Penaeus vannamei (Pacific white shrimp): 113805140
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Entry
113805140 CDS
T06111
Name
(RefSeq) uncharacterized protein
KO
K24526
RNA-binding protein 12
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvm03041
]
113805140
Spliceosome [BR:
pvm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
113805140
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
113805140
NCBI-ProteinID:
XP_069987360
LinkDB
All DBs
Position
2:complement(22503133..22561892)
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AA seq
1340 aa
AA seq
DB search
MSVIIRLQNLPWSANALDIREFFKGLQIPEGGVHIVGGELGDAFIAFGTDEDARLAMQKT
GSTLKGIQVTLLLSSRSEMQKVIESARQQAMALQGYMAPAPMPSQKPPQPMPQAMSQQPP
PQQQVGPVGQMPPQNPYQQQQQQSASHMHYPSPMHQMSPDTRHSQLPPHIQNQSHLMQTP
PMANSGNNQLHPNHVPLHTHGGVDSHNQNHMHSSANQAEKKDDKKDSSATSSSKRDSKGR
DGRRRRSKSRSRSRSRSRDRDRRRRHRTRSRSRSRDRSGRSRRRSRSRERDRGRDRTRDR
SDREKDRLGRPGRDRGDRDSQDTLEMASPQESHMKEGSNGGIPGLGDIPSASMRGPLPSS
LTEPPKNSPIHTPSPASTPAYNTAPSFNSGGVYNAAMPFSGQSFNFLNMNVPPPNMVGSA
KFNESLEMDPDEESQMSKEASGSEYMSDQVGSHKSEQMFCQLRGDKSQIGAPMDGLPVHR
PESTGLLGDAPGEVPYGAFAGRGFGMPRSNEGFGYDRAPGNRPSSADGRNSDYESRGRDG
RMGSGRDSRDYRDVRGYREMDGREGRGTKDSREDREREDSDRRGNWGPRGDSRDERGNRW
DGQEDRESAGWSRGREGWGGRGDRDNWSGKSSRDSRDSWSDRDGGWSKREGRNWEDHDGY
YEDREDEENYEEVYEPMGRGGYRGRGMRGWDRGRGRGRGFGPRYGEYREGYPEGHPEDGY
GGYRGGYRGGYRGRGGGPGGYRDGEGDNSKFTCSVEIRNVPPGTSYRAIRELFHGIYVPN
NSIKLLADDQGNRLNVALLKFSQPRDALRAVRCSGKYLYDSPVDIMFISDSKYDTATDVN
MTQGKLNPGGKPGSSGFDEKSQDGSYICVSGLPDGCAENDVAQLFTRYKIMDIILERNRD
SLGTCYVRLQSSDEAQRAVDSVAGNAVLDGSQLKIELYSPDNASATKDLSMKSQLDQKLT
GNIVDSGDKDMESRNGDDGPGKHTPLGADLLTDSVVMKGVPKDTTEANIRDFFSDEGLVP
ERVHFCEPLEDGTHPVYVMFPLIQDARRAVGKSQQQLGKVKVQVELIAKPVVMSAMGLKF
DPLELIKKGQESLTKTDSHGDKPSDQSLEPSPDSMKMNSEHENSDSQKMDADNPMQRGQN
SKQPLIREPLLQHGQPLQPDKDSRKDDMHPKFDPYSGMGGMPRAPFRGGLMGHFPGAPRN
FRPRGDMRGGMHRMPGGMRDPGGFGRMRGPYPMMRESGDHAGGKETMGTAIPPEKFGKPG
CVVALGNVSYRATTDDILEFFHDFPDIRPVNVIRRYNEFNQPTADARVSLSSPQDAQRAI
KTLHRQYMCNRQIFLSLVQE
NT seq
4023 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtcatcattcgcctgcagaacctcccgtggtcggccaacgccctcgacattcgg
gagttcttcaaagggctgcagatcccggagggcggcgtgcacatcgtgggcggggagctc
ggagatgccttcattgccttcgggaccgacgaggatgcccgcctcgccatgcagaagacg
ggctccacactcaaaggtattcaggtgactttgctgctgtcctcgcgttcagaaatgcag
aaggtcatcgagtccgcccgccagcaggccatggctctccagggctacatggcccccgcc
cccatgccctcacaaaagccgccacagccaatgcctcaggcgatgtctcagcagccacct
ccgcagcagcaggtaggcccagtcgggcagatgccgccacagaatccctatcaacagcag
cagcagcagtcggcatcacacatgcattacccttcgcccatgcaccagatgtcgcccgac
actcgccacagtcagctgcctcctcacatacagaatcagagccatctcatgcagacgcct
cccatggccaattcggggaataaccaacttcaccctaatcatgtccccttgcacacacat
ggaggcgtcgactcgcataaccagaaccatatgcattcctcagctaaccaggctgagaag
aaagacgataagaaggattcttcagccacttcctcatcgaagcgagattccaaaggacgc
gatggccggcgtcggaggtccaaatcgcgaagcaggtctcgctccaggtcgagagaccga
gaccgtcgccgtcgccacagaacccgctcgagatctcgcagtcgggaccgcagcggccgc
agccggcgacgtagcaggagtagggagcgtgatcgtggaagagacaggactcgtgaccgc
agcgaccgcgagaaggatcgcctagggaggccagggcgtgaccgtggagaccgtgacagc
caagacactcttgaaatggcgtcaccccaagaatcccacatgaaggagggaagcaacgga
