Penaeus vannamei (Pacific white shrimp): 113803772
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Entry
113803772 CDS
T06111
Name
(RefSeq) tetratricopeptide repeat protein 21B-like isoform X1
KO
K19673
tetratricopeptide repeat protein 21B
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pvm03037
]
113803772
Cilium and associated proteins [BR:
pvm03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
113803772
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARM_TT21_C
ARM_TT21_N
ARM_TT21_2nd
TPR_19
ARM_TT21_5th
ARM_TT21
ARM_TT21_4th
TPR_2
TPR_14
TPR_16
TPR_1
TPR_7
TPR_8
ANAPC3
TPR_12
CFAP70_TPR_C
TPR_17
TPR_6
TPR_11
TPR_CcmH_CycH
CFAP70_mid_TPR
TPR_4
TPR_21
RMD1-3
TPR_Slam
Fis1_TPR_C
PRP6_TPR
TPR_MalT
TPR_Myxo
TPR_Psidin_N
TPR-S
FAT
Wzy_C_2
PLU-1
RMD9_mid
Motif
Other DBs
NCBI-GeneID:
113803772
NCBI-ProteinID:
XP_027210397
LinkDB
All DBs
Position
23:complement(36357703..36370237)
Genome browser
AA seq
1323 aa
AA seq
DB search
MSEADAVFKGKIHYYGREQYYQAMQNESVAATKKFGNDPVYRFYSAVSHLLQGQTQEAIR
QLQPLQNDQDVMLGTLLALIYAHRHCQVVDKEAVTMLDAKLKEERKRAPESCLYYAAMFL
LLSGKVDKAREYIDRMLKLNPEDLAGLTLKGWVELFAGRESKIKNTLQLFEAVLQRSPKN
IDALFGKAKYYENRSSYKESMETLNVLVVAYPDFTGPLVEKMKVYLSEQEWDQSMDAATR
VLSVDSHNIEALKHKTLYALCRQGNYDEAAQALRDLYSEMDRSEPNNASLFVHMAQLFSR
ICGRNRLVLEETFMMASKAAKIDTGNAEYLTEVGYQCLLQGRNKEATKYYKNATKLDESS
VAALTGIISCQLLEGQVDVAEQQLEFLKEVQRSLGASPDILYLSAVLGRMKNQNPDTILA
LLTEAIDNHFKNHRGMAFGSTYLAALNPDFLLLIVHECLLYAPNQPSDTATTTEVPPVVK
RALLVLDAITRACPALLTALVLSARTKFVTGDVKGASTILQHVLDEIDSTSSDAHLLMAQ
IQLHQGNFKQAQQSLEVGLSYNFEVREQPTYHLVRARVMKKQGQYQEAINTLKSCLNLAN
TRPTTTKGSRNKAELTLPDRASVFLELCDAYRLNDQPNEAASIMTQAMTEFQGTGEEIRL
NIASADLALMRGDVEHALAMLRSIGPDQPYYLEARDKMANIYLNNLKDKRMFATCYREVV
EKNPTPQSYLMLGDAYMSIQEPDRAIEVYEQAQKRNPRDSVLACRMGMALVKTHQYGKAI
NYYKEAIKSGSSNQLRYDMAELQMRLKQYDKSEKTINQALEVEAINHSNLTSMLTQAKLL
NLLAKVHERAGHFDQALSTLSKAKDVQVKVLKRAQVELPDSVAEQKQLAGSMCSKMAEHA
ANQREFDQAIRLYKEALQYDPEHAPTLLALAKLYMQINDLDQCQYTCMTLLRSDKENDSA
TVMMADLSYRRNEYDTAMFHFQQLLDRRPAYFPALARLVEVMRRTGTLDETNPYLDRAEQ
ATLKPYMDSGFNFCKGLYEWYVGNPNAALKYFNKARKDQEWGQRAIYNMIEICLNPDNDT
IGGETFESVDSEVNQSGARDTLDMAIRTADKLLKELSPKPGDQQVSHQILSNFLLLATKQ
KANAERALQDFMNIASQESYKNHVGAILGMATAYMILKQTPRARNQLKRVAKSIWNFEDA
EYLERCWLLLADIYVQTGKYDMATDLLKRVLQHNRSCMKAYEYMGFIMEKEQSYRDAAYN
YEQAWKFSGNTNPMIGYKLAFNYMKAKRYVDAIDVCHTVLNKHPEYPRIRKDILDKSRAS
IRV
NT seq
3972 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagctgacgctgtatttaagggcaagatccactactatggaagagagcagtat
tatcaagcaatgcaaaatgaatctgtggcggcaacaaaaaagtttggcaacgatcctgtg
tatcgcttctactcagcagtgtcgcatcttttgcaaggccagacacaggaagcgattaga
cagttgcaaccattgcagaatgaccaagatgtcatgctgggaacacttcttgcattgatc
tatgctcatcgacactgccaagtagttgacaaagaagctgttactatgttggatgctaag
ctcaaagaagaaagaaaaagggctccagaatcttgtttgtattatgctgccatgttcctc
cttctctctggaaaagtggacaaagcacgagaatatattgatcgcatgttgaaactaaac
cctgaagatcttgctgggctcacattaaaaggctgggtggagctgtttgctggtagagag
agtaaaatcaaaaacacactccagttgtttgaggctgtacttcaaaggtccccaaagaat
attgatgctctcttcggaaaagcaaagtactatgaaaatcgcagttcttacaaagaatcc
atggaaactctgaatgtccttgttgttgcataccctgatttcaccggaccacttgtagag
aagatgaaggtgtatctctcagaacaagaatgggaccagtctatggatgcagctacaaga
gttcttagtgtagactctcacaatattgaagccttgaagcataaaaccttgtatgcactg
tgccgccaaggtaactatgacgaagcagctcaggcacttcgagatttatacagtgaaatg
