Penaeus vannamei (Pacific white shrimp): 113803294
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Entry
113803294 CDS
T06111
Symbol
Cals
Name
(RefSeq) calsyntenin-1
KO
K22659
calsyntenin 1
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pvm04515
]
113803294 (Cals)
Cell adhesion molecules [BR:
pvm04515
]
Cadherins
Cadherin related
113803294 (Cals)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_2
Laminin_G_3
Glyco_hydro_16
FAM176
Motif
Other DBs
NCBI-GeneID:
113803294
NCBI-ProteinID:
XP_069971582
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All DBs
Position
37:complement(23665909..23697749)
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AA seq
948 aa
AA seq
DB search
MNKKGMWIVDFQGRGVPVFDLVQPSEGYHGLVSEKDTVVEVQPPIRATPNVCFYRIVNKH
HGEAPFIIRLRNEATGEAELIAKRPLNCEKRKNYKFDITAVSCDANVESQNVTVHVKVND
VNEYAPVFVEPSYLVGVDEGRLYDEILTLQADDQDCSPKYGDICRYELLTKDQPFSIDSE
GVVRNTEPLDYEKSHNHILSVVAYDCGMERSQPVMVTIKVNRVCHLGWKGITDQVEYSPG
SGRQELFPSASLELCNVPCRVERVQARISLTTSHIGKGCDRDTYSVAAQRKMCGASSSSI
ELLPAPGAGKDWTAGLHSDEGHEGDLIYEFDGDSSGTIIPEAILNHNLTSTFTISTWLKH
KTQAGTDKHTKEHILCNADDHKMNRHHMALFVRNCRLILLLRRDYTEANLNTFQPAEWRW
KLPQVCDNEWHHYSVHVKLPEVTLYVDGHIFRPENGESPEVIDDWPLHPTRGINTTMSVG
ACWQGSEGNMKHGLSGYLAGLSVLVGALESPRVLSCLTRCQESLDTPAMELLQPSMELLT
NNEMTQITIEGNNVTNLETLIRRVAYVNGRDFPTPGRRPVSVTTNILCNSEKALKVATAQ
SFVVVMQPHQPSIELNGTTNFAEEYEAFRQGLRVFPDVGIYLSAAAEEATAPTLGGQLDE
CVVSVYPPLNPDHETLVLPDNLIAELGLAASITRQGATVSGAHTTHHYQSILRQIHYANR
KPAYYLNRAFKLSCSELGGRFTSNEYVQTVTVIHPQLSVDKTAAFNTNTDSIPPHMEHNT
HNAHQEADAHLTHHNPQPVPAHAKLSAHHVELKPAHTVNDVYFTSNVMEGVAVNSASHAV
TIIIVVCVGFLVFMVVLGVIRVRAAHTRHTHEDVADAEMAWDDSSLNITVNPMEQQLELA
ETQRLRDDDDDDDDSSDDGSNFNDDLDSSDEEEGKPKELEWDDSTLKI
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaaggggatgtggattgtggatttccaaggaaggggagtgccggtgttcgac
ctcgtgcagccttcggagggctaccacggcctcgtctccgagaaggacaccgtggtggag
gtgcagccgcccatccgcgccacgcccaacgtctgcttctacaggatcgtcaacaagcac
cacggggaggcgcccttcattatccggctaagaaacgaagccaccggagaggccgagttg
atagccaagcgccccctcaactgcgagaagcggaagaattacaagttcgacatcaccgcc
gtttcctgcgacgccaatgtggagtcacagaacgtcaccgtccacgtgaaagtgaacgac
gtgaacgagtacgcgcccgtgttcgtggagccctcgtacctggtgggcgtcgacgagggg
cgcctctacgacgagatcctgacgctgcaggctgacgatcaggactgctcgcccaagtac
ggagacatctgccgctatgaactgctcaccaaggaccagcccttcagcatcgacagcgag
ggcgtggtgcggaacacggagcccctggactacgagaaatcccacaaccacatcctgtcc
