Penaeus vannamei (Pacific white shrimp): 113804346
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Entry
113804346 CDS
T06111
Name
(RefSeq) splicing factor 1
KO
K13095
splicing factor 1
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113804346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvm03041
]
113804346
Spliceosome [BR:
pvm03041
]
Complex A
Other components
Complex A specific factors
113804346
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
Ribosomal_60s
Adeno_PIX
DUF7573
KH_KRR1_2nd
Motif
Other DBs
NCBI-GeneID:
113804346
NCBI-ProteinID:
XP_027211000
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All DBs
Position
8:15302729..15344428
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AA seq
679 aa
AA seq
DB search
MSGANSTPLGRMNPAIGAGKKPTVTGGSSLLKPSYMSTLPNTTSVGSSTAAAAAAAAAAA
AAATAAINQNAAKRESESSYDSEREERKRRRKSRWQGDEKDKTFIPGMPTVLPSNMSKDQ
EEAYLLQLQIEELSRRLRSNDLGISPNPEDRSPSPEPIYNNEGKRLNTREYRTRKKLEDD
RHTCIQRMMKINTDYKPPADYKPPVVKVSDKVMIPQEEHPDINFVGLLIGPRGNTLKAME
KDTGAKIIIRGKGSVKEGKVGRKDGGPMPGEDEPLHAYVTASNPESVKKAVDKIKEIIRQ
GVEVPEGQNDLRRMQLRELALLNGTLRENDGPRCSNCGSNAHKSWQCPDKPNVTNNVVCT
SCGGTGHIARDCRQRRGPGAPATVDRQKIDEEYMSLMAELGEGPPPPQNTELTTKRPAAV
PTTRSLFDRPQGAPRPLMAPPPRSEPQATPNNQFAANSQNQGSMNQQNSWNSNQMGQGAP
RPLLGNSNGPPNLNQPPPGMPWQQQQQQQQQQQPQQQQAPNSFPGVPPPNLLQAPPPPPP
PTTQNGQQQQQQPSWMSQAPPGPPGAPQGPQGPPGGHGGPHGGPHGGPPHGPPPQMNHWQ
GPPPGPHHGPPGMGCPPPGPVPPPRPVGPPPGWGWNGPPQPVGPPPPPPPGGPGGPGPRG
PGGVDLGSLLSAPPPPPPS
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtgcgaacagtacacccctcgggagaatgaatcccgccattggggccgggaaa
aagccaactgttactggaggttcctcgctcctcaaaccctcatacatgagcactctgccc
aatacaacttctgttggttcttctactgcagcagcagccgccgccgccgccgctgcagct
gccgcagcaacggctgctataaaccagaatgcagccaaacgagagagcgagtccagttat
gatagtgagcgggaggagagaaaaagaagaaggaaatcacgctggcagggagatgagaag
gacaaaacattcattccaggcatgccaactgttctccccagcaatatgtccaaggatcag
gaggaagcatatttactgcagctgcagattgaagaattaagtcgccgtcttcgctccaac
gatctgggcatctcacctaatcctgaagacaggtctccatcacctgagccaatttacaac
aatgagggaaagaggctgaatactagagaatacaggactcgtaaaaaactagaagatgat
cgccatacttgcatacagagaatgatgaagattaacacagactacaaacctcctgctgac
tacaagccacctgtagttaaagtgtctgacaaagtgatgattccccaagaagaacaccca
gacatcaattttgttggtcttctaattggtcctcgtggaaatacactgaaagctatggag
aaagacacaggtgcaaagataataattagaggcaaaggatcagttaaggaaggcaaggtt
ggccgtaaagatggaggtccaatgcccggtgaggatgagcctctccatgcttatgtaact
gccagtaaccctgagagtgtcaagaaagctgttgataaaatcaaggaaataattcgacaa
ggtgttgaagtcccagaaggccagaatgacttgaggaggatgcagttaagagagcttgca
ctcctgaatggtactcttcgtgaaaatgatggaccgagatgctcaaactgtggttcaaat
gctcacaagtcctggcagtgccctgacaaacctaatgttacaaataatgtagtttgcacg
agctgtggaggaactgggcatattgctagagactgtcgacaacgacgtgggccaggagct
cctgcaactgttgatcggcaaaagattgatgaagaatacatgtctctaatggctgagtta
ggtgaaggtccccctccacctcaaaatactgagctcactactaagaggccagcagcagtt
ccgacaactagaagtctctttgatcgaccacaaggagcaccaaggcctctgatggctcct
ccacctcgttctgaaccccaggctactccaaataatcagtttgcagccaacagtcagaac
caaggtagtatgaatcaacagaattcttggaattccaatcagatgggacagggagctccg
agaccattgttaggaaacagcaatgggcctcccaatctaaatcagccaccaccaggaatg
ccatggcagcagcagcagcagcaacaacagcagcaacagcctcaacagcagcaagctcct
aattccttcccaggagtaccgccacccaatctcctacaagcaccacctccacctccacca
cctactacacagaatgggcagcaacagcagcagcaaccaagttggatgagtcaagctcca
ccaggtcctccaggtgctccacagggacctcagggtccacctggaggtcatggtggccca
catggaggtccacatggaggaccaccacatggtcctcctcctcaaatgaaccattggcaa
ggtccccctccaggacctcatcatggtccaccaggaatgggttgccctccaccaggacca
gtgccaccacctcgtcctgttggaccaccacctggctggggctggaatgggccaccacag
ccagtgggacctccacccccacctcctccaggtggcccaggaggacctggtccccgtgga
ccaggtggtgtagatctagggtccctcttgtcagcaccacccccaccaccaccatcatag
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