Penaeus vannamei (Pacific white shrimp): 113805556
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Entry
113805556 CDS
T06111
Symbol
ct
Name
(RefSeq) homeobox protein cut isoform X1
KO
K09313
homeobox protein cut-like
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvm03000
]
113805556 (ct)
Transcription factors [BR:
pvm03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
113805556 (ct)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUT
Homeodomain
Homeobox_KN
HNF-1_N
Motif
Other DBs
NCBI-GeneID:
113805556
NCBI-ProteinID:
XP_069979798
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All DBs
Position
7:32882147..33240058
Genome browser
AA seq
1495 aa
AA seq
DB search
MAAPGPDAQGGAGGENPGKDMAALHNLQSMDWLFKKERIFLLAQFWQQRATLAENEVHTL
KEQLDSIKCQKGVKESNNNNNNNNNNINSTNSNHNINKSTNTESNNDVVDSSEGSTERTG
RSTPVEDIIQSKEKEVRGASSSSSASALSLMEAAEVSKLVEDISRLQAALSGVKEATAAQ
MHAMEEQLEEKNRLIQRLELKLQDSSLDEAKRDLQSIREGRMVPEGLSLPPRSLESLLVD
RSKSEHDKIPTSEFGKQFHDVYGPLPPMSHSHLHPPLRPHLPPPLAPPPMASPLQPLAPH
PPPGTPLHHLLGEEWRRSLERSALDRHHLNSGQMSPDSGGGPVERSDSRESPIGDVSMKS
PSSMANGFPHETKSPFQPRDDRSPFKDEMPSMAFKFEDRITGESLIPKGDPMEARLQEIL
RFNMEKFCQQSLDTLCLARRVRELLSIHNIGQRLFAKYILGLSQGTVSELLSKPKSWDKL
TEKGRDSYRKMHAWATDDNAVYLLKSLIPKKACRRKPETGLTLNGLLTGTHKDSSGAFRG
PDDSVTEERIQHILTEASRAMTSSTATSQAGQQDQDSRSTDSKSPASSTHSPSSPLSRGD
SRSRIRKYDNDDIPQEKVARIYQEELVKLMSRPQEPQLPLPRDPQYPGILFPFLGQSLLF
NRSHEEVKLALDAYHQELSKLQGNAAVTGMGLGAVGLGMGGGGGLGVGVGGPSLGMGVGL
GAGGLHNGAQDLTMPKREQRNGDEEEEGRNPSVTSPFGPSRSKAETNLSSATTPLSNLVT
PITSIAATSGDDLSVSASPLQRMASITNSLMTGPPISTGSPLTQKPLKAVLPPITQQQFD
QYSNMNTEEIVKKVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREP
FIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGGYTAPPLYLVGGCPLPGGLAAPGCLPG
GLSTSGSPTLPSYTTGTSKPHHMKLPADIPKSMESPLPPVGIPPSLGGLPLPSHPMSFDA
RMPILDPLRKAGVGGPRAPGPAAPSVYEMAALTQDLDTQVITTKIKEALLANNIGQKLFG
EAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLNDPRNLEKLQLLKNERREASK
RRRALDPTAEVSQDSQDIFQAPSPGGSSKKQRVLFSEEQKEALRLAFALDPYPNLATIEF
LAQELQLSTRTITNWFHNHRMRLKHPSSPGGGSSPNREIQQPPTNHPQGQGQSFDPIHFR
LLLSQRLMELRKEKGLPPTLPGLGPGLPPGLFSHFPHLGQQELGNPRLDSLGGGLDLSMK
GENDYDDASLVDEDSNMSGAMSPSGGGRSEGEDGDRDGRGAPSPLPRTSRRKPAAPQWVN
PSWASGEGGKEREVIINGVCVMQTDDYRLREQETVRIEPTPVDEANRNRSLKEEQEDENE
EEQQPASTHPSSPRPDTLTEPVTLQEEESSTLQEEPTPSQEAVKEETDEVEEEEA
NT seq
4488 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccaggccctgacgcccagggcggcgcagggggcgagaaccctggaaaggac
atggctgccctacacaacttgcagtccatggactggctcttcaagaaggaacgaatcttc
ctgctggcacagttctggcaacagagagcaacgttagcggaaaacgaagtccacacacta
aaggaacagctcgattcgatcaagtgtcagaagggcgtaaaggagagcaacaataacaat
aataacaacaacaacaacatcaatagcacaaactccaaccataatataaacaaaagcaca
aacacagaatccaacaatgacgtagtggactcctcggaagggagcacagagcggacgggg
aggagcacacctgtcgaggatattattcagtccaaagagaaagaggttcgaggagcttca
tcctcaagttcggcatcggctctatcgctaatggaagctgcggaagtgtccaagctcgtg
gaggatatctcccgcctccaagccgcgctctccggcgtcaaggaagccacagctgcccag
atgcacgctatggaagaacagctggaggagaagaacagactcatccagcgcctggaactc
aagcttcaggactccagcctcgacgaagccaagagagatctacagagcatacgagaaggt
cggatggtgcccgaaggcctcagtctaccacccaggtccttggagagtctgctggtggac
aggtcgaagtccgaacacgataagattcccacctcggagttcggtaagcagtttcacgat
gtctatggtcctcttccacccatgagccactcgcacctccacccacctcttcggcctcac
ctaccgccgccgctggcacctccgcccatggcatcccctctccagccgctggccccgcac
cctccgccgggcacgccgctgcaccacctcctgggggaggagtggcggaggtcgctcgaa
aggtccgcgctagatcgccatcacctcaactcaggtcaaatgtcgcccgacagcggcgga
gggcccgtcgagcggtccgactcgagggaatcgcccatcggcgacgtgagcatgaagagc
ccgagctcgatggccaacggcttcccccacgagacgaagagccccttccagcccagggac
