Penaeus vannamei (Pacific white shrimp): 113802624
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Entry
113802624 CDS
T06111
Symbol
Tsc1
Name
(RefSeq) hamartin
KO
K07206
tuberous sclerosis 1
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm04140
Autophagy - animal
pvm04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
113802624 (Tsc1)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
113802624 (Tsc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hamartin
PKcGMP_CC
Motif
Other DBs
NCBI-GeneID:
113802624
NCBI-ProteinID:
XP_069976363
LinkDB
All DBs
Position
Unknown
AA seq
1165 aa
AA seq
DB search
MEEVKDQNVGDVLALLESPQEDVVQEVRLLLKETLTTVREGWLMTGLLDYFFTSNSGRLL
DILLGVSEPHDRHLLDRLAEGLKGPDRFRYTCLLLYAARRQPTTTWLRKFVNHGAMRELL
NCLHNEDDVPVTVSGIMVLVMLLPALPLEMGHSHLTNILDIFCRLLRWSPKREQDEGFQP
FLQVAVYSLFHRLYALYPCHFLTYLRNNFSKPNSSNCFFTTLKPMMEKVRLHPLLITETK
DSELTRNRWIGLETHQLILECAKLCLDPIEATCEESCGSFFTMNGGSDIPLDPQPVPTNW
MLSAVENNFWSPSLAQSSPAPLQTPRGSVPQTPVYPILTPNQRGKVAESPPEAAIEATPE
TTPFTSPIKMEPNTLVTRRPLSGRRALTLNTGGAPEPVGQPADSEANSSPMSPLKKDQAP
FRFPENQGQDFFLRAERSTLLQTKLQQIQRERQINQIENLFSQYTENKSETDSKNEGDVV
DGRDTKEGNSLVPRKAVGDRQSIENDVESKPSDFRVSQVDLRYRKRKASVYDGIHHVDLT
QLQQATGHLANGNNDLDFSSEAAQYSETEDGEKNYRLPPIIDRRISEEKESEGSESRKSS
DEPQNCDKNCDEPESIGLGVPSQRSMTDLVKNIKTMRLRFLSQCGPPPDLSQYNMVSSMR
VALSPTKSVTTPVKTLQRSSSCPNLTTEGPPLLGNVTDGRVRKESAMSSLTLSPTRQPVM
MCEASTQTEESNVINPYEQLLDVLVSGPGVPQSKTSRGNSGDTDQDSPSPHQLLDQYLQH
SSKAINKAKNLLWQQNSGTDEGLKNQVRLMQTMLLLERYKREVHAERNRRLLGKAKKVYA
LEEEKRSLKEEVRHLESEVARLKHDLSNAQVNALNKEQQLQLALNQQQAKVNQVFVECEQ
AQKERELLLQQCNSLRKEKETLSTQLHGAQAALIERDRQLTVQAALAEDNRALSHQVETL
HKQITLMGELQEQYKQQVWQLSLSGGLGASKGLTLERMAAHQQVEKLEVSQRIAAASLEA
ALARVAELENSLKDKEREVEEQQRTVKAAKEAGVEQCRVAERRCQALAATNQTLESYILE
HNDRIDRLSRQVRRSQRGKSVCSDGFDIDLELSASPSSASCSSTATSPPDDMTGALLGRQ
PVVLNRLDALLELDMEPEGNQRRKT
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggtgaaggaccaaaacgttggagatgttctggcactgttggagagccctcag
gaggatgtggtgcaagaagtgaggctgctactgaaggagactcttacgactgtgcgggaa
ggatggcttatgacaggcctgcttgactatttctttacatccaatagtggccgacttctt
gacatcttgctgggagtgagtgagccccatgaccgtcatcttttagatcgacttgcagag
ggactcaaaggacctgatcgcttcaggtacacttgtctcttgctgtatgctgctcgacga
cagccaacaacaacttggttgcgaaagtttgtcaaccatggggctatgcgagaacttctg
aactgtttgcataatgaagatgatgttccagtaacagtcagtggcatcatggtcctggtt
atgctacttccagcactgcccctggaaatgggccactcacatctcactaatatactggac
atcttctgtcggttattgcggtggagccccaagcgtgagcaagatgagggcttccagcca
tttttacaggttgctgtatattccctttttcatcggctttatgccttatacccatgtcac
ttcctcacatatctgcgtaacaatttttcaaaaccaaattcctcaaattgcttttttaca
accctaaagccaatgatggagaaggttcgacttcatcctcttctcataacagaaacaaaa
gattctgaactaacaaggaataggtggattgggttagaaactcaccaactgatccttgag
tgtgctaagctttgccttgatcctattgaagctacatgtgaggaatcatgtgggtcattt
