Penaeus vannamei (Pacific white shrimp): 113804925
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Entry
113804925 CDS
T06111
Symbol
MED23
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23 isoform X3
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvm03021
]
113804925 (MED23)
Transcription machinery [BR:
pvm03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
113804925 (MED23)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
113804925
NCBI-ProteinID:
XP_027211641
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All DBs
Position
11:complement(4381953..4403634)
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AA seq
1527 aa
AA seq
DB search
MEEPVVKIAEAKTHEILADTLKVDVLQEALVNLLEVNPTEKDSAQLMTVCADLQRLFSES
SETGTNAGADAQKGAEAAKTQSNTTNEAAARIQEAGVRAIVSVLSCQNNCYRAHFLSSVL
LNLVNTNAVSPKVVCICLLADENLNTDHDIFWLMAFGLIKKIISGVDYKGVREIMKMCLD
RARQLPTNLRRSQLHLVEALIGVMSLIFDRSASLLPGYFIVNELLKLYPDYKNWPHWSMS
SLLTDFIDKFRRAAQMLSIVGRPKLRPIVEHSGQNSPSINSWKLDSLTLKFQLKGALPYS
PELLEAQPGLLRYILKQPYSREMVYAVIDIQKKQKQRCNALEEQLVELMVSALDDFSRSD
ALTGGAASASPSSGTAVATPDHHLCTCTHLSSLLIHFVLFQLISFPCLVMGLHAKLESKG
SNRGRDHLMWVLLQFLSGSIQKNPFSDFLPILRLIEVLYPENEPLPIPDYTDSRCALQMS
AMCILMHILKKAQTDNIKTPRMLPPVFKNHNEFLQSLAHNPQLPLMTAGATPDYRIALLV
NAYSTNQEYFQRPILTLSESIQGNQKSTVPMPGINCVALGSTTPLSMTLLDSLTVHVKMS
LIHNIGQHINKQAQHKSGVALAPALIETYARLLVYTEIESIGIKTFITNILPLVFKSHVW
SLLHALLEMFIYRIHHSPPQYRVQLLSTLHHLAAVPLNTMTQMTQLHLCMESVALRLITG
LGNSEVMPSLTRFFSPDTKPNLISTDSEELNRVLVLTMARAMHVTGCDTTGESARWCVDF
LKVVMTHTPHTWANHTIQCFPPVIADFYHQCAAPRENMQTLKKAVEEEYRKWMSMSNETD
IIAHFSLQHNTSPLFLCLLFKMVLDNDRVPPIAYKVLERVGPRQLAAHVRTLCDFLVLEF
SNSAGGQHVTKYVETMNAIIWVYNIVPIDRLMLCLALRTQEGSEAHVCFFIIQLLLLKPC
ELRNRVQEFVKENSPDHWRQSNWYEKHMAFHRKFPEKFSPESILAEQGTLTAQYQTLPIY
CSNVCLRFLPVLDIIIHRFLELHQVHKNLETILDRLGMLYKFHDRPITYLYNTFHYYENK
LRERPNLKRRLVVAVIMSQQEIHPQGWALTEAYHQYLARPQDDIAWNPDLSYYTSLVRRL
VHTMQGKAVFPSIEWRFNEFSSSGAHALHVSCVELMALPSNPTIVANMLMDVLLRGYCDI
PSGEMIEWVNAVGLILTWLPEPYWIVVHDRIIELLQHPTLATPGAGTLDPFTMLNLEQLE
SCLSDMNAALTLAIAHAFWHHASFGQVGRIPQLLRERIRPILTTEEQLVVVCHLVGPFLQ
RFNNESARKVFDVTKELYEALAKVDHSVTELKYMDPICDVFYHIKYMFTGDSIKTDVEGI
IRSLRPALQKRLRFITHLNLDSIENPTNNAPGSTTPAHTANTAASNTPTNATSNTGTVNN
TSNNTATAPVPGGNVNQTGSAGAAGSVLGTPASGLGSLSGMGSTLGQTSNVGSGVSGSGG
MSMGSLAAASSLASLLQDTSPVNSSIS
NT seq
4584 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaccggtggtgaaaatcgccgaggccaaaacccatgagatattggcggacacg