gaccggtcacccttcaaggacgagatgccctcgatggccttcaagttcgaggaccggatc
actggagaatcactcattccgaagggagatcccatggaagctaggcttcaggaaattcta
aggttcaacatggagaagttctgtcaacaaagcctggacaccctgtgcctggcccggcga
gtgcgggaactcctctccattcacaacatcggacagcgactcttcgcaaaatatatcctg
gggctctcgcagggcaccgtctcggagctcctgtccaagccaaagagttgggacaaactg
acggagaaaggccgcgactcttaccgcaagatgcacgcttgggccaccgacgacaacgcc
gtctacctcctcaagtctctcatccccaagaaagcgtgccgtaggaaacctgaaacaggc
ctgacgcttaatggtctcctgacaggtacgcacaaggactccagcggagctttccggggc
cccgatgacagcgtgacggaggagagaatccagcatatcctgaccgaggcctcccgcgcc
atgacctcctcgacggccaccagccaggcgggccagcaggaccaggactcccgaagcacg
gactccaagtctcccgccagctccacgcactcccccagtagcccgctgtcccggggagat
tcgcggtcgcgaatccgcaaatacgacaacgacgacatcccgcaagagaaggtggcaaga
atctaccaggaggaacttgtcaagctcatgtcaaggcctcaggagccccaacttccgctc
ccgcgagacccccagtacccggggatcctgttccccttcctgggccagtcgctgctgttc
aacagatcccacgaggaggtgaagctcgccctcgacgcctaccaccaggagctgagcaag
cttcagggaaatgctgccgtcacaggcatgggcctcggcgcggttggcctgggcatgggc
ggcggcggaggcctcggcgtaggcgtcggaggaccatcactaggcatgggcgtgggactc
ggtgcgggcggccttcacaacggcgcccaagacctgacgatgcccaagcgcgagcagcgg
aacggagacgaggaggaggagggacgcaacccgagcgtcacctcccccttcggacccagc
agatccaaggccgaaaccaatctcagctcggccaccacgcctctgagcaaccttgtaact
cccatcacctccatcgcagcgaccagtggggacgacctcagcgtgtcggcgtcgcccctt
cagcgcatggcgtccatcaccaactcgctcatgacggggccgcccatctccaccggctcg
cccctgactcagaagcccctgaaggccgtcctgccgcccatcacgcagcagcagttcgac
cagtacagcaacatgaacacggaagagatcgtcaagaaggtgaaagaacagctgagccag
tacagcatctcgcagcggctgttcggggagtcggttctcgggctgtcccagggctccgtc
tccgacctcctggctagacccaaaccatggcacatgttgacacagaagggccgagaacct
ttcatcaggatgaagatgttccttgaggacgaaaacgccgtgcacaagctcgtggcttcc
cagtacaagatcgcccccgagaagctgatgaggaccggaggatacactgcccctcccctg
tatttagtcggtggttgtccactacccggtgggttagctgccccagggtgtctcccaggg
gggttgtccacttctggctcacctacccttccatcatatacaacagggaccagcaaacca
caccacatgaagcttcctgcagacatcccgaagagcatggagtcgcctcttcctcccgtg
gggatccccccatccctcggcggccttccacttccttcacatcccatgtcctttgacgcc
aggatgccgattctagaccctctgaggaaggctggcgtaggagggccgcgcgcccctgga
ccagcagctccgtcagtgtatgagatggccgccctcacccaagaccttgacacccaggtc
atcaccaccaagatcaaggaggctctcctggcaaacaatattggccaaaagttgtttggc
gaagcagtgctgggcttatcccagggctcagtgtcagagctgctgagcaagcccaagccg
tggcacatgctcagcatcaaggggcgcgaacctttcatccgcatgcaactgtggctcaac
gaccctcgaaaccttgaaaagctgcagctcctgaagaacgagcgacgagaagcgagcaag
cggcggcgcgcgctggacccaacggccgaagtgtcccaggactcccaagacatattccag
gcaccttctcctggcggatcatccaagaagcagcgggttttgttctcggaggagcagaag
gaggccctgcgtctggcctttgcactcgatccctacccaaatttggccaccatcgagttc
ctggcacaagaactccagctctccacacgcacaatcacaaattggttccacaatcaccga
atgcgactcaagcacccgagcagccccggcggaggaagctcgcccaaccgcgaaattcag
cagccaccgacaaaccatccgcagggccaggggcagagtttcgaccccattcacttccgc
ctcctgctctctcagcggctgatggagctgaggaaggagaagggcctgcctccgacgcta
cctggcctcgggcccggcctgcctccgggtctgttctcacacttcccgcacctggggcag
caggagctgggcaacccccgcctggactcgctcggcggtggtcttgacctttccatgaag
ggagaaaatgactacgacgatgcttcacttgttgacgaggattccaacatgtccggtgcc
atgagtccaagtggaggaggccgttctgaaggggaggacggcgatcgcgacggccgagga
gccccctcccccctcccacggacctctcgacggaagcccgctgccccacagtgggtaaat
ccatcgtgggcatcaggtgagggaggtaaggagcgcgaggtaattataaacggcgtgtgc
gtcatgcaaacagatgactatcgtctaagggaacaggaaacagtgcgcattgagccaact
ccagtggatgaggccaaccgcaaccgctctttgaaggaggagcaggaggacgagaacgag
gaggagcagcagccggcctccacacacccatcttccccgcggccagacacattgacagag
ccagtcacattgcaggaggaggagtcctctaccttgcaggaagagccaacgcccagtcaa
gaggctgtcaaggaggagacggacgaggttgaggaggaagaggcgtga
DBGET
integrated database retrieval system
