Penaeus vannamei (Pacific white shrimp): 113803496
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Entry
113803496 CDS
T06111
Symbol
Sema1a
Name
(RefSeq) semaphorin-1A isoform X1
KO
K06842
semaphorin 6
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
MGC-24
DUF3180
Motif
Other DBs
NCBI-GeneID:
113803496
NCBI-ProteinID:
XP_069987251
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Position
16:complement(9143605..9536977)
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AA seq
782 aa
AA seq
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MSAHMVLVWAGVTAMALVTHASWRNSVMPKRYVELGDQEVMRFVGNETHDEYLKLILPDT
SGSLLVGGRNVIYNLSLASLQENTRLEWHPSTAQMNSCYMKGGSEEVCQNYIRILTEKSQ
GHYLICGTNAYNPMCRDFKLGNSGLERDKEFPGRGICPFDPNHNSTAVFADGHLYVGTIA
DFAGLEPLIYRDPLRTEQYDLSTLNAPNFVSSFALGDFVYFFFREIAVEYLNCGKTLYSR
VARVCRHDKGGPHKFRNKWTSYLKSRLNCSVSGDFPFYFNEIQATTEPVEGRYGGHATTL
LYGVFTTPENSIPGSAVCAFTFQDIMDTFEGPFKGQASVNANWLPVHGTQVPEPRPGQCV
KDSSTLPDVTLNFIKSHSLMDEAVPAFFGQPILISTSFHYSGRFTSIAVDQQVKTPDNKY
YDVLFIGTDDGKVIKAINTKSADSYEDVEPFIIEDITVFPSNMAVTSLQIIKPKGKPPRL
LVSSRSRIHSIPLSRCQTNKITECSECVALQDPYCAWDKNKNKCHTYTSGKEMIQNVSEG
VHTDCGNTEKKVKPPAHSASINRESSGTLPPIHSQPDVGGMFEILDHDITRAQTVPQQFT
AETLAIAVASATIGALILGFITGFFCGKKCNKDEDNQLYADTDYEYFDQRQNPNPHLTGE
LQEEVTYAEPVLVPQTLNKPVNLMLNMSPKATLKTPGSNTPGANVGTLGAPMGPSLGLPT
TGVSAGPHDIPLHYTPESYSTHGTLRSSEKYGTRGRDHRPRDYDHRLVDGYSTTRSVKKV
YL
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctcatatggtgttggtgtgggcgggggtgactgccatggcgttggtcacccat
gcctcctggcgcaacagtgtcatgccaaagagatatgttgaattaggcgaccaagaggtc
atgcggttcgtgggcaacgagacgcacgacgaatacttgaagctcattctgcctgacacg
tcgggctctctcctcgtgggcggaaggaatgtaatatataacctaagcttagcgtcactg
caagagaacacgagattggaatggcacccctcgacggcccagatgaactcgtgctacatg
aagggcggctcggaggaggtgtgccagaactacatacgcatcctgacggagaagtcccag
ggccactacctcatctgcggcaccaacgcctacaaccccatgtgcagagacttcaagctc
gggaactcaggccttgagcgtgacaaagaattcccaggtcgtggcatctgtcccttcgac
ccaaatcacaacagcacggcggtgtttgcagatggtcacctgtatgtgggaaccatcgcc
gacttcgctgggctggagccgctgatatatcgcgatcctttgcgaaccgagcagtatgac
ctgtccacgctaaatgcccccaacttcgtcagttccttcgctctcggcgattttgtctac
ttcttcttccgagagattgcagtcgagtatctgaactgcgggaagactctgtattctcgt
gtggcccgcgtgtgccggcatgacaaaggaggcccgcacaagttcaggaacaagtggacc
tcttacttgaaatcgagactcaactgctctgtgtccggcgacttccccttctacttcaat
gagattcaggccacaactgaacctgttgaagggcggtatggaggtcatgcaaccaccctt
ctgtatggtgtcttcaccaccccagagaactcaatcccaggatcagcagtgtgtgctttc
acatttcaagacattatggatacatttgaggggccattcaaagggcaggcctctgtgaat
gctaactggctgcctgttcatggaactcaggtacctgaaccaagacctggacagtgtgta
aaggactcgagcactctgcctgatgtcactctgaacttcatcaagtcacactcactcatg
gacgaagctgtgcctgcattctttggccagcctatactcattagcaccagcttccactac
agtggtcgcttcacatccatagcagtcgatcagcaagttaaaactcctgataacaaatat
tatgatgtactttttattggcactgatgatggcaaagtgatcaaggccatcaacacaaag
tctgcagactcatacgaggatgtggaacccttcatcatagaagatatcaccgtcttcccc
tcaaatatggctgtcacttctcttcagatcatcaaacccaaaggaaagccaccacggcta
cttgttagttcacgatcaaggatacactccattcctttgagccgatgtcagaccaacaag
attactgaatgcagtgagtgtgtagccttgcaagacccttattgtgcttgggacaagaac
aagaacaaatgtcacacttacacatctggcaaggaaatgatccagaatgtaagcgaaggt
gtgcacaccgactgtggcaatactgagaaaaaagttaagccgcctgcacactctgcctct
atcaatcgggagtcttcaggcacacttcctcccattcacagccagcctgatgttggtggt
atgtttgaaattctagaccatgatataacgagggcccagaccgtaccgcagcagttcact
gcggagactctagctattgctgttgcctcagccaccatcggagctctcattcttggcttc
atcactggtttcttctgtggcaagaagtgcaacaaagatgaggacaaccaactctacgca
gacactgactatgagtattttgatcagagacaaaatcccaatccccacctgactggagaa
ctgcaagaagaagtgacgtatgcagagcctgttctagttcctcagacactcaataaacct
gtaaacctcatgctaaacatgtcccccaaagctactctgaagactcctggttcaaatacc
cctggagccaatgtggggacgttaggtgcccccatgggaccatccctagggcttcctacc
actggggtatcagctggaccccatgacatcccactgcattatacaccggagtcgtattca
acccacggcactctgcgctcctcggagaaatatggaacccggggacgtgaccaccgacca
cgagactacgatcacaggctggtggatggatactcgaccacccgctctgtcaagaaggtg
tacctgtga
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