Penaeus vannamei (Pacific white shrimp): 113804180
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Entry
113804180 CDS
T06111
Name
(RefSeq) caldesmon
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWC2L_2nd
VWC
Motif
Other DBs
NCBI-GeneID:
113804180
NCBI-ProteinID:
XP_069977688
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Position
5:complement(21429083..21452450)
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AA seq
1234 aa
AA seq
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MAHEMRGSLKDEDAKSFPTPSFALQPLECRWNPRSPHSQTYSSSSTSFTPQDSHPSPAAS
QCFDAFSLECPQRLPASCMHQSSTADRSPYHNLVTAHKNDGNLLGLSSRALSFRTHLLRR
VFSVSYAIGHTILMFVSLSNKISSTSKARKYKNKVTCLVITLPLPAPAAIHGVALAAAST
SFTPGERAEEGSAGRVYFSQSRELGETAPRSQLRAKAHAPARSSLTVDRLAHSLADDLIG
LPAAAMWRRGFLVLLGVAAALAGPISRQVGVSDKVRIVSRNESSVCVIDEEVYAEGEYLP
TADPCEECQCKPPGFACFVISCEYKPGCRALQRSGLCCPEFRCDCEWDGAVYHNGEPVPN
LANPCETCICSGGEVECSVIQCGWRNDCEGVYTDGACCPSYDHCPPKDAVEANEAVTQVS
QAQEQVEVEASEAGIQASQDQEHVGVQANEAVTEASQAQEQAEVEANETVTEASQAQEQA
EVEANEAVTEASLAQEQAEVEANEAITEASQAQEQAEVEAITEASQAQEQAEVEANEAIT
EASQAQEQAEVEANEAITEASQAQEQAEVEANEAITEASQAQEQAEVEANEAVTEASQAQ
EQTEVEANEAVTEASQAQEQAEVEANEAVTEASQAQEQAEVEANEAVTEASQAEVEANEA
ITEASQAQEQAEVEANEAITEASLAQEQAEVEANEAVTEASQAQEQAEVEANEAITEASQ
AQEQAEVEANEAITEASQAQEQAAVEANEAVTEASQAQEQAEVEANEAVTEASQAQEQAE
VEANEAVTETSQAQEQAEVEANEAVTEASQAEVEANEAVTEASQAQEEAEVAASEVSQDE
IISGLSRSDLVTEQEVSEGTSGVKVETNEAVTEASQAQEQAKFEANAAIIEASQAQEQTE
VEANEAITEASQAQEQAEVEANEAVTEASQAQEQAEVEANEAVTEASQAQEQAEVEANEA
VTEASLAQEQAEVEANEAITEASQAQEQAEVEANEAITEASQAQEQAEVEANEAITEASQ
AQEQAEVEANEAITEASQAQEQAEVEANEAITEASQAQEQAEVEANEAITEASQAQEQAE
VEANEAVTEASQAKVEANEAVTELIPEASVAEQETSLDINDLSKQQTQENGTEEEIISEP
IVEASNTDDDEYWKKMTRNSSLPQTEETSPASESTEATATEAIDKQIEKVAEKYGLKPTK
TTTHAQSKSRAQINELREKRSFVDSVAHYVASFF
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atggcacatgagatgagggggtcattaaaggacgaagacgcaaaatctttccctactcct
tcctttgctctgcagccactcgagtgcagatggaacccccgatcaccacattcacagacg
tactcctcctcgtccacctccttcacgcctcaagactcgcatccatcacccgctgcaagc
caatgctttgacgcgttttccctggagtgtccccagcgcctgcctgcatcatgcatgcac
cagagctccactgcagaccgcagtccgtaccacaacctcgttacggctcacaaaaacgat
ggcaacctccttggcctctcctcccgagctctgtctttcaggacgcaccttcttcgccgg
gtcttctcggtgtcatacgccatcggtcacacaatactcatgtttgtatcattaagcaat
aaaatttctagtaccagcaaagctagaaaatacaaaaataaagtaacttgtctcgtcatc
acccttcctctgccagcgcccgcggccatacacggcgtcgccctggcagcggcttccacc
tccttcaccccgggcgagagagcagaggaggggagtgcgggccgcgtttacttcagtcag
tcgcgggagctcggggaaaccgcaccaagaagccagctccgtgctaaagctcacgctcca
gccaggtcttcactcactgtcgatcgcctcgcgcactcgctcgcagacgatctcatcggg
cttccagcagcagcgatgtggcgtcgcggattccttgtgctcttgggcgtggccgccgcc
ctggccggtcccatcagccgccaggtgggcgtgtcggataaggtcagaattgtctccagg
aacgaaagctctgtgtgtgtgatcgacgaagaagtttatgcggagggcgagtacctaccc
accgccgacccgtgcgaggaatgccagtgcaagccgccgggctttgcttgctttgtgatc
