Penaeus vannamei (Pacific white shrimp): 113802998 Help Entry 113802998         CDS       T06111                                  Symbol Sf3b3 Name (RefSeq) splicing factor 3B subunit 3   KO K12830   splicing factor 3B subunit 3 Organism pvm  Penaeus vannamei (Pacific white shrimp) Pathway pvm03040   Spliceosome Brite KEGG Orthology (KO) [BR:pvm00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     113802998 (Sf3b3)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:pvm03021]     113802998 (Sf3b3)    03041 Spliceosome [BR:pvm03041]     113802998 (Sf3b3)    03036 Chromosome and associated proteins [BR:pvm03036]     113802998 (Sf3b3) Transcription machinery [BR:pvm03021]  Eukaryotic type   RNA polymerase II system    Coactivators     SAGA/TFTC/STAGA complex      113802998 (Sf3b3) Spliceosome [BR:pvm03041]  Complex A   U2 snRNP components    U2 snRNP specific factors     113802998 (Sf3b3)  Complex B     113802998 (Sf3b3)  Complex C    U2 SnRNP specific factors     113802998 (Sf3b3) Chromosome and associated proteins [BR:pvm03036]  Eukaryotic type   Histone modification proteins    HAT complexes     STAGA complex      113802998 (Sf3b3)     TFTC complex      113802998 (Sf3b3) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Beta-prop_RSE1_1st Beta-prop_RSE1_2nd CPSF_A WDR55 Beta-prop_BBS7 Motif Other DBs NCBI-GeneID:  113802998 NCBI-ProteinID:  XP_027209503 LinkDB All DBs Position 25:22179804..22194126 Genome browser AA seq 1217 aa AA seqDB search MYLYNLTLQRASGITHAVHGNFSGTRTQELVVSRGRSLELLRPDPNTGKVHTILTTDIFG VIRSLMAFRLTGGNKDYVVVGSDSGRITILEYSQAKNQFERIHMETFGKSGCRRIVPGQY LAIDPKGRAVMIGAVEKQKLVYILNRDAAARLTISSPLEAHKSNTLVYHMVGVDVGFENP LFACLEIDYEEADTDPTGEAVHRTQQTLTFYELDLGLNHVVRKYHEPLEEHANFLISVPG GNDGPSGVLVCSENYLTYKNLGDQPDIRCPIPRRRNDLDDPERGMIFICAATHKTRSMFF FLAQTEQGDIFKITLETDEDVVTEIKLKYFDTVPPATAMCVLKTGFLFVASEFGNHYLYQ IAHLGDDDDEPEFSSAMPLEEGDTFFYAPRQLQNLVLVDELDSLSPIMACQIADLANEDT PQLYTVCGRGPRSSLRVLRHGLEVSEMAVSELPGNPTAVWTVRKRTEDLYDSYIIVSFVN ATLVLSIGETVEEVTDSGFLGTTPTLACSQLGDDALVQIYPDGIRHIRADRRVNEWKAPG KKTIVRCAVNQRQVVIALTGGEIVYFEMDPTGQLNEYTERKEMKSDVICMGLGRVPAGEQ RSRFLAVGLSDNTVRIISLDPNDCLTVRGMQALPALPESLSIIEMGGQEGSESESRTLGA LYLNIGLQNGVLLRTVLDSVTGDMSDTRTRYLGSRPVKLFRIIMQGSEAVLAMSSRSWLS YYYQNRFHLTPLSYESLEYAAGFSSEQCPEGIVAISTNTLRILALEKLGAVFNQVSHPLE YTPRKFVIHQESGHLVVIETDHNAYTEDTKRQRKLQMAEELKEAAGEEEAEVAERMAEAL LSEDLPDAVFGAPKAGPGMWASLIRIIEPIQGNTLFTMRLDQNEAAFSIALVKFANQSDM DQQFLLVGTVKDYQLSPRQVDCGYIYTYRIVGDCTSLELVHRTEVEDIPTALCPYNGRVL VGVGRLLRIYDLGKKKLLRKCENKHVPNLIVDIKARGQRVFVSDVQESLFVLRYKRHENQ LIIFVDDTNQRWVTTSCLLDYDTAAVADKFGNIAVIRLGGDTNDDVDEDPTGNKALWDRG LLNGASQKTEVIANFHVGETVNTLEKATLIPGGSESLVYTTLSGTVGVLVPFTSREDHEL FQNLEMHMRSEHPPLCGRDHLSFRSYFFPVKNVIDGDLCEQFNMVDPGKQRSISEDLDKT PNELSKRLEDIRTRYAF NT seq 3654 nt NT seq  +upstreamnt  +downstreamnt atgtatttgtacaacctgactctacagcgtgcatcaggcatcacccatgccgtgcatggg aatttttctggaacacgcacacaggaattagtggtttctcgtggaagatcattggaactt ttgagacctgatccaaatactgggaaggtacacaccattttaacaacagacatatttggt gttattcgttcactgatggcattcagattgactggtggaaataaagattatgttgtggtg ggatctgactctggcagaatcaccattctagaatatagtcaggctaaaaaccagtttgag cgcatccacatggagacatttggtaaaagtggttgcagacgcattgttcctggccagtat cttgccattgatccaaagggcagggcagtaatgattggtgctgttgaaaagcagaagtta gtgtacattctcaaccgtgatgcagcagcaagactgacaatctcctctccattggaagca