Penaeus vannamei (Pacific white shrimp): 113804207
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Entry
113804207 CDS
T06111
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR isoform X1
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm04137
Mitophagy - animal
pvm04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
113804207
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
113804207
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvm04121
]
113804207
Enzymes [BR:
pvm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
113804207
Ubiquitin system [BR:
pvm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113804207
Multi subunit type E3
ERAD complex
113804207
LMBR1L-GP78-UBAC2 complex
113804207
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUE
zf-RING_2
zf-C3HC4_2
G2BR
zf-C3HC4
zf-rbx1
zf-RING_11
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
zf-RING_16
RING_XB3-XBAT31
Prok-RING_4
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
113804207
NCBI-ProteinID:
XP_069979143
LinkDB
All DBs
Position
6:complement(43522484..43558882)
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AA seq
672 aa
AA seq
DB search
MPVVLDRLPLPNLTWYTGLSVLLLSCSVYYAGVQVALNPNWKEKLLEKNNVSENHHQQEE
GEVSLYHVLDLEGASQEREMTPYLIPEIISFMFHEPLCIWTLINMAYCILILLGTLIQRL
VFGELRVSEQQHIKDKFWNFVFYKFIFVFGVMNVQAMDEVVLWCSWFSVLGFLHLLAQLC
KDRFEYLSFSATTPRRTHVRLLGLLGIILTLATFCLLICVVVGCHSGINTFAFMVAECIL
LIVRTLYVITRYSIYLWDITHEGLWEKRGRYVYMTELVFELSELVIDMVHHIHMLVWGNM
FLTMASLVICMQLRLLFYQLQHKVKSHRNYLRVLQLMNMYPEISGMDILSEESTCAICWE
HLETGRRLPCTHLFHASCLLAWLHQDLSCPTCRHKLHKPEQNEVASLSGTLLNGLLPAGE
ENDLRDDSGVGEVPHGAGGAFPSPAAPEGSPGTPGWRYVSWLPSFSVEQSHTQLPRHHQP
NSQPASTSQLDNLARQVQQMFPDVSYSDILEDLQHTHSLEVTIDNILEQRLVNPPPMFTS
HDGPSPVFDVQKEDEKSHQPLSEPEEIKEEEEDFVDASPTPSRPLSLPVPFELDAATTED
PSDTESEGSGIGVGISGAGGRFSKSPQEREQMLAQRKTELLSQARRRFVAKPKVMVNGME
NSQTDCDSLADS
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgcccgttgtgttagacagactacccttgcccaacctcacatggtacactgggctgagt
gtcctgctgctctcgtgttctgtgtactatgcaggtgtacaggtggctctcaaccccaac
tggaaggagaaactgcttgagaagaacaatgtctcggagaatcatcatcagcaagaggaa
ggcgaggtgtccctctaccatgtcctcgacctggagggtgcctcgcaggagagggagatg
acaccctacctcattccagagatcatcagctttatgttccatgagcccctgtgcatttgg
accttaatcaacatggcctactgcatactcatccttctgggcaccctgatccagcgcctc
gtctttggggagctcagggtgtccgagcaacagcacatcaaagacaagttctggaatttc
gtgttctacaaattcatctttgtctttggcgtcatgaatgtgcaggccatggacgaagtg
gtgctttggtgctcctggtttagtgtcctgggtttcctgcacctcctcgcacaactctgc
aaagaccgctttgaatatttatccttctcggccacaactccacgtaggacacacgtgcga
ctcttggggctcctgggcattattcttaccctggcaactttctgcctgttgatctgcgtt
gttgtgggatgtcattcagggataaacacatttgccttcatggtggcggagtgtatactc
ttgatagtgagaaccctgtatgtgataacccggtacagcatctatttatgggacatcact
cacgagggactttgggaaaagagagggaggtatgtgtacatgacggagctggttttcgaa
ctaagcgagctggtgatcgacatggtgcatcatatccacatgttggtatgggggaatatg
ttcctgacaatggcttctcttgtgatatgtatgcagctgcgactcctcttctaccagctg
cagcacaaagtcaagtcacacaggaactaccttagggtgctccagctcatgaacatgtat
ccagaaatttctggcatggacattctgtcggaggagagcacgtgtgccatatgctgggag
cacctggaaacaggcaggagactaccttgcacacaccttttccatgcctcttgtttgctg
gcatggctgcatcaagacctttcatgtccaacatgcagacacaaactgcacaaaccagaa
cagaatgaagttgcttctctgtctgggacacttctcaatgggcttttacctgctggagag
gaaaatgaccttcgggatgacagtggtgtaggagaggttcctcatggcgctggaggtgca
ttcccttctcctgctgctcctgagggctctccaggtactccaggctggcggtatgtgtct
tggctacccagcttcagtgtagagcagagccacacacaattaccacgccatcaccagccc
aactctcagcctgcgtctacatctcagcttgacaatcttgccagacaggtccaacaaatg
ttcccagatgtctcatattcagatatattggaagatcttcagcatacacacagcctagag
gtgacaattgacaacatcctggagcagcgtttagtcaaccctccaccaatgttcacgtca
catgatggtcccagcccagtgtttgatgtgcaaaaggaagatgaaaagagccaccagcct
ttgagtgagccggaagaaataaaggaggaggaggaagattttgtagatgcatctcctact
ccgtcacggcccctgagcctaccagtgccctttgagttagatgcagccacgacagaggat
ccaagtgacacagagtctgaaggaagtggcataggtgttggaatctctggagctggtgga
cggtttagcaaatcgccccaagaacgagagcagatgctggctcagcgcaaaaccgaatta
ctctcacaagcccgccgacgttttgtggctaagccaaaggtgatggttaatggtatggag
aattcacaaacagactgtgatagcttagcagactcctga
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