Penaeus vannamei (Pacific white shrimp): 113805291
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Entry
113805291 CDS
T06111
Name
(RefSeq) patched-related protein 9
KO
K12385
Niemann-Pick C1 protein
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
pvm04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
113805291
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
113805291
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvm02000
]
113805291
Transporters [BR:
pvm02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
113805291
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sterol-sensing
Patched
MMPL
ACR_tran
Motif
Other DBs
NCBI-GeneID:
113805291
NCBI-ProteinID:
XP_027212085
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All DBs
Position
23:complement(11563269..11569830)
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AA seq
995 aa
AA seq
DB search
MATASKGNIISRINFCIVNGLEKAFYNYGVLIARHPAVFMCICLSLTAVCSIGLMKFRVE
ERPFKLWIPQDSDFIKVMEWQKDNFPAHFRIQMAVYEAENVLDKDVLLEMLRVHEAVVNT
STEDATWQSVCAKMPTITENWFGRKRKRRSLRKENISGVETVPVISSRAKREDSGLFDWS
TFLGRDTYCGFLDSIPLECMEHSILEIWGYDRDLLTDLTQEEIIYDVNNVDTSAVFGFPV
NFSQYLGGVEFDASGQIIKARASRQTWITEVNMTAIQAGDFVDDTGTGTEVDTESFQWEK
ELVMVVLDETERPKNISLYFMASASFGMIAGDTIIGDVQYLAVGFGVVFIYVQIMLGKFN
FVEQRPLLSLMGLNCVGMSVFMSYGICSAFDVPFGPVNNVLPFLLLGLGIDDMFVIMQAW
NNLTPKEKKKELPERIGLALKHAGVSITVTSVTDFAAFAIGSGTVLPALRSFCIFAAVGI
AAVYFFQATFFVAWFSLDQKRLEDNRHGLIWCWKLQNWSPNKCSQRDLCQTFFSDVYAKY
LLKLPCKVLVLFVTFALLAVSGWGLSNLRQEFNPVWFLPQNSYLFKFLMKQEYYYPTSGE
LGTIYFGHMNYLEELPKIDKLMIAMQENEDISEIDSWYLSYKKYWEKQGYEVPDPEETQE
EFLDQLSMFLHSPSGSKYQAKNFNFDGKVNCTDPAPPILASSIDFKHRPLSLSREKIKAM
DDLKAIVNSMNFSGFVEPYSRIYSGWETDKIIEKELYQNMGLAMAVVFLVTLILIANLVT
SLMVLLCVIMTLIDVGALMHWWGLTIDTVSCIDIVLAIGLCVDYAAHIGHTFMTQTGTRD
ERARLTVAKIGPAVLNGGFSTFLAFVFLANSDSHVFMTFFKIFFAVVLYGLLHGLVFLPV
LLSLIGPASYPKEKDDEEPADGEESCPFTPQRKSEEKNEEQDHSTNLLDNDTDLKNDPKS
GKCQETVSLRMSENSHDKSSLCVGEPSVQIVCSRT
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atggctaccgcatctaaaggaaatattatttcgcgaatcaatttttgcatagtaaatgga
cttgaaaaagcattttacaattatggtgttcttattgctcgtcatcctgcagtattcatg
tgtatatgcttgagtttgacagcagtatgctccattggtctcatgaaatttagggtggaa
gaacgaccctttaaattatggattccacaagactcagactttatcaaagtaatggagtgg
caaaaggataatttcccagcacattttcgaatacaaatggcagtttatgaagcagaaaat
gtgttggataaagatgtccttctggagatgctaagagtccatgaagctgttgtgaacaca
tcaacagaagatgcaacttggcagtccgtgtgtgccaagatgccaactataacagaaaat
tggtttggcagaaagagaaaaagaaggagtctcaggaaggagaatatttctggtgttgaa
actgttcctgtaatatcttcaagagctaaacgagaagacagtggactgtttgattggagt