cacaagagcaacacacttgtatatcacatggtaggagtggatgttggttttgaaaatcca ctctttgcctgtctggagattgattatgaggaagcagacactgaccctacaggagaggct gtacacaggactcagcaaactctaacattttatgaactggatctgggactcaaccatgtg gttcggaagtaccatgagccccttgaagaacatgcaaacttcctcatatcagtgccaggt ggaaatgacggaccttctggtgttttagtttgttcagaaaactacttaacctataagaat ctgggagatcaacctgacatcagatgtcctattcctaggagaagaaatgatcttgatgat ccagagcgaggaatgatcttcatttgcgcagccactcacaagaccaggtcaatgttcttc ttcctggctcagacggagcaaggagacatcttcaagataacattggaaacagatgaagat gttgtgacagagatcaagttgaagtattttgacacagtgccacccgcaacagcaatgtgt gtcctcaagactgggtttctctttgttgcctcagaatttggaaatcactacttgtaccag attgctcatttgggtgatgatgatgatgaaccagagttcagttcagctatgccacttgaa gaaggagatacatttttctatgcaccacgacagttgcaaaaccttgtgctcgttgatgaa cttgactcactttctcctattatggcatgccaaattgctgatttagcaaatgaagataca ccacagttgtatactgtttgtggtaggggcccaaggtcatctcttcgtgtacttcgtcat ggtcttgaagtgagtgagatggctgtgtcagagttgcccggtaaccccacagctgtatgg actgtcaggaagcgaactgaagatctttatgattcgtacatcattgtatctttcgtaaat gccacacttgtgctgagcattggagagactgtagaggaagtgacagattctggtttcctt ggtacgactcctacattggcctgttcccagcttggagatgatgcgcttgtacagatttat ccagatggcatccgtcacatcagagctgaccgtcgtgtgaatgagtggaaagcccctgga aagaagactattgtgcgatgtgctgtcaaccagagacaagtagtgattgctctcactggg ggagaaattgtttactttgagatggatccaacagggcagctgaatgaatacacagagagg aaggagatgaaaagtgatgtcatctgcatgggccttgggcgagtgcctgctggggagcaa cgatccaggttcttagctgtggggctgtcagacaatactgtcagaattatatccttggat cccaatgattgcctaacagtgcgaggcatgcaagctttgccagctctaccagaatctctc agtatcatcgagatgggcggacaagaagggtcagagagtgaatctcgcactttgggtgca ctgtatctgaacattggtttacagaatggtgtgctcttaagaactgtgttagattctgtc actggtgatatgtctgatacacggacacgatacttgggttccagacccgtcaagcttttc aggattattatgcaaggaagtgaagctgttcttgctatgtcttctcgttcctggctgtct tactattatcagaacagatttcatttgacaccactgtcatatgaaagtctagagtatgct gcagggttctcctcagagcagtgccctgaaggtattgtagcaatttccaccaacacgctg cgtattttggctctggaaaaactgggagctgtctttaatcaggtatcccatccacttgag tatacgccacgcaaatttgtcatccatcaagagagtggtcatttggtggttattgagact gatcataatgcctacacagaggataccaaaagacagagaaagcttcagatggcagaggaa ttgaaagaagcagcaggagaagaagaagcagaagtggctgaacgcatggcagaagcactt ctttcagaagacttgccagatgcagtatttggtgcaccaaaagctgggccagggatgtgg gcatctctcattcgtattatagaacctattcaaggaaacaccctttttacaatgagattg gatcaaaatgaagcagctttcagtattgccctggtaaagtttgcaaatcagagtgatatg gaccagcagttcttgttggttggaacagtgaaggactaccagttaagcccacgtcaagtt gactgtggatatatatacacttacagaattgttggtgattgtaccagtctagagctagtt catcgaacagaagttgaagacattccaacagctttatgcccatacaatggcagagtatta gtaggagttggaaggttgcttagaatatatgacttagggaagaaaaaactgcttagaaag tgtgaaaataagcatgttccaaacctgattgtggatatcaaagcacgtggacagcgagtt tttgttagtgatgttcaggaaagcttgtttgtgcttagatataaaagacatgaaaatcag ctcatcatatttgtggatgacacaaaccagcgatgggtgacaacatcttgcctccttgat tatgatacagcagctgtagcagacaagtttggcaacattgcagtgataaggttaggtgga gataccaatgatgatgttgatgaagatcccacaggaaacaaggcactctgggaccgtggt cttctgaatggtgcctcacaaaaaacggaagttattgccaacttccatgtaggagaaact gttaatacacttgagaaagcaactttaatccctggaggcagtgagtctcttgtatatact accttgagtggcactgttggagttctggtaccatttacatcaagagaagaccatgagcta ttccaaaacttggagatgcacatgcggtcagagcatccaccactctgtggacgagaccac ctctccttcaggtcttactttttccctgtaaagaatgtcattgatggagacttgtgtgag cagtttaacatggtagatccaggtaaacagcgcagtatttctgaagacttggataaaact cctaatgaactttcaaagagattagaagacattagaactcgctatgcattctaa

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