ttgaaagtagatgtccttcaagaagcactggttaatcttttagaagtaaacccaacagaa
aaagactcggcacaactgatgacagtctgtgctgacctccagaggttgttttcagaatct
tcagaaactggaacaaatgctggagcagatgcacagaaaggagctgaggctgccaaaaca
cagagtaatacaacaaatgaggcagcggctcgtatacaagaagctggagtgcgggccata
gtgtcggtcctgtcatgtcagaataattgctaccgtgcacatttcctttcctccgtcttg
ctgaatctcgtgaacacaaatgcagtctcaccaaaggttgtatgcatatgtctccttgct
gatgagaacctcaacacagaccatgacattttttggctcatggcatttggcctcatcaag
aagatcatcagcggagtcgactacaaaggcgtccgcgaaataatgaagatgtgcctagac
agagctaggcaactccctacaaacctgaggagatcacagctccaccttgttgaagccctt
attggcgtaatgagcttgatcttcgaccgcagcgcttccctcctgccgggctacttcatt
gtgaacgagctccttaagctgtatccagattacaaaaattggccacattggagtatgtcg
tcactcctgacagattttattgacaagttccgcagagcagctcaaatgctctctattgtg
gggaggcctaaattacgaccgattgtggaacattctggtcaaaatagcccgtcaatcaac
tcctggaagttggattccctgacactcaagttccagctaaagggagctctaccatacagt
cctgagctcctagaggctcagcctgggctccttcggtatatcctaaagcagccatattcc
cgggagatggtttatgccgtgatcgatatccagaaaaagcagaagcagcgctgcaatgcc
ctcgaggaacaactggtcgaactgatggtgtcagcgctggatgactttagccgaagtgat
gctttgactggaggtgcggcaagtgcttctcctagcagtggtacggctgttgctacgcct
gaccaccacctgtgcacctgtacacacctgtcatcattgctgatccactttgtcttgttc
cagcttatttcattcccttgccttgtcatgggcctgcatgcaaagctggaaagcaaaggc
tctaaccgaggcagggaccacctcatgtgggtgctgctgcagttcctgtcggggagcatt
cagaagaaccctttctcggacttcctccccatcttgaggctcatcgaggtgctgtaccca
gagaatgagcccctgccgattcctgactacacagactcacgatgcgccctgcagatgtcg
gccatgtgtattctcatgcacatcttgaaaaaagcacagactgacaacatcaagacgcca
cggatgctgcctccagtcttcaagaatcataatgaatttcttcaaagccttgcacataat
ccacaactaccactgatgactgctggagcaacgccggactatagaattgctctgctggtc
aacgcttattcaacaaatcaggaatatttccaacggccgatcctgacactgtccgaaagt
atccaaggaaaccaaaagtcgacagttccaatgcctgggatcaactgcgtagccctgggc
agtaccacccctctctccatgacactcctcgattccctaacagttcacgtcaaaatgagc
ctcatacacaatattgggcagcatataaataagcaagcacaacacaagtcaggagttgca
ctggcacctgcgctaatagaaacatatgcgagactgcttgtgtacactgagatagaaagc
atcggcattaagacgttcattaccaatatcctgcccttggtctttaagagtcacgtgtgg
agcctcttgcacgcgctcctagagatgttcatctaccgcatccatcactccccaccacag
taccgtgtgcagctgctttccaccctgcaccacctggcagctgtacctctcaacaccatg
acccaaatgacgcagctgcatctctgcatggaaagcgtggcactgcgtcttattacaggc
ttaggaaactcagaagttatgcccagcctaactcgcttcttctcccccgacaccaaaccc
aacttgataagcaccgattcggaggaactgaaccgcgtcctagtgctgaccatggcccgg
gcaatgcatgtaacaggctgtgataccacaggtgaatcagcaaggtggtgtgtcgatttc
