Penaeus vannamei (Pacific white shrimp): 113804881
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Entry
113804881 CDS
T06111
Name
(RefSeq) general transcription factor 3C polypeptide 3-like isoform X1
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvm03021
]
113804881
Transcription machinery [BR:
pvm03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
113804881
TFIIIC, fungi type
113804881
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_14
TPR_2
TPR_16
TPR_19
TPR_1
TPR_11
TPR_CcmH_CycH
TPR_8
TPR_12
ARM_TT21_5th
Amino_oxidase
TPR_21
Motif
Other DBs
NCBI-GeneID:
113804881
NCBI-ProteinID:
XP_069973319
LinkDB
All DBs
Position
40:9639203..9664889
Genome browser
AA seq
1044 aa
AA seq
DB search
MTSRCKQTITTSALHACKGLMDSRHQPKASSTPKAMNSSIKISELSGRDQVEEEDEEQQG
NTHQNAYTDLMNMAPLNTAMTELLGRGELPVGAITSAHVGSTEEVLGLPYMESCVTLPEL
GGTDHVEVEMIEAEPGDNDENEYEDGQQNEYTKLLNMEPMSASMSEFLEHAQLGERSSTA
STSAISDEAEVLGLTHSIPTIEADEVGEESYLGMTAIEAAGEETEDDEDTLTEPLDKQSQ
EELINRLMTDGMSFSEVAALWGEDADADSDVEDTPAMALSKTEEKEDHAAEFEKELNEQQ
RYQLKRKGGGEKRRRRRLPAALQGLMGEANLRYARQEYDEAIKMCMEVIRQFSHSPEPYQ
TLGMIYEEKKMANKSLQFLLIAAFLSPDAEEWEKLADLSLHQGDFQQAVFCWGRAIKANP
QNLDYHWARCDLLERLGEKLKALKGYSHMLKYLRTDQGKDGLKLAKEIAKIHYENKDVHL
ARDAMETAFRKYPSYVTPEDVNLMLEVLMHQQEYTKCIEILINHAGVQLLNKNVGEEEFH
SRSLEEQLSQATECYVPADLLIDLHTKLTVSLIHVKAFEISAPLVEQLMNESVEEFGDLY
LDIAEAYMDVDFHEAALQLLRPLINSDHYNVAAVWLQYGESLAAVDQMEEAAEAYNKVVR
LAPQHAEARLTLSSILQSLGRLDEALLILNQESDFEPLDSQLLFQRCKILLDQNLVDEFI
NAAKLLFRRHFIHIRNRDEAEAMISNKKLSNKYEAIRELRRSKNESLEDNGPAYTGPDVS
IEDQWELFTSVCNILHEKKRFEELERMTFTALGSKEFMKDKERAREVEFMCLLACIYNES
SYFAYNIMRELVIKNPENERCWNLLNLIISKADDFRHNRFLLRLTHKHPDLVALGLLNGH
NCLVAGTYKYSLAEYTGAFKQDPSNPLIPLMLGLTFTHMACQKFSGKKHSLVVQACAFLN
TYVEMRGECQESMYNLGRAMHQLNLLPQAIHYYKQALNCQPVESLEGGPMLDLSREIAFN
LALIYQNSGSPDLARMYMYKYIQI
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcacgatgtaaacaaaccatcacaacatcggcgttacacgcgtgtaaagggctc
atggattcacggcatcaaccaaaagcttcatccacccccaaagctatgaattcaagtatc
aaaatatcagagctaagtggaagagatcaagtggaggaagaagacgaagagcagcagggg
aacacgcaccaaaatgcatatacagatcttatgaatatggctcccctaaatactgctatg
actgagctcctaggacgaggggagcttccagtaggggcaattacgtcggcacatgtggga
tccacggaagaagttttagggcttccctatatggagtcatgtgtcacactgccagaatta
ggagggacagaccatgttgaggtggagatgattgaggcagaacctggtgacaatgacgaa
aatgaatatgaagacgggcagcaaaatgaatacacaaagctgttgaatatggagccaatg
agtgcttctatgtctgagtttctggagcatgctcagctaggcgaaagatcctcaacagct
tcgacatcagctatttctgatgaagcggaagtattagggctgacacattccattccaaca
atagaagctgatgaagttggggaagagagttatttaggcatgactgccattgaagcagca
ggcgaggaaacggaagatgatgaagatacactgacggaaccccttgacaaacagagccaa
