KEGG   Penaeus vannamei (Pacific white shrimp): 113806625
Entry
113806625         CDS       T06111                                 
Name
(RefSeq) nucleoporin Nup43
  KO
K14305  nuclear pore complex protein Nup43
Organism
pvm  Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:pvm00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    113806625
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pvm03019]
    113806625
   03036 Chromosome and associated proteins [BR:pvm03036]
    113806625
Messenger RNA biogenesis [BR:pvm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     113806625
Chromosome and associated proteins [BR:pvm03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    113806625
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 WDR55 WD40_Prp19 Beta-prop_EIPR1 WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML_2 Beta-prop_EML Beta-prop_RIG_2nd MIOS_WD40 WD_LRWD1 Beta-prop_SCAP Beta-prop_DCAF4 WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_IFT140_1st Beta-prop_SPT8 WD40_RFWD3
Other DBs
NCBI-GeneID: 113806625
NCBI-ProteinID: XP_069987994
LinkDB
Position
17:complement(9015934..9026449)
AA seq 357 aa
MAGSASISSSSVSKKYVSRKVKTVRWKPPSTSDFGDTNTFVTGSWDDCENVVAVWHVPGC
EEDPTLLHQLSHPANVNDIQYVTREAFATAGGNGSVKLFQHSNNDQLESKATWDRIHTVL
GGSVPCTALATNGDQIASVGEDGNLVILNPSQDQPVRNIESVGGCSMYAVVYVRASEVVT
ANMQGHLKLWDLRAQQPAKATLLSPDQIAVCHLAGHPTQQHLVAAGGEDGAMAIWDMRNI
AQPVTLISAHNGPITEVRFHPAAPDHLFTCGLDGQLLHWDASASARPTPVSFKGPRDPAG
ASITVWLSSDVARGAIDTTCIIPQSSLPINSLDIEGPTLVAGSDNESIYTVRNVLLY
NT seq 1074 nt   +upstreamnt  +downstreamnt
atggcggggtcagcttcaatttcctcgtcgagcgtctccaaaaaatatgtctccaggaag
gtcaagacagtgcgatggaaaccccccagcacttcggatttcggcgacaccaacaccttc
gtcactggcagctgggatgattgcgaaaatgttgtagctgtatggcatgtaccaggatgt
gaagaggacccaactctcctacaccagctgtcacaccctgcaaatgtcaatgatattcag
tatgtcacaagagaagcatttgcgactgcaggaggtaatgggagtgttaagctatttcaa
catagcaacaatgaccagttagaaagtaaagcaacttgggatcgcatacacactgttcta
ggaggctcagttccatgtacagcattggccacgaatggtgaccagatagcatctgtcggt
gaagatggcaatttagtaattttaaatcccagtcaagatcaacctgtcagaaacattgag
agcgtgggtggttgtagcatgtatgcagtagtgtatgtccgcgctagtgaggtagttaca
gccaacatgcaaggccaccttaagttatgggatctgcgggcccagcagccagccaaagca
actcttctcagcccagatcagattgcagtatgtcaccttgcaggacacccaactcagcag
caccttgtggcagctggaggagaagacggagctatggccatatgggacatgaggaatata
gctcagcctgtcactctcatttctgcacataatggaccaattactgaagtacgattccac
cctgcagcaccagatcatttgtttacatgtggtttagatggtcaacttttgcattgggat
gcttctgcctctgcacggccaacacctgtgtctttcaagggtcctcgggatcctgcagga
gcaagtatcacagtgtggctaagcagtgatgttgcccgcggagccatcgataccacttgt
ataattccacagtcatccttacccatcaactcactggatattgaagggccaacacttgtt
gctggttcagataacgagtccatttatacagtcagaaatgtgttgctttattaa

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