Penaeus vannamei (Pacific white shrimp): 113805294
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Entry
113805294 CDS
T06111
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-1-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm04080
Neuroactive ligand-receptor interaction
pvm04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
113805294
04082 Neuroactive ligand signaling
113805294
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pvm04040
]
113805294
Ion channels [BR:
pvm04040
]
Ligand-gated channels
GABA-A
113805294
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
113805294
NCBI-ProteinID:
XP_069973797
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All DBs
Position
41:complement(6763311..7186120)
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AA seq
656 aa
AA seq
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MIGGDLTRRAVWCWWWWRWWVLAVLASTISASEGFSSTYSASSYSKNVTSLLDSLLSDYD
RRIRPGYGGPPTTIRVNMNVRSMGPFSEKQESYSMQLYLRQVWFDPRLRFNKTDLGKREF
SMNWMFAARLWKPDTFFINGKNSYAHKITAPNTFIRLQHDGQITWSLRLTVRASCKMHLR
KFPLDTQLCPLSLASYGYNATDIVYKWAPQLVTVDSDVSIAQYELVKITTNSTKVTVRRK
EEISILSVKFHLKRLTGFFLLQVYVPCILIVCCSWVAFWITKKDVPGRVCLGATTVLSLT
KIGFGGKSSMPKVSYPTSLDYFVILCFTFVFGAIVEYTVMHFLERSTNKRRKAMEQHRKE
VEERARAPEVQGEQRAAEKDATMLVTTTVKEDGVDIGSSLRETLKVPLTVVPLGVSAIDE
EQEDEGGARQAGSPTSSRAGDGSPLDTKSPLKEALKLPLSVVPGSLEAVKEGGEGEGDGL
RARNVAAAKREGEDPDSGAEGDRSVVSAEAGRPGEGWVSASDSGSVSSKSSLFRLRKDAS
AAAKKERLDSESDLTVIKVDIQADEEEEAPPPPRPYTVWQILTWKRKLMAEMSPANVIPS
EEDVLDRFSVIDLYARRIFPTAFFILFTVYWVMFNYYITDEFPHETKEPSDGLVVV
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgataggaggcgacctgacacgccgagcggtgtggtgctggtggtggtggcggtggtgg
gtgctggcggtgctggcgtccaccatctccgcctccgagggattcagcagcacctactcc
gcctccagctacagcaagaatgtcacgagcctcctggatagcctcctgtccgactacgac
cggaggattcgcccgggatacggaggtccgcccacgacaattagggtgaacatgaacgtg
cggtcaatgggtccgttcagcgagaaacaggagtcctattcgatgcaactgtacctccgg
caagtgtggttcgacccgcgcctccgcttcaacaagacggacctgggcaagcgggaattc
tccatgaactggatgttcgccgcccgcctctggaagcccgacaccttcttcatcaacggc
aagaactcctacgcccacaagatcaccgcgcccaacacgttcatcaggctgcagcacgac
ggccagatcacgtggtcgctaagattaacggttcgagccagctgtaaaatgcaccttcgg
aagtttcctttggacacgcagctgtgtccgcttagtttagcgtcttacgggtacaacgcc
acagacatagtatacaagtgggcgccccaactcgtgacggtggatagtgacgtcagcatc
gcccagtacgagttggtgaagattacgaccaactcgaccaaagtcaccgttaggagaaaa
gaagagatctcgatcctcagcgtcaaattccacctgaagaggcttaccggcttcttcctc
ctgcaagtgtacgtcccttgcatcctcatcgtgtgctgctcgtgggtcgccttctggatc
accaagaaggacgtcccgggccgcgtctgtctaggtgcaacgacagtgctttcactaacc
aagatcggtttcggaggcaagtcgtccatgcccaaagtctcgtacccgacgtctttagat
tacttcgtcatcctgtgctttactttcgtcttcggggccatcgtggagtacaccgtgatg
cacttcctcgagaggtcgactaacaagcgtcgcaaggccatggagcagcaccggaaggag
gttgaggagagagcccgagcgccagaggtccagggagagcaaagggccgccgagaaggac
gccacgatgctggtcacgacgacggtcaaggaggacggggtggacatcggctcgtcgctg
cgggagacgctgaaggtgccgctgacggtggtgcccctcggcgtgagcgccatcgacgag
gagcaagaggacgagggcggcgccagacaggcgggctcgcccacgtcgtcgagggcgggc
gacgggtcgccgctcgacactaagtccccgctgaaggaggcgctgaagctgccgctgagc
gtggtgccggggagcctggaggccgtgaaggagggcggcgagggcgagggcgacgggctg
cgggcgcgcaacgtggcggcggccaagcgcgagggcgaggaccccgacagcggcgccgag
ggcgaccgcagcgtggtgagcgcggaggcggggcgccctggcgagggctgggtgtcagcc
agcgacagcggcagcgtcagcagcaagagcagcctgttccggctgcggaaggacgcgtcg
gcggccgccaagaaggagcggctggacagcgagagcgacctgacggtgatcaaggtggac
atccaggccgacgaggaggaggaggcgccgccgccgccgcgcccctacaccgtgtggcag
atcctgacgtggaagcgcaagctcatggccgagatgtcgccggccaacgtgatcccgtcg
gaggaggacgtgctcgaccgcttctccgtcatcgacctgtacgcccgcaggatcttcccg
acggcgttcttcatcctgttcaccgtgtactgggtcatgttcaattactacataacggac
gagttcccccacgagaccaaggagccctcggacggcctcgtggtcgtatag
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