Penaeus vannamei (Pacific white shrimp): 113803247
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Entry
113803247 CDS
T06111
Name
(RefSeq) cartilage oligomeric matrix protein-like
KO
K04659
thrombospondin 2/3/4/5
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm04145
Phagosome
pvm04512
ECM-receptor interaction
pvm04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113803247
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
113803247
09142 Cell motility
04820 Cytoskeleton in muscle cells
113803247
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvm04131
]
113803247
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvm04147
]
113803247
00536 Glycosaminoglycan binding proteins [BR:
pvm00536
]
113803247
Membrane trafficking [BR:
pvm04131
]
Endocytosis
Phagocytosis
Opsonins
113803247
Exosome [BR:
pvm04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
113803247
Exosomal proteins of colorectal cancer cells
113803247
Exosomal proteins of bladder cancer cells
113803247
Glycosaminoglycan binding proteins [BR:
pvm00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113803247
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_3
EGF_3
Motif
Other DBs
NCBI-GeneID:
113803247
NCBI-ProteinID:
XP_069997675
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All DBs
Position
28:21468671..21472196
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AA seq
412 aa
AA seq
DB search
MTSEDIASNESDCHVKASCEPVHGSNYTCTCSEHYFGNGFDCKDACELNTCFPGVACNVT
FNETLFICGPCPYGYSGNGSYCIKLECPTGFAGDGVTCGPDSDLDGFPNVDLPCVDPQCR
RDNCPVVPNADQGDVDGDGFGDVCDDDADGDGLADSAENCPLVCNPGQSDTDADGFGDDC
DNCPNDANPTQSDADGDGAGDVCDADADDDGVTNDVDNCIEVANSDQLDLDGDGVGDACD
NCPQDANADQVDSNANLFGDACDDGVDTDLDSILDTLDNCPAIPNSDQGDADADGVGDVC
DDDADNDGILNVNDNCPLVANAYQGDVNEDGVGDVCSQDYDGDGHVDATDTCPNSGALWH
ESLGTLQVVQLYFDYTPEWTFSKDGLQSYETKISDPTMALGINGNSIHTSLP
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcggaagacatagcatcgaacgagagtgactgccatgtcaaagccagctgtgaa
cctgttcatggaagcaactacacctgcacgtgtagtgaacactattttggcaatggattc
gactgcaaagatgcctgtgagctgaatacctgtttccctggagttgcatgcaatgttacc
ttcaacgagactttgttcatttgcggtccttgcccctacgggtacagtgggaatggtagc
tattgcataaaattagagtgtccgacaggctttgcaggtgatggtgtgacctgcggccct
gacagcgacctggacggcttccccaacgtagatctgccttgcgtcgatcctcaatgtcgt
cgggacaactgcccggtggtgcccaacgcggaccagggagacgtggacggcgacggcttt
ggtgacgtttgcgacgatgacgccgacggtgacgggctagccgatagtgcggaaaactgc
ccgctagtgtgcaatcccggccaaagtgacaccgacgcagacggtttcggggacgactgc
gacaactgccccaacgacgccaacccgacccagtctgacgctgacggcgacggggctggt
gacgtctgtgatgccgacgcggatgacgatggcgtgacgaacgacgtcgacaactgcatc
gaagtggccaacagcgaccaactggacctcgacggcgatggtgtgggcgacgcttgcgac
aactgcccccaagacgccaacgctgaccaggtcgacagcaacgcaaaccttttcggggac
gcctgcgatgatggcgttgacacagatttagactctatcttggacaccctggacaactgc
cccgccatccctaacagcgaccagggtgacgccgacgcagacggagtcggtgacgtgtgc
gatgacgacgccgacaacgatggaatcctcaacgtcaacgacaactgcccgctcgtcgcc
aacgcctaccagggggatgttaacgaagacggcgtgggggacgtgtgttcgcaggattat
gacggggacggacacgtggacgccacagacacgtgcccgaatagtggcgctctttggcat
gagagcttggggacgttacaggtagttcagctgtattttgactacactccagagtggaca
ttctccaaggacggtttacaaagctacgaaacaaagatatccgatccgacgatggctctt
ggtatcaatggcaattccattcacacttcgctgccatag
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