Penaeus vannamei (Pacific white shrimp): 113805923
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Entry
113805923 CDS
T06111
Symbol
Srrm1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03013
Nucleocytoplasmic transport
pvm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113805923 (Srrm1)
03015 mRNA surveillance pathway
113805923 (Srrm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvm03019
]
113805923 (Srrm1)
03041 Spliceosome [BR:
pvm03041
]
113805923 (Srrm1)
Messenger RNA biogenesis [BR:
pvm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
113805923 (Srrm1)
Spliceosome [BR:
pvm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
113805923 (Srrm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
113805923
NCBI-ProteinID:
XP_027212792
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All DBs
Position
17:complement(18491854..18510651)
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AA seq
824 aa
AA seq
DB search
MADAGFFRGTSAEQDNRFSNKDKKLMKEMKFSESLTKKVDMTKVRLEVIKPWVTEKITTI
LGIEDDVVIEYVFNQLEAEKNPDPRKMQIMLTGFLNGKNARIFMGELWDLLISAQASPSG
IPKQFLDQKKEELKKKMEEEERLQKIQEARRERDKEKEKDKERDRDRDKDREKDRRDRRS
RSRDRSSRGSRRDRSRSPRSKDDKKESKKESSRWDKKDESSKNKEEKKETNGDVSAKEKS
AATKSPKQEPSSPKQEATVKQEKPEISPKKERSERDRDRGERGHSRDRKSRRSRGRSPKK
EEDRRRRGSSRKRSPSPRKHSPTVRKRSPSPRKRSASPRKRSPSPRKRSASPRKRSPSIR
KRSVSPHKRSSSPRPKIRRRTRSPSSNSESSSSSRSRSRSAPRNKEDDFEIHRKEDSVLK
KRQYRSNRDPSSSEDEGQARNFTGDHRGAGSPRRRSPPRYKRSPSPPRRGRRSPSPRYRR
RSPSPRRHSPSPRFHRRSPSPRGRRSVSPKGSPRMRRSPSPRGRMSPNMRRGRSPSPRNR
RSPSPRGRRSITPRGRRSSSIRGRRSVSPRGRRSPSPRGRRSSSPRRRPMSPPQSRYRRS
HSRSPVRKKHGSASHSPRRGGPPPPAAADKKHNISNASRLMQLANYSADTIKEVQYKLTK
KNENNHPASGSDESESDDGRMSRRVPKRRSRSASVSQSPRQRRRMDSGSVDGSEEEEEDE
GSSSRESSPVEKKKKKKKKKHKKKDSSSESEGSETEEKKKKKKEKKKKHKKHKKQKKHKK
HRHEESESESGESMGGEELERKLREKALLSMKRQERSSAASESE
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgctggcttctttcgcggcacatctgcagaacaggataaccgctttagtaac
aaagacaagaagttaatgaaagagatgaagttctctgaaagtctgacaaaaaaggtggat
atgactaaagttcgtttagaagtcatcaagccatgggtcacagagaagatcacaactata
ttaggtattgaagatgatgtcgtcattgaatatgtcttcaatcagctagaagcagaaaag
aatccagatcctaggaaaatgcagattatgttgactggtttcctgaatggtaagaatgcc
agaatctttatgggagaactgtgggacctcttgatctcggcccaagcaagtccatcaggt
atacccaaacagtttctagatcagaagaaagaagaactgaaaaagaaaatggaggaagaa
gaaaggctacaaaagatacaagaggcaagaagagaaagagataaggaaaaggaaaaagat
aaagagagggaccgtgatcgtgataaagacagagagaaggatcgcagagacaggaggagt
cgtagcagagacagatcatcacgtggatcgcgaagggacaggtcacgctctcctcgttca
aaggatgacaagaaggaatccaaaaaggagtcttcaaggtgggacaagaaggatgaatca
agtaagaataaagaggagaagaaagaaactaatggcgatgtttcagccaaggaaaagtct
gcagctacaaaatcccccaaacaggagccttcttcacctaagcaagaggctacagtcaaa
caggaaaaaccagagatttctccaaagaaggagcgtagtgagagggacagagacagaggg
gaaagaggacactcaagagacagaaagagtagaagatcaagaggaagatcaccaaagaaa
gaggaagataggaggcgcagaggctcttccagaaagcgttctcctagtcctcgcaaacac
tcaccaactgtgcgcaaacgatcacccagtcctcgcaaacgatcagctagtccacgcaag
agatcgcctagtccgaggaaaaggtcagccagtcctcgcaagagatctcctagtatccgt
aagcgttcggttagtccacacaaaaggtcatcatcacctaggcccaaaatacggaggaga
acacgctctccaagctcaaattcagagtcttccagcagttctcgatcacgcagtcgttct
gctccaagaaacaaagaagatgattttgagatacatcgcaaagaagactccgttctcaaa
aagcgacagtacagatcaaatcgagacccatcaagttcagaagatgagggacaagcccgt
aacttcactggtgaccatagaggagctgggtctccacggcgtagatcacccccacgttat
aagaggtctccctcaccacccaggcgtggaagaagatcaccctctcctagatatcgtcgt
aggtcacccagtcctcgtcgacattcaccaagcccaagatttcataggaggtccccaagt
cctcgtggtaggaggtctgtgagtcctaagggcagcccaagaatgcggagatcgccaagt
cccagaggcagaatgtcaccaaacatgcggagaggcagatcaccaagccctcgcaacaga
aggtcgccaagtcctagaggtcgaaggtccattactccgagagggaggagatcgtccagc
attaggggaagaaggtcagtcagtccaagaggaagacggtcgcctagtccaagagggagg
aggtcatccagtccacgtaggcggcctatgtctcctcctcagagcagatatcgacgatca
cactcacgatcaccagtccgtaagaagcatggcagcgcttcccactctcctcgtaggggt
ggtcctcctcctcctgcagctgcagacaaaaaacacaatataagcaatgctagtcggctg
atgcagcttgccaattactcagcagatacaatcaaggaagtccaatataagctaacaaag
aagaatgagaataatcatcctgcttccggctctgatgaatctgaaagcgacgacggcaga
atgtcccgcagagttcctaagaggagatcgcgttctgcatctgtttctcagtctccacgg
cagaggagaagaatggactcaggatcagtagatggatcagaggaggaagaagaggatgag
ggatcttcaagcagagaatcatcccctgttgaaaagaaaaagaaaaagaagaagaagaag
cacaagaagaaggatagcagtagtgaatctgaggggtctgaaactgaagaaaagaagaag
aaaaagaaggaaaagaagaagaaacacaagaaacataagaagcagaagaagcataaaaaa
cacagacatgaggagtcagagagtgaatcaggagagagcatgggaggggaagagttggaa
cgtaagcttcgagagaaggccctcctttccatgaagcgtcaagagagatcatctgctgct
tcagagtcagagtag
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