Penaeus vannamei (Pacific white shrimp): 113804925
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Entry
113804925 CDS
T06111
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23-like isoform X1
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvm03021
]
113804925
Transcription machinery [BR:
pvm03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
113804925
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
113804925
NCBI-ProteinID:
XP_027211641
LinkDB
All DBs
Position
Unknown
AA seq
1519 aa
AA seq
DB search
MEEPVVKIAEAKTHEILADTLKVDVLQEALVNLLEVNPTEKDSAQLMTVCADLQRLFSES
SETGTNAGADAQKGAEAAKTQSNTTNEAAARIQEAGVRAIVSVLSCQNNCYRAHFLSSVL
LNLVNTNAVSPKVVCICLLADENLNTDHDIFWLMAFGLIKKIISGVDYKGVREIMKMCLD
RARQLPTNLRRSQLHLVEALIGVMSLIFDRSASLLPGYFIVNELLKLYPDYKNWPHWSMS
SLLTDFIDKFRRAAQMLSIVGRPKLRPIVEHSGQNSPSINSWKLDSLTLKFQLKGALPYS
PELLEAQPGLLRYILKQPYSREMVYAVIDIQKKQKQRCNALEEQLVELMVSALDDFSRSD
ALTGGAASASPSSGTAVATPDHHLCTCTHLSSLLIHFVLFQLISFPCLVMGLHAKLESKG
SNRGRDHLMWVLLQFLSGSIQKNPFSDFLPILRLIEVLYPDYTDSRCALQMSAMCILMHI
LKKAQTDNIKTPRMLPPVFKNHNEFLQSLAHNPQLPLMTAGATPDYRIALLVNAYSTNQE
YFQRPILTLSESIQGNQKSTVPMPGINCVALGSTTPLSMTLLDSLTVHVKMSLIHNIGQH
INKQAQHKSGVALAPALIETYARLLVYTEIESIGIKTFITNILPLVFKSHVWSLLHALLE
MFIYRIHHSPPQYRVQLLSTLHHLAAVPLNTMTQMTQLHLCMESVALRLITGLGNSEVMP
SLTRFFSPDTKPNLISTDSEELNRVLVLTMARAMHVTGCDTTGESARWCVDFLKVVMTHT
PHTWANHTIQCFPPVIADFYHQCAAPRENMQTLKKAVEEEYRKWMSMSNETDIIAHFSLQ
HNTSPLFLCLLFKMVLDNDRVPPIAYKVLERVGPRQLAAHVRTLCDFLVLEFSNSAGGQH
VTKYVETMNAIIWVYNIVPIDRLMLCLALRTQEGSEAHVCFFIIQLLLLKPCELRNRVQE
FVKENSPDHWRQSNWYEKHMAFHRKFPEKFSPESILAEQGTLTAQYQTLPIYCSNVCLRF
LPVLDIIIHRFLELHQVHKNLETILDRLGMLYKFHDRPITYLYNTFHYYENKLRERPNLK
RRLVVAVIMSQQEIHPQGWALTEAYHQYLARPQDDIAWNPDLSYYTSLVRRLVHTMQGKA
VFPSIEWRFNEFSSSGAHALHVSCVELMALPSNPTIVANMLMDVLLRGYCDIPSGEMIEW
VNAVGLILTWLPEPYWIVVHDRIIELLQHPTLATPGAGTLDPFTMLNLEQLESCLSDMNA
ALTLAIAHAFWHHASFGQVGRIPQLLRERIRPILTTEEQLVVVCHLVGPFLQRFNNESAR
KVFDVTKELYEALAKVDHSVTELKYMDPICDVFYHIKYMFTGDSIKTDVEGIIRSLRPAL
QKRLRFITHLNLDSIENPTNNAPGSTTPAHTANTAASNTPTNATSNTGTVNNTSNNTATA
PVPGGNVNQTGGAGAAGSVLGTPASGLGSLSGMGSTLGQTSNVGSGVSGSGGMSMGSLAA
ASSLASLLQDTSPVNSSIS
NT seq
4560 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaccggtggtgaaaatcgccgaggccaaaacccatgagatattggcggatacg
ttgaaagtagatgtccttcaagaagcactggttaatcttttagaagtaaacccaacagaa
