KEGG   Penaeus vannamei (Pacific white shrimp): 113804867
Entry
113804867         CDS       T06111                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA ligase 3
  KO
K10776  DNA ligase 3 [EC:6.5.1.1]
Organism
pvm  Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pvm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    113804867
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pvm03400]
    113804867
Enzymes [BR:pvm01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     113804867
DNA repair and recombination proteins [BR:pvm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     113804867
SSDB
Motif
Pfam: DNA_ligase_A_M LIG3_BRCT DNA_ligase_A_C BRCT_2 RNA_ligase mRNA_cap_enzyme BRCT
Other DBs
NCBI-GeneID: 113804867
NCBI-ProteinID: XP_069976376
LinkDB
Position
Unknown
AA seq 1035 aa
MFGSVLRVSRHLAFIVSSTPSTQITRKVSFRSAAYHQNFGWKTHASRFDFVLHTLLKVQN
CSLKKLNTAFGFNILSCARMSSFPFCAEYDKRGQAKCKKCKEKCEKGELRIGKIVTNPFS
ESGGDMKQWHHVNCIFETFKRARATTKKIEDPVDDIEGWENLEEDDQKKIRALIDDLQNE
IANKKTTPKKQTPQKKTPSKAGQQQFGKKAAGTPDKPTAGVSRVPSAVRNDPGMDPMHKD
NSFREFRRLCANVAEESSYTGKTNIVATFLKNGANKDGFQGDLRLWVKLLLPGVIKRVYN
LQSKQLIKLFSQLFNTNQEEMLEDLEQGDIAETVRNFFEQSAMLPPVKKATLSIQDVDQF
LEELTGMTREEEQSYVLKKIAKRCTANDLKMVIRLIKGDLRINAGAKHILDAVHNEAYEA
FQTTRNIDAVMDQIILSKTTGETLKMKAQVMTPVLPMLAEACKSVDYAXKKCPSGVMYSE
IKYDGERVQVHKKDGKFLYYSRSLKPVMPHKVSHFKEYIPKAFPYGKDLILDAEVLMMDT
KSGNPLPFGTLGVHKKSEFQDATVCLFVFDCLHYNGEDLMDKPIADRKKILEENMVEIKN
HIMLSEMKKIKRKEDLRDMINRVLKQGLEGLVLKDVNSVYEPGKRHWLKVKKDYLNDGAM
ADTADLVVLGAWYGTGKKGGMMSVFLMGCYDARIKKWCTVTKVHTGHDDATLARLQTELD
MVKISQDSERVPAWLKCTKTMIPDFVAADPKKSPVWEITGAEFTRHQIHTADGISIRFPR
VTRERSDKTWEQATDLAYLQELYKKSRECSDLEALTSERTDDDDDNGKKSGDSGSSTPIK
VQASSPKVSNVSAAFASPKTLSPDKAKGREKIQRTLSAFVKMDRTKPENEDEIKKEKMEH
SGTVLGKRHSDENRDRQPNKKLNKYGASESETHQTLNELPSAGLRHPTKNPLPDIFIGIQ
VGIPDTVPKVADMKRYIIAYGGDVLPDYQASEATHLVVDKEDKWPSSWRGRRISPEWIWD
SIKLQRLQSSRIYSV
NT seq 3108 nt   +upstreamnt  +downstreamnt
atgtttggaagtgtgctcagagtttcaaggcaccttgctttcatagtctctagtacccct
tctacccaaattacaagaaaagtatcatttagaagtgctgcctatcaccaaaactttggt
tggaagacacatgcttctagatttgattttgtgctacatacacttctgaaggtacagaat
tgcagcctcaagaaactaaacactgcttttggatttaatatccttagttgtgcaagaatg
tcatcattccctttctgtgctgagtatgataaaagaggacaagccaaatgcaagaaatgc
aaagaaaaatgtgaaaaaggtgaactcaggattggaaaaattgttacaaacccatttagt
gaatctggtggtgatatgaaacaatggcaccatgtgaattgcatttttgaaacatttaaa
cgtgctcgtgctactactaaaaaaattgaagaccctgtagatgatattgaaggttgggaa
aacctggaggaagatgatcagaagaagattagagctttgattgatgaccttcagaatgaa
atagccaacaagaaaactacaccaaagaagcagactcctcagaagaaaactccttctaaa
