Penaeus vannamei (Pacific white shrimp): 113803327
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Entry
113803327 CDS
T06111
Symbol
Vps52
Name
(RefSeq) vacuolar protein sorting-associated protein 52 homolog isoform X1
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvm04131
]
113803327 (Vps52)
Membrane trafficking [BR:
pvm04131
]
Protein recycling
Others
EARP complex
113803327 (Vps52)
Endosome - Golgi transport
Tethering complex
GARP complex
113803327 (Vps52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
U5_2-snRNA_bdg
Dor1
Motif
Other DBs
NCBI-GeneID:
113803327
NCBI-ProteinID:
XP_027209891
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Position
9:14705083..14716347
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AA seq
699 aa
AA seq
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MTTLLKGQGQPGQDANSTLRVGITMVGAGGTDDVDSSIRAQLEDEVIQEALTSGTDLRQY
SQSVEKDLRQLENLSIQDYIDKAQNIAALHHQITECDSILENMQGMLEGFLTHLSTISQE
IQSLQEQSASINVQLTNRKQVHSEVSAFIDQLMVPEVMIHHILNTPVTDEHFMEQLKALN
QKSKFIKEQNFRDAHSCQDVQDIVDKLTVKAVSKIREYLLQKVYQFRKPLSNYQIPQNAM
IKHKFFFEFLLLHARTIAAEIHDEYVETMSKVYSSYFQSYTKQLWKLQYEEGVTRDDLMG
VEDSRANSFFTKSLKSRGTVFTLGTRDSVLSPTGLTQDIIVPHTASKGEAKYPFEVLFRS
QQYVLMDNGCREYIFLTEFFMVRDSDAQKLFLTVMGKTLQHVQKEVCGVVMGCYDSIALY
LCVHLIHQYRLLCHKRAVPALDNHWEQLLHMIWPRFEYVVKTNIQSIQECDPSKMPSLDM
RPHYITRRYAEFSGAVMVLHEKFPLEGVDTLMLQLQDEVEKVILKMAAVFHHRKDQLIFL
INNYDMMLSVLSEKTREDSRECERLKELLGQRTGEYIEEVLAPHFGGMLTFVRETDHLIA
NNNIDALKDYEKKVVPLVRSFSSTWRKSVERLNNEVMQCFTNFRTGTVVLQRALETLITA
HHTFNRILAHQAFQHLNIKGDIVNSHHLIVEAKKYKPTF
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgaccacactcctcaaaggtcaaggacagccaggacaggatgcaaactccactctcaga
gtaggcatcacaatggttggtgcaggaggaaccgacgatgttgactcaagcataagggca
cagctggaagatgaggtgatacaggaagctctcacatcaggcacagacctaaggcagtac
tctcagtctgttgaaaaggacctcagacagctggagaacttaagtatccaagattatatt
gacaaagcacaaaatatagctgcgctccatcatcagataacagaatgtgactctatactg
gaaaatatgcagggaatgctagaaggttttctgacccatttgtcaacaattagtcaagaa
atccagtctttgcaagaacaatcagcttccattaatgtccagcttacaaacaggaagcag
gttcattctgaagtatctgcattcattgatcagttgatggtccctgaggtgatgatacat
cacatcttgaacactcctgtgactgatgagcactttatggaacaactgaaggcactgaat
cagaagagcaaatttattaaggaacaaaactttagagatgctcattcatgtcaagatgta
caagatattgttgataaactaacagtcaaagcagtaagcaagattcgagagtatttgctg
cagaaggtgtaccagtttcgcaaacctttgtctaactaccagatacctcagaatgctatg
atcaaacacaagttcttctttgagtttcttctcctgcatgcaagaacaatagctgcagaa
attcatgatgagtatgttgaaacaatgagtaaagtgtatagctcatacttccagtcatat
acaaagcagctatggaagttgcagtatgaggaaggagtgactcgtgatgaccttatgggt
gtggaggattcacgtgcaaacagtttttttacaaagagtttaaagagtcgtggtacagtt
ttcactctgggaactagagactcggtactttctccaacagggcttacacaggacattatt
gtgccacacaccgctagcaagggtgaagcaaagtatccttttgaagtactcttcagaagt
cagcaatatgtcttaatggataatgggtgccgggaatacattttcctcacagagttcttc
atggtgcgagatagtgatgctcaaaaacttttcttaactgtcatgggcaagacactacaa
catgtccagaaagaagtatgtggagtagtaatgggctgctatgactcaatagcgttatat
ctgtgtgtccatttgatacatcagtaccgccttctgtgtcataagcgagctgtgccagca
ttggataatcactgggaacagttacttcacatgatatggccaaggtttgaatatgttgtg
aagacaaatatccaaagtatccaggaatgtgatccctccaaaatgccatcactagatatg
aggccacattatataacccgaagatatgcagagtttagtggagctgttatggtattacat
gagaagtttcctctggaaggtgttgataccctcatgctacagcttcaggatgaagtagaa
aaggtcattctgaagatggcagcagtgtttcatcatcgtaaagaccagctgattttcctg
attaataattatgatatgatgctatcagtgttgtctgaaaagacccgagaggacagtcgt
gagtgtgagcgcctgaaggagctgttgggtcagcgtacaggagagtacatagaggaagtc
cttgctccacattttgggggcatgttgacttttgtaagggagacagatcaccttattgcc
aacaataacattgatgccttaaaagactatgaaaaaaaagtagtgccacttgtcaggtcc
ttttcatctacatggcgaaaatcagtggaacgactgaataatgaagtcatgcagtgtttc
acaaatttccgtactgggactgttgtgctgcagcgagcactggagactcttattactgct
catcatactttcaatagaatccttgcacatcaagcattccagcacttgaatattaaaggt
gacattgtaaattctcaccacttgattgtagaagcaaagaaatataagcctacattttag
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