gataggagtgagccaaacaacgcatctctttttgttcatatggctcagttgttttcaaga
atttgtggaagaaatcgtcttgtgttagaagagactttcatgatggcaagcaaagctgca
aaaattgatacagggaatgcagaatacctcacagaagtgggttatcagtgtctattacaa
ggtcgcaacaaggaagccactaagtattacaagaatgctacgaaattggatgagtcatct
gtggcagctctcacagggataatctcatgtcagctgttagaggggcaggtggatgttgca
gaacagcagttggaatttttgaaagaggtacagcggagcctcggggcatcaccggatatc
ctttacctgtctgctgttttagggcggatgaaaaatcagaatcccgacacaatattagct
ttactgacggaagcaattgacaaccacttcaagaaccatcgaggaatggcctttggttcc
acatacctggcggctctgaatcctgacttcttgcttctcattgtccatgaatgtctcctc
tatgctccaaatcagccaagtgataccgcaacgacaactgaggtgcctcctgttgtgaaa
cgagcattacttgtactggatgccattacccgtgcatgtcctgccctccttactgctctt
gtgctctctgctcgtacaaagtttgttactggtgacgtgaaaggagcatcaacaatactc
cagcatgtgttagatgaaattgattcaacaagttctgatgcacacttgctgatggcccag
attcagctccaccaaggaaacttcaagcaagctcagcagagcctggaagtgggactctca
tataactttgaggtaagagagcaaccaacataccacctagttcgagcaagggttatgaaa
aagcagggacagtatcaagaagctatcaatacactgaaatcctgtttgaaccttgcaaat
accagacccacaacaactaaaggaagccgcaataaagctgagctgactttgcctgacaga
gcatcagtatttttagaattatgtgatgcttaccggctcaatgaccaacctaatgaggca
gctagtatcatgacacaggcaatgacggagtttcagggaactggtgaagaaatcaggcta
aatattgccagtgcagacttggccttaatgcgtggagatgttgaacatgctcttgccatg
ctgcgatctattggacctgatcagccgtactacctggaagctagagacaagatggctaat
atttatcttaataatctcaaagacaagcgaatgtttgctacttgttatagagaagtagtt
gaaaagaatccaacgccccagagctacttaatgttgggggatgcctacatgtccattcaa
gaacctgaccgtgccattgaggtttatgaacaggctcagaaacgtaacccaagagattcg
gtgttagcatgtcgcatgggcatggcacttgtgaagacgcatcagtatggaaaagctatc
aattattacaaggaagcaataaagagtggaagcagtaaccagttacgatatgatatggct
gagctgcaaatgaggctgaagcagtatgataaatcagagaagaccattaaccaggcactg
gaagtggaagccatcaatcattccaaccttacttctatgcttactcaagcaaagctcctc
aaccttcttgcaaaggttcatgaaagggcaggtcattttgatcaagctctttcaactctt
agtaaggccaaggatgtgcaagtaaaagtcctcaagagagcacaggtagagctgccagac
tccgtagctgagcagaagcagttagctggcagcatgtgcagcaagatggctgaacatgct
gcaaaccagcgtgagtttgatcaagctattaggttgtacaaggaagctcttcagtatgat
ccagaacatgctcctacacttttggccttagcaaagctttatatgcaaattaatgacttg
gatcagtgtcagtacacttgcatgacactgctgagaagtgacaaagaaaatgacagtgcc
acagtcatgatggctgacttgtcataccgacgaaatgagtatgatacagctatgtttcac
ttccaacagttacttgacaggcgtccagcatatttcccagcattagctcgtcttgtagag
gttatgcgacgaactggaaccttagatgagacaaatccatatcttgatcgggctgagcaa
gctacccttaagccatacatggactctggtttcaacttctgtaaaggcttatatgaatgg
tatgtaggaaatcccaatgccgcattgaagtacttcaataaagcacggaaggatcaagaa
tggggtcaaagagcaatttataacatgattgaaatttgcctgaatccagataatgacacc
attggaggcgagacttttgaaagtgtggacagtgaagtcaaccagtctggtgcaagagac
actttggacatggcaattaggacagcagataaactcctgaaggaactgagtcccaaacct
ggtgatcagcaagtttctcatcagattctaagtaatttcctcttgttggcaacaaagcag
aaggccaatgctgagcgagcactgcaagattttatgaacattgccagccaagaaagttac
aagaatcatgttggggccattcttggtatggctacagcatacatgatattaaagcagact
ccacgtgctcgaaatcagctaaagcgagtagctaaatcaatttggaattttgaggatgca
gaatacctggagagatgttggttactgttggcagacatatatgtgcagactggaaaatat
gacatggctacagaccttctcaagcgtgtcttacagcacaaccgatcttgtatgaaagct
tatgaatatatgggtttcatcatggagaaggaacaaagttatcgggatgctgcatacaac
tatgaacaagcttggaagttcagtggaaatacaaatccaatgataggatacaagctggca
ttcaattacatgaaagccaaaagatatgtagatgcaatagatgtgtgtcatactgttcta
aataagcaccctgagtacccaaggatacgcaaagatattctggataaatcacgagcaagc
attcgagtttaa
DBGET
integrated database retrieval system
