Penaeus vannamei (Pacific white shrimp): 113806625
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Entry
113806625 CDS
T06111
Name
(RefSeq) nucleoporin Nup43
KO
K14305
nuclear pore complex protein Nup43
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113806625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvm03019
]
113806625
03036 Chromosome and associated proteins [BR:
pvm03036
]
113806625
Messenger RNA biogenesis [BR:
pvm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113806625
Chromosome and associated proteins [BR:
pvm03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
113806625
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WDR55
WD40_Prp19
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_RIG_2nd
MIOS_WD40
WD_LRWD1
Beta-prop_SCAP
Beta-prop_DCAF4
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_SPT8
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
113806625
NCBI-ProteinID:
XP_069987994
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Position
17:complement(9015934..9026449)
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AA seq
357 aa
AA seq
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MAGSASISSSSVSKKYVSRKVKTVRWKPPSTSDFGDTNTFVTGSWDDCENVVAVWHVPGC
EEDPTLLHQLSHPANVNDIQYVTREAFATAGGNGSVKLFQHSNNDQLESKATWDRIHTVL
GGSVPCTALATNGDQIASVGEDGNLVILNPSQDQPVRNIESVGGCSMYAVVYVRASEVVT
ANMQGHLKLWDLRAQQPAKATLLSPDQIAVCHLAGHPTQQHLVAAGGEDGAMAIWDMRNI
AQPVTLISAHNGPITEVRFHPAAPDHLFTCGLDGQLLHWDASASARPTPVSFKGPRDPAG
ASITVWLSSDVARGAIDTTCIIPQSSLPINSLDIEGPTLVAGSDNESIYTVRNVLLY
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggcggggtcagcttcaatttcctcgtcgagcgtctccaaaaaatatgtctccaggaag
gtcaagacagtgcgatggaaaccccccagcacttcggatttcggcgacaccaacaccttc
gtcactggcagctgggatgattgcgaaaatgttgtagctgtatggcatgtaccaggatgt
gaagaggacccaactctcctacaccagctgtcacaccctgcaaatgtcaatgatattcag
tatgtcacaagagaagcatttgcgactgcaggaggtaatgggagtgttaagctatttcaa
catagcaacaatgaccagttagaaagtaaagcaacttgggatcgcatacacactgttcta
ggaggctcagttccatgtacagcattggccacgaatggtgaccagatagcatctgtcggt
gaagatggcaatttagtaattttaaatcccagtcaagatcaacctgtcagaaacattgag
agcgtgggtggttgtagcatgtatgcagtagtgtatgtccgcgctagtgaggtagttaca
gccaacatgcaaggccaccttaagttatgggatctgcgggcccagcagccagccaaagca
actcttctcagcccagatcagattgcagtatgtcaccttgcaggacacccaactcagcag
caccttgtggcagctggaggagaagacggagctatggccatatgggacatgaggaatata
gctcagcctgtcactctcatttctgcacataatggaccaattactgaagtacgattccac
cctgcagcaccagatcatttgtttacatgtggtttagatggtcaacttttgcattgggat
gcttctgcctctgcacggccaacacctgtgtctttcaagggtcctcgggatcctgcagga
gcaagtatcacagtgtggctaagcagtgatgttgcccgcggagccatcgataccacttgt
ataattccacagtcatccttacccatcaactcactggatattgaagggccaacacttgtt
gctggttcagataacgagtccatttatacagtcagaaatgtgttgctttattaa
DBGET
integrated database retrieval system