ctaaaggtggtgatgacacacactccccacacttgggcaaaccacaccattcagtgtttc
ccgcctgttatagcagacttctaccaccagtgtgctgccccgagggaaaacatgcagaca
ctaaagaaagctgtagaggaagaatacagaaagtggatgtccatgagcaatgagacggac
attattgcccatttctcactgcagcacaacacttcccctctgttcctgtgtctcctgttc
aagatggtcttggacaatgatagagtaccacccattgcatacaaggtgctcgaacgcgtg
ggaccacgacaacttgcagcccatgtgcgcactctctgtgatttcctggtcttggagttc
tcaaacagtgcaggggggcagcatgtgacaaaatatgttgagacgatgaatgccatcatt
tgggtctacaacatcgttcctattgaccgactcatgctgtgtctggccctaaggacacaa
gagggtagtgaagcacatgtatgcttcttcatcatccaactgttgctgctgaaaccgtgt
gaactaaggaatcgtgtccaggaattcgtcaaggagaattcccccgatcactggcggcaa
agtaactggtacgagaaacacatggccttccaccgcaagttcccagagaagttttccccg
gagagcatcttagccgagcaaggaaccctcacggcacagtaccagactctcccaatctac
tgtagtaacgtctgtctcagattcctcccggtgttggacatcatcatccataggttcctg
gagcttcatcaggtgcacaagaacctcgaaaccatccttgataggctgggaatgctctat
aaattccacgaccgtcccatcacctacctttacaacacattccattattatgagaacaag
ctccgagagcgccccaacctcaagcgacgcctggtggtggctgtcatcatgtcccagcaa
gagatccatccccagggctgggcgctcactgaggcctaccatcagtacttggcgcgaccc
caagatgacattgcgtggaaccctgacctctcttactacacatcgctggtccgtcgcctt
gtgcacaccatgcaagggaaagcggtgttcccatctatcgaatggaggttcaacgaattc
tcaagtagtggggctcacgcgcttcatgtcagctgtgtggagttgatggccctcccaagc
aaccccaccattgtagccaacatgctcatggacgttctacttagagggtattgtgacatt
ccctcaggcgaaatgattgagtgggtgaatgcagtcggcctaattctcacctggctccct
gaaccttattggattgtcgttcatgaccgcatcattgagcttctccagcacccaaccctg
gccaccccgggtgcaggcacacttgatccatttaccatgctgaacttggaacagctggag
tcctgcctgagcgacatgaatgcggccctgacactggccatcgcgcatgccttctggcac
cacgcatcatttggccaagttggacggattccacagttattgcgagaacgtattcgcccc
atcttgacaacagaggagcagctagttgttgtttgccatcttgtgggtcctttcctccag
cgcttcaataatgagtctgcgagaaaagtcttcgacgtaaccaaagaactttatgaagca
ctggcaaaggttgatcacagtgtcacagagctgaagtacatggaccccatctgtgacgtc
ttctaccacatcaagtacatgttcaccggggactccatcaagaccgatgtggagggcatc
ataaggagcctaagaccagcattgcaaaagaggctgcgcttcatcacgcaccttaatttg
gattccattgagaacccaacaaataatgctcccggcagtacaaccccagcacacacagcc
aacactgccgctagcaacacccccaccaatgccaccagcaacactggcactgtcaacaat
accagtaacaatactgcaacagctcccgtacccggaggcaacgtcaaccagactggcagt
gcaggggcggcagggtctgtcctcggaactcctgcttcaggcctaggctcccttagcggc
atggggtctaccctgggccagacaagcaacgtgggcagtggggtctcaggatcgggggga
atgagtatggggtcccttgctgcggcctcaagtctagcctccctcctgcaggatacctct
cccgttaactcttccatatcataa
DBGET
integrated database retrieval system
