Penaeus vannamei (Pacific white shrimp): 113805786
Help
Entry
113805786 CDS
T06111
Symbol
ais
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvm03009
]
113805786 (ais)
Enzymes [BR:
pvm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113805786 (ais)
Ribosome biogenesis [BR:
pvm03009
]
Eukaryotic type
90S particles
Helicases
113805786 (ais)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
113805786
NCBI-ProteinID:
XP_027212649
LinkDB
All DBs
Position
24:2172504..2186180
Genome browser
AA seq
607 aa
AA seq
DB search
MNSYDIFRKLTRGMKFDHNRFKGDLKKIGVCKTKDDDQSSVTVNETKEKEEAVDEPESTE
ENSDEDDVEEDEEGQVSMLSDIQIGGSEATGKKEKKKKVISKEKQLRIHQQEVNHQRNKL
GISVWGTDVPDPVETFDDMIVKHKLSEVLVSNLLNQGYSEPTAIQKQAWPLMLQGREILG
CAPTGSGKTAAFLVPILNQLGGPQRKGFRAVILAPTRELAKQTYRECTRLSEGLGLRVHI
ISNVNKAKEKFGPKSAKKFDVLVTTPNRLVFLLQEDDTPPIDLSNVEWLVVDESDRLFEG
GARGFRDQLAAVYRACTGPNIRRALFSATFSHDVQHWCKLNLNNVAMVTVGIRNTACEDV
KQELVFCGNETGKVLALREIFRKGYEPPVLVFVQTKERAKELFKELIYDNIMVDAIHADR
TQLQRDNVVRAFRERKVWVLICTELMARGIDFKGVNLVINYDFPPSAISYIHRVGRTGRA
HHQGRAVTFWTMADKPYLRSIALVMHNSGQHVPEWMLALKKARKNEKKKLSTKHPERGHI
SQGVLYEKLQKRKMKQMKGKSKRLKMMNGEATPKGEEETGDNDMANSADKQTKKKKKKTK
KKVTTGE
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgaattcgtatgatatctttcgaaagctcacgcggggaatgaaatttgatcataacaga
ttcaaaggagatctgaaaaaaataggggtctgtaaaacgaaagatgatgaccaaagcagt
gtgacagtgaatgagaccaaagaaaaagaagaggcagttgacgagccagaatctactgaa
gagaactcagatgaggatgatgttgaagaagatgaggaaggccaagtaagcatgctgtct
gatatccagattggaggatcagaagcaacgggaaagaaagaaaagaaaaagaaagtaatc
agtaaagaaaaacaacttcgaatccaccaacaggaggtcaatcatcaacgaaataagctc
ggcatctcagtgtggggaactgatgttcctgatccggtagaaacttttgatgacatgatt
gtgaagcacaagctaagcgaagtactggtgagcaatcttttgaaccaaggctactcagaa
cccacggcaatccagaagcaggcatggccactcatgctgcaaggacgggaaatcctgggc
tgtgcaccaacaggctcaggcaagacagcagcctttcttgtccccattttgaatcagctt
ggcggccctcagaggaagggtttccgcgctgtgattctggcacctaccagagagttggcc
aaacagacttacagagagtgtacaagactgtctgagggtcttgggttacgtgtgcacatc
attagtaatgtgaacaaagcaaaagaaaagtttgggccaaagtctgcgaaaaaatttgac
gtattggtgacaactccgaatcgtcttgtatttctcctgcaagaggatgacacgcctcca
attgacttgtccaatgtggagtggttggttgttgatgagagcgatcgcctcttcgaaggt
ggagcacgaggattcagggatcagctggctgcagtgtaccgggcatgcactggacccaat
atcagacgtgcgctgttctcggctacgttttctcacgacgttcaacactggtgtaaattg
aatcttaataatgttgccatggttacagtaggcataaggaatacagcctgtgaagacgta
aaacaagagctggtattttgtggaaatgaaactgggaaagtcctggcactgcgtgaaata
ttccgaaagggatacgagcctcctgtgctagtatttgtgcagaccaaagagcgagcgaaa
gaactgtttaaggagctgatttatgacaacataatggtggatgccatccatgcagatcga
acacagctacagcgtgacaatgttgtccgggcattcagagaaagaaaagtctgggttttg
atatgcacagaactcatggcccgcggtattgacttcaagggagtgaaccttgtcatcaac
tatgacttcccaccttcggcaatcagttacattcacagagtaggaaggactggcagagct
catcatcaaggaagagctgttacattctggacaatggcagataagccatatctgcggagc
attgctcttgtaatgcataattctggccaacatgttcctgaatggatgcttgcactgaag
aaggctagaaagaatgagaaaaagaagttatcaactaaacatccagagcgtgggcacata
tctcagggggtcctgtatgagaagctccaaaagaggaagatgaagcaaatgaaaggcaaa
agcaaaagattgaaaatgatgaatggggaagccacaccgaaaggggaagaggaaactggt
gataatgacatggcaaacagcgcagataaacaaaccaaaaagaagaaaaagaagacgaaa
aagaaagtgacaacaggggaataa
DBGET
integrated database retrieval system