ggaatacccggccttggagacatcccaagtgcaagcatgaggggcccgctgcccagcagc
ctcacggagccacccaagaactcgcccatccacacaccctcacctgcctctacaccagca
tataatactgccccatccttcaattctggcggtgtctataatgcagccatgccttttagt
gggcagtcatttaacttcctcaatatgaatgttccacctccaaacatggtagggtcagct
aagtttaatgaatcattagagatggaccctgacgaggaaagccaaatgtcaaaagaggcg
tctggcagtgagtatatgtctgatcaggtgggaagtcacaaaagtgaacagatgttttgc
cagttgagaggcgataaaagccaaataggagccccaatggatggattgccagtacacaga
cctgaatctacaggactcttaggtgatgctcctggtgaagtcccttatggtgcctttgca
ggaagaggctttggcatgccgagaagtaatgaaggatttggttatgacagagctcctggc
aaccgtccgtcgtctgctgatggcagaaattctgattatgaatcaagaggtcgagatggc
aggatgggaagtggaagagacagcagagactacagagatgtgagaggatatagagagatg
gatgggagggaaggcagagggacgaaggattcgcgtgaggacagagaacgggaggattca
gatcgtcgtggcaactggggcccaagaggagattcgagggatgagcgtggcaacaggtgg
gacggccaggaagaccgcgagtcggcagggtggagccgggggcgagagggctggggtggg
cgtggggaccgtgacaactggtcggggaaaagtagccgtgactctcgtgacagttggagt
gaccgtgacggaggatggagtaagcgtgaaggccgcaactgggaagaccatgatggctac
tatgaagacagagaagatgaggaaaactacgaggaagtgtatgaacccatggggcgtggg
ggttaccgcggtcgaggaatgcggggctgggacagaggcagaggccgcggccgtggattt
gggccgcgatacggcgaataccgtgaaggttatccagagggtcatccagaagatggctat
ggaggataccgtggaggataccgtggtggttatcgtggccgaggtggaggccctggtgga
tacagggatggagagggagataactccaaattcacttgcagtgtggagatccgaaatgtg
cctcctgggacctcctatcgcgcaatacgagaacttttccatggtatctatgtacctaat
aacagcatcaaactccttgctgatgaccaaggaaatcgtctaaatgttgctcttcttaag
ttctcacagcctcgtgatgcactgagggctgttcgatgttctggaaagtatctgtacgac
agcccagtcgatataatgtttataagtgattctaagtatgacacagcaactgacgtaaac
atgacgcagggcaaactcaatcccggtggcaagccaggttcaagtggatttgatgaaaag
tcacaagatggctcttatatttgtgtatctggcctcccagacggatgtgcagagaatgat
gttgctcaattatttaccagatacaagataatggacattatcctggaaaggaatagggat
tctttaggcacatgttatgttcgactccagtcatcagatgaagcacagagagctgtagat
tcagttgcagggaatgcagtcctggatggcagtcaactgaagattgaactttattcccca
gacaacgcttcagctaccaaggatttgagcatgaaatctcaactagatcagaagttgact
ggtaatatagttgactcaggggataaagacatggagagtcgcaacggcgatgatggtcca
ggaaaacatacccctcttggtgctgatctacttacagactctgtggtaatgaaaggtgta
cccaaagacaccacagaagcaaatattcgagatttcttcagcgatgaaggtttagtccca
gaacgtgtgcatttctgcgagccccttgaagatggcacacaccctgtgtatgtcatgttc
ccattgatccaggatgcgcgtcgtgcagttggtaagagtcaacagcaacttgggaaagtt
aaagttcaagttgagttgatagccaaacctgttgttatgtcagctatgggtttgaagttt
gaccctctagaactcatcaagaaagggcaggagagtctgacaaagactgacagtcatgga
gataaaccatctgaccaaagtttagaaccatcgccagactccatgaaaatgaacagtgag
cacgagaacagtgactcgcagaaaatggatgcagataacccgatgcaaagagggcagaac
tccaaacagcctctcatccgggaaccgctcctccagcatggccagcctcttcaaccagac
aaggattcgcgcaaggacgatatgcacccgaagttcgacccatactctggcatgggtggg
atgccccgggcgcccttcagagggggcttaatgggtcacttccccggtgcacctcgtaac
ttcaggccgcgcggagacatgcgtggtgggatgcacaggatgccaggtggcatgcgtgat
ccaggaggattcggaaggatgcggggcccttaccctatgatgcgcgagtcgggagaccat
gcggggggcaaggagaccatgggcactgccatcccgccagaaaaattcggcaaaccaggg
tgtgtggtcgcgctgggaaacgtctcctaccgcgccacgacggatgatattctggagttt
ttccacgatttccctgacatccgaccggtgaacgtgatcaggagatacaatgaattcaat
cagccgactgctgacgcccgagtgtccttgtcttcgccccaggatgcgcagagggcaatt
aaaactctccacagacagtacatgtgcaaccgacagatcttcctctctctggttcaggaa
tga
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