acctttttaggtagagatacttactgtggttttcttgacagcatacctcttgaatgcatg
gagcatagcattctcgagatctggggatatgatcgtgatttattaactgatcttacccag
gaggagataatttatgatgttaataatgtagacacaagtgctgtgtttggttttccagtc
aatttctctcagtatcttggaggagtagaatttgatgcctcaggccagattatcaaggca
agagcttctaggcagacctggatcacagaagttaacatgactgctatacaagctggagat
tttgtagatgatacaggaactggtacagaggtagatactgaaagtttccagtgggagaag
gagctggtaatggttgttttggacgaaacagagagaccaaagaatatatctttgtacttt
atggcatcggcaagttttggaatgattgctggagatacaatcataggagatgtgcagtac
ttagctgttggctttggtgtagtctttatatatgtccaaataatgcttgggaaatttaac
tttgtggaacagagacctttactctctttaatgggtttaaactgtgtaggaatgtctgtg
tttatgtcctatggcatttgttcagcatttgatgtcccatttggcccagttaataatgtg
ctgcccttccttctccttggccttggaattgatgatatgtttgtcatcatgcaagcttgg
aataatctcacaccaaaggagaaaaagaaagagttacctgaaagaatagggcttgctctc
aagcatgctggtgtttccatcacagttacatcagtaactgattttgcagcatttgccatt
ggcagtgggacagttttgccagcacttagatccttttgtatttttgctgcagtaggtatt
gctgctgtctatttctttcaggctacattttttgttgcctggttttctcttgatcagaag
cgattggaagacaatcgacatgggcttatctggtgttggaaattacagaattggtctcct
aataagtgcagtcaaagggatctctgtcagacattctttagtgatgtatatgccaagtac
ctcttgaaactgccttgcaaggtgttggtactttttgtaacttttgccctcttggcagtt
tctggatggggcctgtcaaacttgcgccaggagtttaacccagtttggttccttcctcag
aattcttatctcttcaagtttttaatgaagcaggagtattactacccaacttcaggtgaa
cttggtacaatatactttggtcatatgaactacttggaggaactgcccaaaattgataaa
ttgatgattgcaatgcaggagaatgaagacataagtgaaatagatagttggtatttgagt
tataagaaatactgggaaaagcaaggttatgaagtgccagacccagaggaaacccaagag
gaatttttagatcagttgtcaatgtttttacattccccaagtggatcaaaatatcaagca
aagaacttcaactttgatggtaaagtgaactgtactgatccagctccacctattttagct
tctagcatagacttcaagcatcgaccattgtctctctctcgagaaaaaatcaaagccatg
gatgatttgaaggctattgttaatagtatgaattttagtggatttgtagaaccatattca
agaatttacagtggatgggaaactgataaaattattgaaaaagagctgtaccagaatatg
ggacttgctatggctgtagtgttccttgtgacacttattctaattgccaaccttgtaact
agtttgatggtgcttctttgtgtgataatgactttgattgatgtaggagcattaatgcat
tggtggggcctcactatcgacacagtgtcttgtattgacattgtgttagcaattggacta
tgtgtagactatgctgcacatattggccatacatttatgactcagactggcacaagggat
gaacgagctagactcaccgtagccaaaattggaccagctgttctgaatggaggcttcagc
actttcctggcattcgtattcttagcaaactcagattctcacgttttcatgacatttttc
aagatattttttgccgttgttttgtatggactccttcatggtcttgtatttttgcctgtt
ctattatcccttattgggccagcttcctatcccaaagaaaaagatgatgaagagccagca
gatggtgaagagtcgtgtccattcaccccccagaggaaatctgaagaaaaaaatgaagag
caagaccattccactaatttgttagacaatgatacagatctgaagaatgacccaaagagt
ggtaagtgccaagaaacagtaagtctaagaatgtcagagaatagccatgacaaaagtagt
ctttgtgtgggggagccaagtgtacaaatagtgtgtagtcgtacttag
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