tttacaatgaatggtggaagtgacataccacttgaccctcagccggtcccaacaaactgg
atgttaagtgctgtggaaaacaatttttggtctcctagtttggcccaatcctcaccagcc
cctcttcagaccccacgtggctcagttccccagacccctgtgtatccaatccttacccca
aaccagcgtggcaaagtagctgaatcacctccagaagcagccattgaggcaacaccagag
acaactccatttacatcacccattaaaatggagccaaacaccctagtgacacgcagacca
ctgtcagggaggagggctttgacgctgaatacaggtggagcacctgaacctgttggtcaa
ccagctgattctgaagctaactccagccctatgtcccctttgaagaaagatcaagctcct
ttcaggttcccagaaaaccaaggtcaagattttttcttgcgagcagaaaggtcaactctc
ctgcaaaccaaactgcagcaaattcagagggaaagacaaatcaaccaaatagagaatctc
tttagtcaatacactgaaaataagagtgaaactgacagcaagaatgaaggggatgtggta
gatggaagagatacaaaggaaggtaattctttggtgccaaggaaagctgtaggggatagg
cagagtatagaaaatgatgtagaatcaaaaccgagtgattttagagtatctcaagtggat
cttagatacagaaaacgtaaagcatcggtgtatgatgggatccatcatgttgatttgaca
cagctgcaacaagcaacggggcatttggcgaatgggaacaatgacttggatttttctagt
gaagcagctcagtacagtgaaacagaagatggagagaaaaattataggttgcctcccata
atagatcgtagaatatctgaagaaaaggaatctgagggtagtgagagcagaaaatcgtct
gatgaaccccagaattgtgataaaaactgtgatgaaccagagagtatagggttaggagtt
ccgagccaaagatcaatgacagatttagtgaaaaatataaaaactatgcggctaaggttt
ctaagtcaatgtgggcctccacctgatctatcccagtacaatatggtgagttcaatgcgt
gtggcattatcacccacaaaatctgtaactacacctgtgaaaacattacagaggagctca
tcctgtccaaatttaactactgaaggcccaccattattgggaaatgttactgatggaaga
gtgcggaaggaatcagccatgtcttctctcaccttgtcaccaacaagacagccagtcatg
atgtgtgaagcaagcacacagactgaggaatccaatgtaattaatccatatgagcagctt
cttgatgtccttgtaagtgggccaggagtaccacaatcaaaaacatcaagaggaaattct
ggagacacagaccaagattcaccttcaccacatcagctattagaccaatatttacaacat
agtagtaaggcaattaacaaagccaaaaatctactgtggcagcaaaatagtgggacagat
gaaggactgaagaatcaggtccggctgatgcaaaccatgttattattggaacgatataaa
agagaagtacatgctgaaagaaatagaagactgttgggaaaagccaagaaggtctatgct
cttgaagaagagaagcgtagcttaaaggaagaagtgagacatcttgagagtgaagttgct
agattgaagcatgatctaagcaatgcacaggttaatgctttaaacaaggaacagcaacta
cagttagccttaaatcagcaacaggcaaaagttaaccaagtttttgttgaatgtgagcaa
gcccagaaggaacgagaactcttactgcaacagtgcaattccctcagaaaagaaaaggaa
actttatcaacacagttacatggagctcaagcagcattgattgaaagagatagacagcta
acagttcaggctgcattggcagaagataacagagcacttagtcatcaagttgagaccctt
cacaaacagataactcttatgggtgaactgcaggaacaatataagcaacaggtgtggcaa
ctctcactttcaggtgggttgggtgcaagtaaaggtttgactttagaacgcatggcagct
catcagcaggtggaaaagttggaagtctctcaacgtattgctgcggccagtttagaagct
gcacttgcacgtgtagcagagctagagaattctctaaaagataaggaaagagaagttgaa
gagcaacagcgtacagtaaaagcagcaaaagaggctggtgtggagcagtgtagggttgct
gaaagacgatgccaagcacttgctgccaccaaccaaaccttggaaagttatatcttggaa
cacaatgatcgtattgatagactaagtcggcaggtgcgaagatctcaaagaggaaaatca
gtttgtagtgatggttttgacattgatctagaattatcagcttcaccatcatctgccagt
tgtagtagcactgccacatcaccccctgatgacatgacaggtgccctccttggaaggcag
cctgttgtgctcaaccgtctagatgctttattggaattagacatggaaccagaaggaaat
caaagaagaaagacctag
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