agttgcgagtacaagccgggctgtcgcgcccttcagcggtccggactttgttgcccggag
tttcgatgcgactgcgaatgggacggcgccgtgtaccataacggagagccggtgcctaac
ctggccaacccttgcgaaacgtgcatatgctccggcggtgaggtggagtgttcggtaatc
caatgtgggtggaggaatgattgcgagggcgtctacacggatggtgcctgctgtccttcc
tatgatcattgtcctcccaaggatgcagttgaggcaaatgaagctgtgactcaagtttct
caggctcaagaacaagttgaagttgaggctagtgaagctggaatccaagcatcccaagat
caagagcacgttggtgttcaggccaatgaagctgtcactgaagcatctcaggctcaagaa
caggctgaagttgaagccaatgaaactgtcactgaagcatctcaggctcaagaacaggct
gaagttgaagccaatgaagctgtaactgaagcatctctggctcaagaacaggctgaagtt
gaagccaatgaagccataactgaagcatctcaggctcaagaacaggctgaagttgaagcc
ataactgaagcatctcaggctcaagaacaggctgaagttgaagccaatgaagccataact
gaagcatctcaggctcaagaacaggctgaagttgaagccaatgaagccataactgaagca
tctcaggctcaagaacaggctgaagttgaagccaatgaagccattactgaagcatctcag
gctcaagaacaggctgaagttgaagccaacgaagctgttactgaagcatctcaagctcaa
gaacagactgaagttgaagccaacgaagctgttactgaagcatctcaggctcaagaacag
gctgaagttgaagccaacgaagctgttactgaagcatctcaggctcaagaacaggctgaa
gttgaagccaatgaagctgttactgaagcatctcaggctgaagttgaagccaatgaagct
ataactgaagcatctcaggctcaagaacaggctgaagttgaagccaatgaagccataact
gaagcatctctggctcaagaacaggctgaagttgaagccaatgaagctgtcactgaagca
tcccaggctcaagaacaggctgaagttgaagccaatgaagccataactgaagcatctcag
gctcaagaacaggctgaagttgaagccaatgaagccataactgaagcatctcaggctcaa
gaacaggctgcagttgaagccaatgaagctgttactgaagcatctcaggctcaagaacag
gctgaagttgaagccaatgaagctgtcactgaagcatctcaggctcaagaacaggctgaa
gttgaagccaatgaagctgttactgaaacatctcaggctcaagaacaggctgaagttgaa
gccaatgaagctgtaactgaagcatctcaggctgaagttgaagccaacgaagctgttact
gaagcatctcaggctcaagaagaggctgaagttgcggccagtgaagtttctcaagatgaa
attatatcaggcttatcccgcagtgatctggtgaccgaacaagaggtaagtgaaggaaca
tcgggtgtgaaagttgagaccaatgaagctgtaactgaagcatctcaggctcaagaacag
gctaagtttgaagccaatgcagccataattgaagcatctcaggctcaagaacagactgaa
gttgaagccaatgaagctataactgaagcatctcaggctcaagaacaggctgaagttgaa
gccaatgaagctgtcactgaagcatctcaggctcaagaacaggctgaagttgaagccaat
gaagctgtcactgaagcatctcaggctcaagaacaggctgaagttgaagccaatgaagct
gtaactgaagcatctctggctcaagaacaggctgaagttgaagccaatgaagccataact
gaagcatctcaggctcaagaacaggctgaagttgaagccaatgaagctataactgaagca
tctcaggctcaagaacaggctgaagttgaagccaatgaagccataacggaagcatctcag
gctcaagaacaggctgaagttgaagccaatgaagctataactgaagcatctcaggctcaa
gaacaggctgaagttgaagccaatgaagccataactgaagcatctcaggctcaagaacag
gctgaagttgaagccaatgaagccataactgaagcatctcaggctcaagaacaggctgaa
gttgaagccaatgaagctgttactgaagcatctcaggctaaagttgaagccaatgaagct
gtaactgaacttatccctgaagcttctgttgctgaacaagaaacttcccttgacatcaat
gatttgtccaagcaacaaactcaagaaaatggaacagaagaggaaattatttctgaacca
attgttgaggccagtaacaccgacgacgatgaatattggaagaagatgaccaggaactct
tcattgccacagactgaggaaacttcacctgcctcagaatcaacagaagctactgccaca
gaagccattgacaaacaaattgaaaaggttgccgaaaagtatggactgaaaccaacaaag
accacaacacacgctcagagcaagtcacgagcacagattaacgaactgagggagaagaga
agtttcgttgatagtgtcgcccactacgttgcaagcttcttttaa
DBGET
integrated database retrieval system