aaagactcggcacaactgatgacagtctgtgctgacctccagaggttgttttcagaatct
tcagaaactggaacaaatgctggagcagatgcacagaaaggagctgaggctgccaaaaca
cagagtaatacaacaaatgaggcagcggctcgtatacaagaagctggagtgcgggccata
gtgtcggtcctgtcatgtcagaataattgctaccgtgcacatttcctttcctccgtcttg
cttaatctcgtgaacacaaatgcagtctcaccaaaggttgtatgcatatgtctccttgct
gatgagaacctcaacacagaccatgacattttttggctcatggcatttggcctcatcaag
aagatcatcagcggagtcgactacaaaggcgtccgcgaaataatgaagatgtgcctagac
agagctaggcagctccctaccaacctgaggagatcacagctccaccttgttgaagccctt
attggcgtaatgagcttgatcttcgaccgcagcgcttccctcctgccgggctacttcatt
gtgaacgagctccttaagctgtatccagattacaaaaattggccacattggagtatgtcg
tcactcctgacagattttattgacaagttccgcagagcagctcaaatgctctctattgtg
gggaggcctaaattacgaccgattgtggaacattctggtcaaaatagcccgtcaatcaac
tcctggaagttggattccctgacgctcaagttccagctaaagggagctctaccatacagt
cctgagctcctagaggctcagcctgggctccttcggtacatcctaaagcagccatattcc
cgggagatggtttatgccgtgatcgacatccagaaaaagcagaagcagcgctgcaatgcc
ctcgaggaacaactggtcgaactgatggtgtcagcgctggatgactttagccggagtgat
gctttgactggaggtgcggcaagtgcttctcctagcagtggtacggctgttgcaacgcct
gaccaccacctgtgcacctgtacacacctgtcatcattgctgatccactttgtcttgttc
cagcttatttcattcccttgccttgtcatgggcctgcatgcaaagctggaaagcaaaggc
tctaaccgaggcagggaccacctcatgtgggtgctgctgcagttcctgtcggggagcatc
cagaagaaccctttctcggacttcctccccatcttgaggctcatcgaggtgctgtaccca
gactacacagactcacgatgcgccctgcagatgtcggccatgtgtattctcatgcacatc
ttgaagaaagcacagactgacaacatcaagacgccacggatgctgcctccagtcttcaag
aatcataatgaatttcttcaaagccttgcacataatccacaactaccactgatgaccgct
ggagcaacgccagactatagaattgctctgctggtcaacgcttattcaacaaatcaggaa
tatttccaacggccgatcctgacgctgtccgaaagtatccaaggaaaccaaaagtcgaca
gttccaatgccaggaatcaactgcgtagccctgggcagtaccacccctctctccatgaca
ctcctcgattccctaacagttcatgtcaaaatgagcctcatacacaatattgggcagcat
ataaataagcaagcacaacacaagtcaggagttgcactggcacctgcgctaatagaaaca
tatgcgagactgcttgtgtacactgagatagaaagcatcggcattaagacgttcattacc
aatatcctgcccttggtctttaagagtcatgtgtggagcctcttgcacgcgctcctagag
atgttcatctaccgcatccaccactccccaccacagtaccgcgtgcagctgctctccacc
ctgcaccacctggcagctgtacctctcaacaccatgacccaaatgacgcagctgcatctc
tgcatggaaagcgtggcactgcgtcttattacaggcctaggaaactcagaagttatgccc
agcctaactcgcttcttctcccccgacaccaaacccaacttgataagcaccgattcggag
gaactgaaccgcgtcctagtgctgaccatggcccgggcaatgcatgtaacaggctgtgat
accacaggcgaatcggcaaggtggtgtgtcgatttcctaaaggtggtgatgacacacact
