Penaeus vannamei (Pacific white shrimp): 113804184
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Entry
113804184 CDS
T06111
Symbol
Ercc1
Name
(RefSeq) DNA excision repair protein ERCC-1 isoform X1
KO
K10849
DNA excision repair protein ERCC-1
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03420
Nucleotide excision repair
pvm03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
113804184 (Ercc1)
03460 Fanconi anemia pathway
113804184 (Ercc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvm03400
]
113804184 (Ercc1)
DNA repair and recombination proteins [BR:
pvm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
113804184 (Ercc1)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rad10
HHH_5
HHH_2
HHH
5_3_exonuc
UPF0758_N
Motif
Other DBs
NCBI-GeneID:
113804184
NCBI-ProteinID:
XP_069970380
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Position
35:complement(1013818..1024037)
Genome browser
AA seq
377 aa
AA seq
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MNGNFDLDPGEEPGKDNEMIYEHQKNSRRRDSDSEDCPYTKQARNEETGKQTTENHTYGT
VSQEMSAAEENAGDAPAAASSVSGESKIKSGYVDIKKMQETSGASSVFSKAFSNLKKSEF
YEEPPPEVKSASELNNAKNAASGGTKPATKNCVIVSSRQRGNPILKSIRNVPWEYGEIVP
DYTMGSTTCALFLSLRYHNLNPNYVHDRLKQLGRQYELRVLLVLVDVKDPHHELKQLTKI
CVMADMTLMLAWSNEEAGRIIEVYKMFEHKPPDLIMEKQDGNPYSMLIDALTSIRSINRT
DAMTLLSNFGSLEKILAATQEELAFCPGLGPQKATKLHKVLKQPFKKNDTRKKVNTQPQK
VSSGSSQTKEVEDATEN
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgaacggaaactttgatcttgatccaggtgaagaacctggaaaagacaatgaaatgata
tacgaacaccagaaaaacagcagaagacgtgacagtgatagcgaagattgcccatacacc
aaacaagcaagaaacgaagaaaccggcaaacagaccacggagaaccatacctacggaaca
gtatctcaagaaatgtcagcagcagaggagaacgcaggagatgctccagcagcagcttca
tctgtctcgggtgaaagcaaaattaaatctggatatgttgatatcaagaaaatgcaagag
acttctggagcgtcctcagtgttttctaaggccttcagtaatctgaagaaatctgaattt
tatgaggaacctcctccagaagtcaagagtgcgtcagaactcaacaatgcaaaaaacgca
gcatcaggaggaacaaaacctgccaccaaaaattgtgttattgttagctcaagacagaga
gggaacccgatacttaaatcaataagaaatgtcccatgggagtacggagagattgttcct
gattacacaatgggcagtacaacctgtgccttgttcctgagtttgcgataccacaacctg
aaccctaattacgtacatgatcgtctaaagcagcttggcaggcagtatgagctacgagtg
ctattagtgctggttgatgtgaaggacccccaccatgagctgaaacagttgaccaaaatc
tgcgtgatggctgacatgaccctaatgctggcttggagtaatgaagaggctggcagaatc
attgaagtgtataaaatgtttgagcacaagcctccagacctcatcatggaaaagcaagat
ggcaatccatactccatgttaatcgacgccctcacatcaatcagatccatcaatcgcaca
gatgccatgaccctcctttcaaactttggatcactggaaaaaatcctggctgccacacag
gaggagctggccttctgccctggtcttggtccgcagaaagctaccaagctgcataaagtt
cttaagcaacccttcaagaaaaatgacacccggaagaaggtcaacacccagccgcagaag
gtgtcatcaggctcgagtcaaacaaaggaagtggaagatgcaacagaaaactag
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