Penaeus vannamei (Pacific white shrimp): 113803403
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Entry
113803403 CDS
T06111
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03018
RNA degradation
pvm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113803403
09123 Folding, sorting and degradation
03018 RNA degradation
113803403
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvm03019
]
113803403
03041 Spliceosome [BR:
pvm03041
]
113803403
Messenger RNA biogenesis [BR:
pvm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113803403
mRNA degradation factors
5'-3' decay
Lsm complex
113803403
Spliceosome [BR:
pvm03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
113803403
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
RHH_1
Motif
Other DBs
NCBI-GeneID:
113803403
NCBI-ProteinID:
XP_027209982
LinkDB
All DBs
Position
10:complement(36138110..36143876)
Genome browser
AA seq
139 aa
AA seq
DB search
MLPLSLLKTAQNHPMLVELKNGETYNGNLVSCDNWMNINLKDVICTSRDGDKFWRMPECY
IRGSTIKYLRLPDEVIDLVKEEVIARGRGRGESRGRGGPGRGRGGPGRGGFGGRGRGGPP
GGGRGGPGRGGMKKKEGYK
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
atgttgccactctctttgttgaagacggctcagaatcatcccatgctggtagaattaaag
aatggtgaaacttataatggaaatttggtatcatgtgacaactggatgaatataaacctt
aaagatgtcatctgcacatcaagggatggtgataagttctggagaatgccagagtgctat
atccgaggttcaactatcaaatacctgcgacttcctgatgaagtgattgatttggttaaa
gaagaggtgatagcaagaggacgtggtagaggtgaaagtagaggtcgtggtgggccagga
agaggtcgtggaggtcctggcagaggtggttttggaggccgtggacgtggtggcccacct
gggggaggacgtggaggcccaggacgtggaggcatgaagaagaaagaaggatataaataa
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