ccccacacttgggcaaaccacaccattcagtgtttcccgcctgtcatagcagacttctac
caccagtgtgctgccccgagggaaaacatgcagacactaaagaaagctgtagaggaagaa
taccgaaagtggatgtccatgagcaatgagacggacattattgcccatttctcactgcag
cacaacacctcccctctgttcctgtgtctcctgttcaagatggtcttggacaatgataga
gtaccacccattgcatacaaggtgctcgaacgcgtgggaccacgacaacttgcagcccat
gtgcgcactctctgtgatttcctggtcttggagttctcaaacagtgcaggggggcagcat
gtgacaaaatatgttgagacgatgaatgccatcatttgggtctacaacatcgttcctatt
gaccgactcatgctgtgtctggccctaaggacacaagagggtagtgaagcacatgtatgc
ttcttcatcatccaactgttgctactgaaaccatgtgaactaaggaatcgtgtccaggaa
ttcgtcaaggagaattcccccgatcactggcggcaaagtaactggtacgagaaacacatg
gccttccaccgcaagttcccagagaagttttccccggagagcatcttagccgagcaagga
accctcacggcacagtaccagactctcccaatctactgtagtaacgtctgtctcagattc
ctcccggtgttggacatcatcatccataggttcctggagcttcatcaggtgcacaagaac
ctcgaaaccatccttgataggctgggaatgctctataaattccacgaccgtcccatcacc
tacctttacaacacattccattattatgagaacaagctccgagagcgccccaacctcaag
cgacgcctggtggtggctgtcatcatgtcccagcaagagatccatccccagggctgggcg
ctcactgaggcctaccatcagtacttggcgcgaccccaagatgacattgcgtggaaccct
gacctctcttactacacgtcgctggtccgtcgccttgtgcacaccatgcaagggaaagcg
gtgttcccatctatcgaatggaggttcaacgaattctcaagtagtggggctcacgcgctt
catgtcagctgtgtggagttgatggccctcccaagcaaccccaccattgtagccaacatg
ctcatggatgttctacttagagggtattgtgacattccctcaggcgaaatgattgagtgg
gtgaatgcagtcggcctaattctcacctggctccctgaaccttattggattgtcgttcat
gaccgcatcattgagcttctccagcacccaaccctggccaccccgggtgcaggcacactt
gatccattcaccatgctgaacttggaacagctggagtcctgcctgagcgacatgaatgcg
gccctgacactggccatcgcacatgccttctggcaccacgcatcatttggccaagttgga
cggattccacagttattgcgagaacgtattcgccccattttgacaacagaggagcagcta
gttgttgtttgccatcttgttggtcctttcctccagcgcttcaataatgagtctgcgaga
aaagtcttcgacgtaaccaaagaactttatgaagcactggcaaaggttgatcacagtgtc
acagagctgaagtacatggaccccatctgtgacgtcttctaccacatcaagtacatgttc
accggggactccatcaagaccgatgtggagggcatcataaggagcctaagaccagcattg
cagaagaggctgcgcttcatcacgcaccttaatttggattccattgagaatccaacaaat
aatgctcccggcagtacaaccccagcacacacagccaacactgccgctagcaacaccccc
accaatgccaccagcaacactggcactgtcaacaataccagcaacaatactgcaacagct
cccgtacccggaggcaacgtcaaccagactggcggtgcaggggcggcagggtctgtcctc
ggaactcctgcttcaggcctaggctcccttagcggcatggggtctaccctgggccagaca
agcaacgtgggcagtggggtctcaggatcggggggaatgagtatggggtcccttgctgcg
gcctcaagtctagcctccctcctgcaggatacctctcccgttaactcttccatatcataa
DBGET
integrated database retrieval system
