Penaeus vannamei (Pacific white shrimp): 113802827 Help Entry 113802827         CDS       T06111                                  Name (RefSeq) helicase POLQ-like isoform X2   KO K19178   POLQ-like helicase [EC:5.6.2.4] Organism pvm  Penaeus vannamei (Pacific white shrimp) Brite KEGG Orthology (KO) [BR:pvm00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:pvm03400]     113802827 Enzymes [BR:pvm01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      113802827 DNA repair and recombination proteins [BR:pvm03400]  Eukaryotic type   Other factors with a suspected DNA repair function    Helicases     113802827 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  POLQ_helical DEAD Helicase_C HTH_61 ResIII HHH_5 DNA_pol_lambd_f CCDC23 Motif Other DBs NCBI-GeneID:  113802827 NCBI-ProteinID:  XP_027209267 LinkDB All DBs Position 2:complement(51216090..51242527) Genome browser AA seq 1274 aa AA seqDB search MPNMTSETQEKIMSSPVLRSQRLSRKAVFRNALTGKNDACVSKSPQNVGQKSHCGPLSSP VLRSQRKMRCWVGGAANENTPTRKRPREHDERQTTKKIDTPKSTTPRSRKYAEIDSPSTA FMNHDDSFLESVNFDELDSLELTPIEKPKILNNNRIPLSNSGLHSSPYLLRKTPRRINLQ NTSEFIQPPRICTNPNTVTKARKQVFSDFCKEKVIVDNCIKTSVPKEVSMYEGTVIPESS CSTNSSHQHLMSSVNCSAQADNNITKANSKKTSGRSSPDIFGEEQLDSQFDDTFGLTDTQ MSCLDEAYFDGSSDPSRNTQDFIKPDAKVVVKSTSSHEAANIKNNTSQEISPTTSNGQAT HNKSGDSFGSPDSQLSFISTQGSQALLDRFQNRLKDAVTSNQTDAPIKTATERRAEVVAA VMEAVEMTSNDDFELGPFFGLPSKVLDVLRAHRGISKLYDWQEECIIKGSGSENLIFSLP TSGGKTLVAEVLMLRQLLLKKQNALLILPYVALVQEKVRGLAPFGVELEFLIEEYAGSRG SFPPKAKRKKSVLYIATIEKASGLVNALLETDRMQELGLVVVDEVHMLAEPGGRGAMLES IITKLRYAARKVQLVAMSATVGNLNELASFLGAQLYTGNFRPVELAEYVKITNQIWEINT AARVEEDLLKNKRLSCFPYSQEQKKIDVDMVGGLVGEVVPEHSCLVFCPTKRNCETLAEL ICRILPKELTKIRVTDKRALYRALSEEGSGVVCPVLRRIIPYGVAYHHSGLTEGERRLIE EGYLAGTLCCLCCTSTLAAGVNLPARRVIIRSPYTGSAFLTRARYKQMVGRAGRAGLDTC GESFLILQPKDTKEAGLLLLSPIEVCTSTLANQDWHGLTGLVFTSLGLGVAVTLPQLKAL TRRSLLALQANRLNIDVEPQVVKIVEDLRAQGLVRIKVDVVEQKSSGGTAPKSSGNKASQ SEQSQNSTICSSSFSSPPSLENDMAQIINRPISENDILTVSRLGRAAVKGNVELKLAGQL YKDLCLARENLAVNSHLHLLFLVTPYDAAENIKIVPDVYYSAYSKLATDEVKVAKVLGIT EAVMVRINMGQNVKKVKESVLKRFYLALLLFQLWSGMGIWEASEMFRIHRGFTQQALSSA SAFASCVFHFCQELEELWAFRDLLANFTRQLSGCCTAELLPLLDLPSVKKGRARLLYNAG YHTLKDIANASAIDLTRCVDHLPLRTAAQIVSSAKMLLLEQAEALQGEAEEVLSGLREHA SGTDMPAKTKAQSE NT seq 3825 nt NT seq  +upstreamnt  +downstreamnt atgcccaacatgactagtgaaactcaggagaagatcatgtcatccccagtccttagaagt caaagactatcaaggaaagcagtttttcgaaatgcactgacaggtaagaatgacgcctgt gtttcgaaaagcccccaaaatgtagggcaaaaatcacattgtggtcccttgtcatcacct gtccttaggagccaaagaaaaatgaggtgttgggttggtggggcagccaatgagaacaca cccaccaggaagaggccaagagaacatgatgaaaggcaaactaccaagaagatagatact ccaaaaagcacaactccaaggtcaagaaagtatgcagaaattgacagcccttcaactgca ttcatgaatcatgatgactccttcctagaaagtgtcaattttgatgagctggactcatta gaattaactccaattgaaaagccaaagattttaaataacaacagaattcctttgtctaac agtggtttacattcaagcccatatctgctacgcaaaaccccacgaagaattaaccttcag aacacaagtgaattcattcagccaccaagaatatgcaccaatcctaacacagtcactaaa gctagaaaacaagtgtttagtgacttttgtaaagagaaggtaattgttgataactgtatt aaaacaagtgttccaaaagaagtatcaatgtatgagggaactgttattccagaaagcagc tgtagtacaaatagtagccatcaacatcttatgtccagtgttaattgcagtgcccaggca gacaataatatcacaaaagctaattccaagaagacatctgggagaagttcgcctgatatt