Penaeus vannamei (Pacific white shrimp): 113806711
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Entry
113806711 CDS
T06111
Name
(RefSeq) nuclear factor related to kappa-B-binding protein isoform X1
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
113806711
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvm03036
]
113806711
Chromosome and associated proteins [BR:
pvm03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
113806711
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NFRKB_winged
ASXH
Motif
Other DBs
NCBI-GeneID:
113806711
NCBI-ProteinID:
XP_069976013
LinkDB
All DBs
Position
Unknown
AA seq
1460 aa
AA seq
DB search
MMETITCAGVTLDLPSEMCQDISLLFEVISPDTWNNHLTDEHREMLMGFLPDFPENDLEE
KTRTLEMFFMDQNFRHGTPLRLFHEQLSKGFFNPEISKMRALHKKILYREYRYRQKQYVH
HTLEEILVRRKRVLDIVSNMPPDDVPKIPRLPPLHNKRKSSRTSIEYRTKKRYFRELAAI
KAELGDASDFSEDEIYPEGPGASLNKKQRRQLGGLEGSLPTDLLPVRATHSSGSLALDLE
LKITPTSNPLDLTDDHFRAMLTAHRLRRNKRESSVDLDTRGITLQDVITRAQVQSKRPPQ
RNVISPLLLEKPKKKIKVKKEISSPQVPSTILADLPVIPKTEIASDSESSSSSSSSSTES
DSEETDIKKEIPAVPQAVKKGITGTKSVKVKLEPAETSTSPEDIDIGGLNVEPLIKEELK
VELKEEPMEDQVTAAIETSSELTAALESIGACIAPELTQETHICFFSLIRDIICSTGEQR
MTRAQLESSIRVWQESAISPLNEWYSNVPSWVNILPSAINFLCGHFADVQPADFVPYIEY
KSMLRVYQWIGAGRDSDGHLEPLAQFWLANKSSMSSEWIEDDMMGSRLDNEESDIIPPPR
CYTSWTVQPATESEKEMYRAQEKLRYEKPHKAYTFRMHSYESVVGPVKGIYTQQTGLNKA
RGHSLLVPDRPAYVTILSLVRDAVARLPNGEGTRSDICELLKESQYLAPLTSPTAENNLN
SVVSGALDRLHYENDPCVKYDAPRKLWIYLHRNRNEEEFERMHHLNGPGGNKNKKPAPRR
QSRAKAKDSLNIKGPPNVSLEPIASPKVEGTQLKLKPEEVAALAKAKADSPVKLDQLGSA
AVGKTVTSVRVGGVRGAMGASSVQTIQVSTAGGVQTIKVALPPGAQTITKVTPQTLAKGP
TSSITKVAGQTISRAANPALAKAVTSGIKGVALQQSVLQSTVAGPTLGQETVLGTQHITN
LSSGNIGQVKPRAPVVTLTTREAARLPAPSVSQARPSASATTTPASQQHTAQSTLASQVS
GVSGGKISNTATVVNMATTAAQKANLISLGGFKLLQATPQQVAGKSSGSNNPVVVNSITK
LQTLMVDGKVLVQGGKVVQAMPGSVGMGGNMGGKQFISGILPGQQVVTVENLLSQGDKTT
QLQGGVVTTVAGNKLAGGNVIQLAGGAGGVQRLTLVSPQGSHLPLNAANQRLVLATSSQA
GKMDGSGNKAQVVQTIQTLQPGTHVVQSSFGAVTTTSTTTTTPTTPTSTSNTTQVITAPI
TSTRMGGSNTQPRFFSVGQQQKTIVQGLNVAGKPSVLASGGIRLVQPGASGTAGTASVVA
GGSTATGNLITIGGKQVLLTSKPFAQQGQLQQVMLTGGNVKAGAQTAQVTSSQGAVVVAS
GTGGQQIVLPASALQGSHLNLKGLQAFQTLKVIPASQVTQQQRGKPVLARIVSPASIRGT
TQTVPSVSTSQSTVHDVSKS
NT seq
4383 nt
NT seq
+upstream
nt +downstream
nt
atgatggagacaattacttgtgcgggggtgacattggatctcccttccgagatgtgtcaa
gacatttcgctgctgtttgaggtgatatctcctgatacgtggaacaaccacctcacagat
gagcaccgggaaatgctcatgggcttcttgcctgatttccctgaaaatgacctggaggag
aagacacgtaccttggaaatgttcttcatggatcagaactttaggcatggtaccccgctg
cgattattccatgaacaactatcaaagggcttcttcaacccagagatctcaaagatgagg
gctctgcataagaaaattctttatagggaatacaggtaccgccagaagcagtatgtccac
cacaccttagaggaaatcttagtgcgcagaaaaagagtgctggacatagtgagcaacatg
cctccagatgacgtgccaaagatccctcgcctgcctcctttgcataacaagagaaaaagc
tcccgaacatcaatagaatacaggacaaaaaaacgctattttcgtgagttagcagccatc
aaagcagaacttggtgatgcaagtgacttttcagaagatgaaatttatccagaaggacca
ggagcttccttgaataaaaagcaacgtcgtcagctaggaggcctggaaggttcacttcct
acagatttgttgcctgtccgggccactcatagtagtggctccttggcactggatttagag
ctaaagataactccaactagcaatccattggacttaacagatgaccattttagggcaatg
ctgactgcccacagactgcgtcggaataagagagagtcatctgtcgatttagacacaagg
ggcataacactccaggatgtcattacaagagctcaggtgcagagcaagagacccccacag
agaaacgtcatttcacctctgttgcttgagaaaccaaagaagaagattaaggtgaagaaa
gaaatctcctccccgcaagttccctccacaatcctggctgacctccctgtcatccccaag
acagagattgcaagcgactcagagtcatcctcctcttcctcctcctcatccacagagagt
gattcagaggagacagatataaagaaggagattcctgcagttcctcaggctgtgaagaaa
