Penaeus vannamei (Pacific white shrimp): 113806242
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Entry
113806242 CDS
T06111
Name
(RefSeq) cyclic nucleotide-gated channel beta-1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113806242
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvm03019
]
113806242
Messenger RNA biogenesis [BR:
pvm03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
113806242
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NCBI-GeneID:
113806242
NCBI-ProteinID:
XP_069994251
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Position
24:complement(27620750..27624472)
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AA seq
358 aa
AA seq
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MWPTVGCLLFFCFCFLVCCVFCWSDKCSKKRGKKNQDPNSDKQPALEMTSFSTPDDHVTM
EGPPLPLCPPPGPFPPSYPPYPGVPPPLPPCSCTGPGYVSASPWLSSGAPRETWSQPSLP
SSASRPRPARQIPSSGMAFLSHKDYEEYVDRTSPKKGDGRRRKRDGPWDFVNPVFEEDFP
DLDVIPSDDLVEDYMDKEAQRRQREEEEKAERRRGGREREKEARGERRRPEEESRTRWVE
FHEKKTRFGDEREDERKKTGFRLREKDLSQEEEAEDEEVVVVMSLEEDDYGEDDFYGSRV
EAWSPERRRSAESSSSGGSEGSFGRPGWQRFQGRDRPNFGVRRQFPGGGGAEARRAGP
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgtggccgactgtcggctgcctcctcttcttctgcttctgcttcctcgtctgctgcgtc
ttctgctggagcgacaagtgctccaagaagagggggaagaagaaccaggacccgaactcc
gacaagcagccagcgcttgagatgacgtcattctccaccccggacgatcacgtgaccatg
gagggtccgccgctccccctctgccccccacccggtccctttcccccttcgtacccgccc
taccccggggtgccccctcccctgcccccctgctcatgcaccggcccaggctacgtctcc
gcgagcccctggctaagcagcggcgcccctcgggagacgtggtcccagccctcgctccct
tcctcggcgtcgcgacctcgtcccgcgcggcagatcccctcctccggcatggccttcctc
agccacaaggactacgaggagtacgtggaccggacgtcgcccaagaagggggacggcagg
aggaggaagcgggacggcccttgggacttcgtgaaccccgtcttcgaggaggacttcccg
gacctcgacgtcatcccgagcgacgacttggtggaagactacatggacaaagaggcgcag
aggaggcagcgggaggaggaggagaaggctgagaggaggcgcggaggacgggagagagag
aaggaggcgagaggagagagacgaaggccggaggaggagagcaggacgcgctgggtggaa
ttccacgagaagaagacgaggttcggcgacgagcgcgaggacgagcggaagaaaacggga
ttccgtctccgggagaaggacctgtcgcaggaggaggaggccgaggacgaggaggtggtc
gttgtcatgtcgctggaggaggacgactacggggaggacgacttctacgggtctcgcgtc
gaggcctggtcacccgagaggcggaggagcgccgagagctcgagcagcggcgggagcgag
ggttccttcgggcggcccggctggcagcggttccaggggcgcgaccgacccaacttcggc
gtccggaggcagttcccgggcggcggcggggcggaggcgaggcgggccgggccgtga
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