gcaggtcagcagcagtttggaaaaaaagcagcaggaactccagacaaaccaactgcagga
gtatcaagagtgccatcagcagtgaggaatgaccctggtatggacccaatgcacaaagat
aattcttttagagaatttcgtcgactgtgtgcaaatgtcgctgaggagtccagttacacg
ggcaagacaaatattgtggcaacttttttgaaaaatggagctaacaaagatggttttcaa
ggtgacctgcgactctgggttaagcttcttctaccaggagtcataaagagagtgtataac
ttacaatcaaaacagctcattaagcttttctctcagttatttaatacgaaccaagaggaa
atgctggaagacttggaacaaggtgatattgcagaaacagttcgcaatttctttgagcag
tctgctatgcttcctcccgttaagaaggcaacactgtcaattcaagatgtagatcagttt
ctagaggaactgactggaatgacaagagaagaagaacagtcatatgtgctcaaaaagatt
gccaaaaggtgcacagcaaatgatttaaaaatggtaattcgtcttattaagggagatcta
cgtattaatgctggagcaaaacacatcttggatgcagtgcataatgaagcttatgaagcc
tttcaaacaacacgaaacatagatgctgtaatggaccagattatcctttccaaaacaact
ggtgaaacgctgaagatgaaagcccaggtcatgactccagtattgcctatgttggcagag
gcatgtaaatcagtggattatgctnttaaaaaatgcccaagtggagttatgtattctgaa
ataaagtatgatggtgaaagagttcaagttcacaaaaaggatggaaaattcttgtattat
tctcgctcactgaaaccagtgatgccgcacaaggtctctcactttaaagaatacattcca
aaggcatttccctatggcaaggatcttattctcgatgctgaagtgttaatgatggacacc
aagtcaggaaaccctcttccttttggcactcttggtgtccacaaaaaatcggagtttcaa
gatgcgactgtctgtctttttgtgtttgactgcttacattacaatggagaagatttaatg
gataaaccaatagcagatagaaaaaaaattcttgaagaaaatatggttgagataaaaaat
cacatcatgttgtctgaaatgaagaaaataaagagaaaggaagacctgcgtgacatgatc
aaccgtgtcttaaagcagggattagaaggcctggtactgaaggatgtgaatagtgtatat
gaaccagggaaacgacactggcttaaagtaaagaaagattatttaaatgatggtgccatg
gctgacacagcagacttggttgtcttgggtgcctggtatggaacagggaagaaaggagga
atgatgtcagttttcttaatgggatgttatgatgcaagaataaagaagtggtgtacagtc
acaaaggtccacacaggtcatgatgatgcaacattggcacgcttacagacagagctagat
atggttaagatcagtcaagattcagaacgtgtgccagcatggctaaagtgtaccaagact
atgatcccagattttgtggcagctgaccccaagaaatcaccagtatgggaaataactggt
gcagagtttacacgacatcagattcacacagcagatggcatctctatcaggtttccaaga
gttacaagagaacggagtgacaaaacatgggaacaagccactgacttagcatatttacaa
gaactatataagaaatctagagaatgctcagatttggaagctctgacttctgaacgaaca
gatgatgatgatgataatgggaagaagagtggggactctggatcttctaccccaataaaa
gttcaagcaagtagccccaaagtatctaatgtatctgcagcttttgcaagtcccaaaacg
ttgagcccagataaggctaagggaagggaaaagattcagagaactcttagtgcttttgta
aagatggacagaacaaagccagaaaatgaagatgaaataaaaaaagaaaagatggaacac
agtggaacggtattaggaaagaggcactcagatgaaaacagagacaggcagccaaataaa
aagctgaataagtatggtgcctctgaaagtgaaactcatcaaacgctaaatgaacttccc
tcagctggtctcagacaccccacaaaaaatccacttccagatattttcattggaattcag
gttggaataccagatactgtgccaaaagtagcagatatgaagagatatatcattgcatac
ggcggagacgtgttgccagattaccaggcgagcgaagccacacatttggtggtggataaa
gaagacaaatggccttcatcgtggcgcggccggaggatttcgcctgagtggatttgggac
agcatcaagttacagaggctccagtcgtctcgcatatacagcgtctaa

DBGET integrated database retrieval system