tttggggaagaacagttggattctcagtttgatgatacatttggtctcacagacacccaa atgtcatgtctggatgaagcatactttgatgggagcagtgacccatcacgcaatacccaa gatttcattaaacctgatgcaaaagttgtagtgaaatccacttctagtcatgaagcagct aatattaagaataatacatcccaagagatttctcccacaacctcaaatggacaagcaaca cacaataaatcaggagattcatttggttctccagactcacagcttagtttcattagcaca cagggatctcaggcacttctggatcgttttcagaacaggttaaaggatgcagtgacttcg aatcagactgatgcacccatcaagactgctactgagcgtcgggcagaagttgttgctgca gtgatggaagctgtagaaatgacctcaaatgatgactttgaacttggtccattctttgga ctcccctccaaggtgctagatgtgctcagggctcatcgtggcatttcaaagctctatgat tggcaggaagagtgtattattaaaggctcaggctcagaaaacctcatcttttctctccca acaagcggtgggaagaccctggtggcggaagtgctgatgctgcggcagttgctcctcaag aaacaaaatgcacttctaattcttccctatgtggctcttgtccaagaaaaagtacgtggc ctggcaccttttggagtggagctagagtttcttattgaagaatatgctggaagccgtgga tcattccctcccaaggctaagcggaaaaagagtgtgttatatatagctacaatagagaag gcttctggacttgtgaatgcactcctagaaaccgatcgcatgcaggagttgggacttgtg gtagtggatgaggtccacatgctggctgagcctgggggtcgtggtgccatgttggaatcc atcataaccaagttgcgctatgctgctcggaaggtccagctggttgcgatgagtgccaca gttggtaacctgaatgagttggcaagctttttaggagcacagttatacacaggaaacttt aggcctgttgagctggcagagtatgtgaagattaccaaccagatttgggaaataaacact gctgctcgtgttgaagaagatttgttaaagaataagcgtctgagttgttttccttactct caggagcagaagaaaattgacgttgatatggtgggtggtttggtgggtgaagtagtgcct gaacattcgtgccttgtcttctgtcctacgaagcgtaactgtgagactttagcagagctc atatgtcgaattctgcccaaggaattgactaaaattcgagtgactgataaacgcgctctc taccgtgccctgtctgaagaggggtctggggttgtgtgccctgttttgagaagaatcatc ccatatggtgttgcatatcatcactctgggttgactgaaggagagagacgccttattgaa gagggttaccttgctggaactctgtgttgcctttgttgcacttccactcttgctgctggt gtcaaccttccagctagaagagtaattatccggtcaccttacactgggagtgcctttctc acacgtgcaaggtacaaacagatggtaggacgggcaggacgtgcaggccttgacacatgt ggggagagcttcctcattctccagccaaaagacacaaaagaagctggactacttttgctg tctccaattgaagtctgtacatccacactggcaaatcaagattggcatggcctaacaggg ctggtgtttacttcgttgggcttgggagtagctgtaacacttccgcagttgaaagctctg acccgacgttcacttctcgcccttcaagctaataggctgaatatagatgtggagccacag gtggttaagattgtggaggacctaagagctcaaggtcttgttcgtattaaagttgatgtc gtagaacaaaagtcatctggaggaactgcacctaaaagttcaggaaacaaagctagccag agtgagcagtcccagaattctacaatatgtagttcttccttttcaagccctccatctctt gaaaatgatatggctcagattataaaccgtcccatcagtgaaaatgacatacttactgtt agcagacttggcagggcagctgtcaaagggaatgttgaactgaagctagctggacaactt tacaaggatctttgccttgcacgtgagaatcttgctgtcaacagccaccttcatctttta ttcttagtgaccccttatgatgcagcagagaacattaagattgtaccggatgtttactac agtgcgtatagtaaacttgctacagatgaggttaaagttgccaaagttttgggcatcaca gaggctgtaatggtcaggatcaacatgggtcagaatgtaaagaaagtgaaggaatcagtt ttaaagcgcttttatttggccctcctgctcttccaactgtggtctggtatgggtatatgg gaggccagtgaaatgttccgaatacacaggggcttcacacagcaagcactgtcgtctgca tcagcatttgcatcctgtgtcttccatttttgtcaggaattggaagagttgtgggcattc agagatcttttagccaactttactcgtcagttgtcgggttgctgcacagctgaattgctt cctctgttagacctgccttctgtgaaaaagggcagggcacgtctgctttacaatgctggc tatcacacactgaaagacattgcaaatgctagtgcaatagatttgactcggtgtgttgac cacctgccattacgcactgctgcacagattgttagttcagcaaagatgttactgctagag caggcagaagcgctgcaaggtgaagcggaagaggtcctttcaggtcttcgagaacatgca tcagggacagatatgccggccaaaactaaagcccaatctgagtga

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