Penaeus vannamei (Pacific white shrimp): 113806959
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Entry
113806959 CDS
T06111
Symbol
SK
Name
(RefSeq) small conductance calcium-activated potassium channel protein isoform X1
KO
K04944
potassium intermediate/small conductance calcium-activated channel subfamily N member 3
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pvm04040
]
113806959 (SK)
Ion channels [BR:
pvm04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
113806959 (SK)
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GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
Ion_trans
Med21
Phage_GPO
Motif
Other DBs
NCBI-GeneID:
113806959
NCBI-ProteinID:
XP_069998467
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Position
29:18215929..19126052
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AA seq
779 aa
AA seq
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MATPQSRVSHAPSTENLLAPPTAETPLCAMPRPLITMGESADSGDSVTASLFPSSAAVVG
QRCPPEGQHDAGATRSVPDIELHAREVSTRPEYRGYRLLAPQVRCSCSHLPRAPSRESVR
SVQGGSEVVVVAPTSYRDRIIRQHSQPETCLHCHHPKPSASLRHLPRLDSCSATTHAAEG
IATIAADTLRINGALSSFKQLRKPVSTLSIPGSMKGGTGGGGGRGGEGEDPAIALVGVRS
EYPRYTEEKTGGGSGKTASFRLRNKPNVGYRLGRRKALFEKRKRISDYALVMGMVGIIVM
VVENELSSAQVYTKASSASHALKTLISVSTVILLGLICAYHALEVQLFMIDNCADDWRIA
MTWQRIARIVMELLICAVHPIPGEYSFFWTTKLSNQGGVVDSQWVPIDITLSLPMFLRLY
LICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLMTICPGTVLLVFMVSLWIIASW
TLRQCERYHDEEHANLLNAMWLIAITFLSVGYGDIVPNTYCGRGIAVTTGIMGAGCTALL
VAVVSRKMELTRAEKHVHNFMMDTQLTKRLKNSAANVLRETWLIYKHTKLVKKVNHGRVR
THQRKFLLAIYALRKVKMDQRKLMDNANTITDMAKTQNTVYELVSDMNGRQDVLDERVTT
MEDKLTQIQESLDSLPDVLARCLQKHQELLDQRRVAAPSSNSLHPDMAARPGGYPALTGG
QSPRGSPVWQQQQQQPQQPQGNAPPIFPRASLSPTLQSGERSPPAPASLSGQSLPKSEA
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgccccagagccgagtgtctcacgccccaagcaccgagaacctgctggctccg
cccacggccgagacgcccctctgcgccatgccccgcccactgatcacgatgggcgagagc
gccgacagcggcgacagcgtgacggcgtcgctcttcccctccagcgccgccgtcgttggc
cagcgctgcccccccgaagggcagcacgacgcgggcgccacgcgctccgtccccgacatc
gagctgcacgcccgcgaggtgagcacgcggcccgagtaccgcgggtaccgcctgctggcg
ccgcaggtgcggtgctcgtgctcgcacctgccgcgggctccgtcccgcgagagcgtgcgc
tccgtgcagggcggcagcgaggtggtggtggtggcgcccacctcgtaccgcgaccgcatc
atccgccagcactcgcagcccgagacctgcctgcactgccaccacccgaagccctccgcc
tcgctgcgccacctgccgcgcctcgactcctgctccgccaccacgcacgccgccgagggc
atcgccaccatcgccgccgacacgctgcgcatcaacggcgcgctcagctcgttcaaacag
ctacgcaagccggtgtccaccctgtccatccctggctcgatgaaaggcggcacgggcggg
ggtggcgggcgtggaggcgagggcgaggacccggccatagcactagtgggcgtgcgttcg
gagtacccacgatacacggaggagaaaaccggcggaggctcggggaagacagcctccttc
aggctcagaaacaagcccaacgtcggctaccgattggggcggcgcaaagccctcttcgag
aagcggaagcggatatccgactacgccctcgtcatggggatggtcgggatcatcgtcatg
gtcgtcgagaatgagctctcctctgcccaagtctatactaaggcttcatccgcctcccac
gccctcaagaccttgatcagtgtgtcaacggtcatcctcctagggctcatatgtgcctat
cacgcgctcgaggtccagttattcatgattgacaactgcgccgacgactggcgcatcgca
atgacgtggcaaaggatagcgcggatagtgatggagctcctgatctgcgcagtccatcct
atcccgggcgaatattccttcttctggaccacgaaactctccaaccagggcggggtggtc
gactcccagtgggttccgatcgacatcacgctctccctgccaatgttcctgcggctctac
cttatatgtcgagtcatgttgctacactctaagctcttcaccgacgcttcctcgagaagt
attggcgctctcaaccgcatcaacttcaacacgcggtttgtcctcaaaacgctaatgacc
atctgtccaggcactgtgttgttggtgttcatggtttcactctggatcattgcgtcatgg
actctccgccagtgtgagaggtaccatgatgaagaacatgccaatttgttgaacgccatg
tggcttatagcgatcacattcctttccgtggggtacggtgatatagtcccaaatacatac
tgtgggaggggtattgcggtgactactggaataatgggggccggatgcactgcgttattg
gtcgctgtcgtctcacgtaaaatggagcttaccagagctgagaagcatgttcacaatttt
atgatggacacacagttaacaaagaggttaaaaaattcggcggctaacgtcctgcgcgag
acgtggctaatatacaaacacaccaaacttgtcaaaaaggttaaccacggtcgggtcagg
acgcaccagcggaagttcctattggccatttacgcgctacggaaggtcaaaatggaccag
cggaaattaatggacaacgccaacaccatcactgatatggcaaagacgcagaacaccgtg
tacgagctggtgtccgacatgaacgggcgccaggacgtcctggacgagcgcgtgacgacg
atggaggacaagctaacgcagatccaggagtcgctggactcgctccccgacgtcctggct
cggtgcctgcagaagcaccaggagctccttgatcaaaggcgagtcgccgccccctcctcc
aactccctccaccctgacatggcggcccggccggggggctacccggcgctcacgggcggc
cagtccccgcggggctcgcccgtgtggcagcagcagcaacagcagccgcagcagccgcaa
ggaaacgcacctcccatattcccccgggccagcctgagcccgaccttgcagtcaggggag
cggtcgccccccgcgccggcgtcgctcagcgggcagtcgctgcccaagtcggaggcgtga
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