gaagaacttataaatcgcctcatgacagatggaatgtccttttccgaggttgcagctctg
tggggtgaggatgctgatgctgatagcgatgtggaagatacaccagcaatggcactgagt
aagacggaggagaaggaggatcatgcagcggaattcgagaaggaattaaatgaacagcaa
agatatcagttgaaacgcaaaggcggtggagagaagaggcgaagaaggcgtctgccagct
gccctccagggtctgatgggagaagccaacttgcgttatgctcggcaggagtatgatgaa
gccataaaaatgtgcatggaggtcattcgccagttttctcattctccagagccataccaa
acactaggcatgatctatgaggagaagaagatggcaaacaagagtctgcagttccttcta
attgccgctttccttagcccggatgctgaggagtgggagaaattggctgatttatcactg
caccagggtgacttccagcaagcagttttctgttggggccgagccataaaagcaaacccc
cagaaccttgactaccattgggctcgctgcgacctcttggagcgcctgggagaaaaactg
aaagcactaaagggctattcccacatgctgaagtacttgagaactgaccagggcaaggat
ggattaaagctagcaaaagagattgcaaagatacactatgaaaacaaagatgtccactta
gcccgagatgctatggaaactgcctttaggaaatacccatcctatgttaccccagaggat
gtgaacttaatgcttgaagtattaatgcaccaacaggagtatacaaagtgtatagagatt
cttattaatcatgctggggttcagcttttgaataagaatgttggtgaagaggaattccac
agtcgcagtttagaggaacagttatcacaggcaactgaatgttatgttcctgcagactta
ttgattgatcttcacacaaagttgactgtgtccctgattcatgtgaaagcatttgaaatc
agtgcaccactggttgagcagttgatgaatgaatcggtggaggaattcggtgacctgtac
ttagatatagctgaagcctacatggatgttgatttccatgaagctgcccttcagttgttg
cgtccactcatcaactcagatcactataatgttgctgctgtttggctccagtatggggag
agtttggcagctgtcgaccagatggaagaagctgctgaggcatacaataaggtggtgaga
ctggcaccgcagcatgctgaagcccgtctgactctctcatccatcctgcagtcgcttggc
cgcctggatgaagctctcctcattctgaaccaagagagtgactttgagcctttagactca
cagctcctcttccagcgatgcaagatcctgctggatcagaaccttgttgatgaatttatt
aatgctgctaagttgctgttcaggaggcattttattcacattagaaatcgagatgaggct
gaagccatgatcagcaacaagaagctgagcaacaaatatgaagccatccgagaactccgg
cgttccaaaaatgagagtctggaagacaatggaccagcttacacagggccagatgtgtct
atagaagatcagtgggaactctttaccagtgtgtgtaatatccttcatgaaaagaagagg
tttgaagaactagaaagaatgactttcacagcccttgggtctaaagaattcatgaaggac
aaggaacgtgcaagagaggtcgagttcatgtgtctcttagcctgtatctacaatgaaagc
tcctactttgcctacaacattatgagggagcttgtgatcaagaatcctgagaatgagaga
tgctggaacctactcaacctcatcatctccaaagcggacgactttcgccacaaccgtttc
ctgctacgcctgacccataaacacccagacctagtagccctcggattgcttaacggccac
aactgtttggtggctggtacctacaaatattccctagcagagtacacgggtgccttcaag
caagacccaagcaatcccctcattccactcatgcttggactaaccttcacccacatggcc
tgccagaaattcagtgggaagaagcactcactggttgtgcaggcctgtgcattcttaaat
acgtatgttgagatgcgcggagagtgtcaggaatcgatgtacaacttgggacgagccatg
caccagctgaatcttctcccacaggctatccactactacaaacaagcccttaattgccag
cctgttgaatcattggaaggaggccctatgttagacctctcaagggaaattgcattcaat
cttgcattgatatatcagaacagtggctctccagatttggcaagaatgtatatgtataag
tacatacaaatttag
DBGET
integrated database retrieval system