ggaataacaggaacaaaaagtgtcaaggtaaagttagagcctgctgagacttccacatcc
ccagaagacattgacattggagggcttaatgtggagcctttgatcaaggaagaactcaag
gtcgaactgaaggaagaaccaatggaagaccaagtaacggctgccatagagacctcttca
gaactaacagcggcactggaaagcattggggcatgcattgcaccagagttaacccaagag
acacatatctgcttcttcagtctcataagggatataatatgttccactggcgaacagcga
atgactcgagcacagctggaatctagcataagagtctggcaggagtcagccatttcacct
cttaatgaatggtactcaaatgtaccatcttgggtcaacatcctgccatcagcgataaac
ttcctatgtggacattttgcagatgtacaaccagcagattttgtaccttatattgagtac
aagagcatgttgagagtgtaccagtggattggtgctggacgagacagtgatggccacttg
gaacccctcgcacagttctggcttgcaaataagtcgtccatgagcagtgagtggatagag
gatgacatgatgggttcacgattagataatgaagagagtgatatcattcctccaccacgc
tgttacacatcgtggacagttcagcctgcaacagagtcagagaaggagatgtaccgtgca
caggaaaaactgagatatgagaagccacataaagcatacacattcaggatgcatagctat
gagagtgtggtaggaccagtgaaagggatttacacacagcagacgggactcaacaaggct
aggggtcactcactccttgtgcctgataggcctgcttatgttaccattctatctctggtt
cgagatgctgttgctcgcttgccaaatggagaaggaactagatccgatatctgtgaactg
ttgaaagaatctcagtacttggctcctctgacaagcccaacagctgaaaacaacttaaac
agtgtggtgtcaggtgcactagacagactacactatgaaaatgatccatgtgtgaaatac
gatgccccaagaaagttgtggatatatttgcacagaaacagaaatgaggaagaatttgag
cgaatgcatcacctaaatggccctggagggaacaaaaacaaaaagcctgctcctcgacgg
cagagtagagccaaagccaaagactctttgaatatcaagggccctccaaatgtttctctg
gagcccattgcttccccaaaggttgagggaactcagctaaaattgaagcctgaggaagtt
gctgctcttgccaaggcaaaggcagacagtccagtcaaattagatcagttgggctctgcg
gcagttgggaagaccgtcacttctgtgagagttggaggtgtccgaggagccatgggtgca
agtagtgtgcagaccatacaggtgtcaacagcaggtggtgtacagactattaaggtagcc
cttccccctggggcacagaccatcaccaaagtcacaccacagacactggccaaaggacca
acttcttccattacaaaagtggcaggacagaccatcagcagagcagccaatccagcactt
gcaaaggcagttacaagtggcatcaaaggtgttgctttgcaacagtcagttcttcagtct
actgtggctggcccaacacttggtcaagagacagtattgggcacacaacatatcacaaat
ttgtcatcggggaacattggccaggtaaaacctcgagcacctgttgttactctgactacc
agggaagctgcaagactgccagctccctctgtatcccaagccagacccagtgcctctgct
acaaccacaccagccagtcagcagcacactgctcagtctactctggcatcacaggttagt
ggtgtctcaggaggaaagatatccaacacggcaactgtggtgaatatggccaccacagca
gcacagaaggctaatctcatctcccttggcggtttcaagttacttcaggctactccacaa
caagtagcaggaaagagtagtggatcaaataatccagtggttgtgaattccataacaaag
ctgcagacactcatggtagatggcaaagtgttggtacaaggagggaaggtggtacaggcc
atgccgggtagcgtagggatgggaggcaacatgggagggaagcagtttatctcaggtatt
cttcctggacagcaggtggtcaccgtagagaaccttctcagccagggtgacaagacaaca
cagctccaaggtggggttgtgacaacggtagcaggaaacaagctagccggaggaaatgtt
atccagctggcaggaggtgcaggtggtgtccagaggctgaccttagtgtctccacagggg
tcacaccttcctctcaatgcagccaaccagagacttgttttggctactagttcacaggca
gggaagatggatgggtctggcaataaggctcaggtggtccagaccatccagaccttacag
cctggcactcatgtggtgcaaagcagctttggggctgtcacaactacaagcaccaccaca
accacacccaccacacccaccagcaccagcaacaccacgcaagtcatcactgcacccata
acctccacgcgcatgggaggctctaacacccaacctcgattcttctccgttggtcagcag
cagaaaactattgttcagggtctgaatgtggccggtaaaccatcagtccttgccagtggt
ggaatccgcttagttcaacctggcgccagtggcacagctggaacagcctccgttgtagcc
ggtggatccacagcaactgggaacctcattacaataggtggcaagcaagtgctgctcaca
tccaaaccttttgctcaacaaggacagctgcagcaggtaatgctgactggaggaaatgtc
aaagcgggagcacagactgctcaggtgacaagcagtcagggtgcagttgttgtagcaagt
ggaacaggagggcagcagattgttcttcctgcatctgccttacagggatcacacctaaat
ctgaagggtttgcaagcgttccagactttaaaagttattccagcatcacaagttactcag
cagcaaagaggaaagcctgtgctagcaagaatagtgtctccagcatcaatacgaggtaca
actcaaacagttccatcagtttccacaagtcagtctacagtccatgatgtatcgaagtct
tag
DBGET
integrated database retrieval system