gtggtggcctacgactgcgggatggagcgctcccagccggtcatggtcaccatcaaggtc
aaccgggtgtgtcacctgggatggaaaggcatcaccgaccaggtcgagtactccccgggc
tccggccgccaggagctgttcccttcggcgtccctggagctgtgcaacgtgccctgccgc
gtggagagggtgcaggcgaggatcagcctcaccaccagccacatcggcaagggctgcgac
agggacacgtattccgtggcggcgcagaggaagatgtgcggcgccagctcctccagcatc
gagctcctgcccgcccccggagcagggaaagactggaccgccggcctgcactccgacgaa
ggccacgaaggggacctgatctacgagttcgacggcgactcctccggcaccatcatcccc
gaggccatcctcaaccacaacctgacgtccaccttcaccatatccacctggctcaagcac
aagacgcaggcagggacggacaagcacaccaaggagcacattctctgcaacgccgacgac
cacaagatgaacaggcaccacatggcactctttgtgaggaactgccgtctgattctcctg
ctccgccgcgactacaccgaggccaacctcaacaccttccagccggcagagtggaggtgg
aagctcccccaggtgtgtgacaatgaatggcatcattactcggttcacgtgaagctgccc
gaagtaaccctgtacgttgacggtcacatcttcaggcccgagaatggggaatcccctgag
gtgattgatgactggccccttcacccaacacgcggcatcaacacaactatgagcgtgggc
gcatgttggcaaggctccgagggcaacatgaagcacggcctctcgggctacctggctggc
ctctcggttctggtgggggccctggagtctccgcgcgtcctgtcctgcctgacccgctgc
caggagtccctcgacactcctgccatggaactcctgcagcccagcatggagctcctcacc
aataatgaaatgacacagatcaccatcgaaggcaataatgtgactaaccttgagacgctg
atacgccgcgtggcctacgtcaacggccgggacttccccacccctggacgtcgaccagtc
tcggtgaccaccaacatcttgtgcaactctgaaaaggccctgaaggtcgccactgcccag
agcttcgtggtggtgatgcagccgcaccagcccagcatcgagctcaacggcaccaccaac
ttcgccgaggagtacgaggccttccgccagggcctgcgcgtgttccccgacgtgggcatc
tacctctcggccgccgcggaggaggccacggcccccacactgggcggccagctggacgag
tgcgtggtttcggtgtatcctcctctgaaccccgaccacgagacgctggtgctccccgac
aacctgatcgcagagctcggcctggccgcctccatcacgcgccagggagccaccgtgtcc
ggggcccacaccacgcaccactaccagtccatcctgcgccagatccactacgccaaccgc
aagccagcctactacctgaaccgggccttcaagctgtcctgctccgagctcggcggccgc
ttcacaagtaacgaatatgtccagacggtgacagtgatccacccgcaactcagcgtggac
aagaccgcagccttcaacaccaacaccgacagcattcctccccacatggaacacaacacc
cacaacgcccaccaggaggctgatgcccacctgacccaccacaaccctcagcccgtgcca
gctcatgccaagctctccgcccaccacgtcgagctcaaacccgcccacactgtgaatgac
gtctacttcacttcaaatgtcatggagggcgtagcagtgaacagcgccagtcatgcagtc
accatcatcatcgtcgtgtgcgttggattcctggtgttcatggtcgtgttgggcgtgatc
cgtgtgcgcgccgcccacacacgccacacccacgaggacgtcgccgatgcagagatggcc
tgggatgactcctctctcaacatcaccgtgaatcctatggagcaacagctggaactggca
gagacacaacgactgagggatgatgacgatgacgacgacgactcgtcagatgatgggagc
aacttcaacgacgacctggactcttcagatgaggaggaagggaagccgaaggagctggag
tgggacgactcgaccctcaaaatttaa
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