaacaaatacgaggagccgaatgcatggagaatatccagagtccggaga
agaagaaactaa
DBGET
integrated database retrieval system
