Penaeus vannamei (Pacific white shrimp): 113807060
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Entry
113807060 CDS
T06111
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvm03000
]
113807060
03036 Chromosome and associated proteins [BR:
pvm03036
]
113807060
Transcription factors [BR:
pvm03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
113807060
Chromosome and associated proteins [BR:
pvm03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
113807060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ADD_ATRX
DNMT3_ADD_GATA1-like
HTH_Tnp_Tc5
Motif
Other DBs
NCBI-GeneID:
113807060
NCBI-ProteinID:
XP_069981689
LinkDB
All DBs
Position
9:32625632..32677507
Genome browser
AA seq
2658 aa
AA seq
DB search
MESFMRMEHDPDGNSQQVAVIMTGQVYREAGLKHSEHPKVEGMLYDKLCQIGKHKLRDDV
RKMALNIALMVSDKEFKPTVAWLDNFMRRFCLSRKKMGFHSSAMLKRKDNVQPQPQTPAS
GSGLTQEDVFNVLGINMDGNGLPEEEGKVAASEKILEDVIAETENGVNGNQGIETDCQTS
LLDSVDKNCSIEDLFASDSENVESKITSLDQNVTPDPKKEQVVCEEIEQLNKLENLASQM
VQNQDSDDDIIIEKSVLKTDTLPKESKMDIDKETIKKEQDSSNDEENNDKDSSKGSDSVC
TIYSDCDTFKCMMETSPFVVEFIDKDNMRGKKSTKGRGKSNGSSDGDSQQDDQADAGGKK
SRQVEDEMTIKYTKEENEYYRKNINDLQKKLHDAVMRCTACNEQINHQIRSLVYTHPVLG
VLSCKRCRKYYGKGRFCKDEEGYDEYCRLCAEGGDLLCCEQEGCFNGFCKRCIKRTMGRS
ELKNAETAENWACYVCDKTSMTELRALHRAILSNLEESEVQDDNLSRKELNKKNLLSKFE
LLKKNRKERATKNSPKKVEKKADKDKSGDSRGKQNQAWLNESIETMVDMLSLCLKNVEKI
NSSWKNSHYSAEGTEKAGKRILKQLTGMMTNFEILEKNVSVEVKKLASEEKVEEIDSTEN
KSKKSKKEAEESTTASSPKKKSSLREMDMETEEQVTPKRKRNKSKIDEDAEEGNRTSCKK
TASQDSLKTSSKDEMEVDDASKDSSKANIRSEDECSANIDDPVEQDEVRSNGSDTAIEES
RGKGDSEPDDEAEIEKALAKTKSLSEGEAEEADKDSSILSSTTVEYVGKESTEKCKKKSR
ASLSKKKDGEESADTSEEQKNPLSNARKTRRSKSTEELSEVNIKKEPDSDSEKEVKSKRG
RKAKDQKKEERDEADEKGSFKKDESEEEKKVIKKEKGDEDSEDYDDEADNKENKSKGRKK
VQKEEKQKKEKKKVISDEEEENDSEKIPKGKKQKRGRKPKEEESDEETKKKSKAKGRGNR
ESEDGDSKEKKKTPRRRTKKRRQEDNDEDDMLGIGDMSSNNESSEEEDTDTEMRRRREEY
EDHSVKKKKKKMMKKDTKKEKGSEDITDSNDEKKTRKSPVKSKGKKKQEEVNGKESSDEE
EANDKEAGESKKGRISPKKSDEQEKKKKKKENNEAFSELLASESENEKGNLSDEKETGAN
DEPMECSQGESSEEGTSEKRKRQAGKSKGEAGGEVMSTSKEEKQKNKKKGSTPIKDDNQM
AMASLLESESDYELEDKPKPKCKKKNFLKKYAEKMEKVKHLTEEEKEELKEKQLESKCQT
KVQKISTEVKSKLEKDEFIDVKEFPEFRRKKETERQKQAKHYDGEADEEDSDEEFEKLMK
FDVNKKFNKPGPKSKKKYPESEPEDEEADVKAKPECNKEEKDDKSKVKKEGVTKKKKEGL
LDISIDKEEEEEEEEEEEEPEEGKKKKGKDGGISLNEKMKKQILMSSDEEAEEEEEEEEE
KDDAEEDEKRRKKYEEKKKKKKAEEKEEDEEEDKEEENKEEEESGKKGAPKVYKKGYMNL
NISSDDGEVGEQDDEHVPDSEEEEEEEEEEDDDDEEDDSDFEESPRKRRTFQISSSDSDD
DKKKKRKKKVTSSENESEELEEAPKPKRKRIRKMSSSSDEGDGDEENKEDSPSKHRKIRR
VIRDEDLMETTKNATQEEEERRKRITERQKKYNQIFEIDVESDQKDLGKLVLDFDPDTKK
ELVSVDEKLVKFLKPHQFKGIKFMWDATCESIEMLSSKRGSGCILAHCMGLGKTLQVITF
THTLLSSKKVNRHIQRVMVCCPVNTVYNWVNEYKNWLRGKLLHFEVSELVSAKDLWSRAY
RLDDWWKEGGVCIMGYDMFRNLSNSKSKRYKGKMKEIFHKTLVDPGPDLIVCDEGHILKN
EKTALSVAINKIRTHRRIILTGTPLQNNLKEYHCMIQFVKPNLLGTKKEFMNRFVNPIEQ
GQCADAMPRDVRRMKRRAHILHNMLEGCVQRFDYTVLKPFLPPKFEYVISIQLSDLQQKL
YQYYLDNLAQGGPKRQGSGLFVDFGALSRVWTHPKVLELAVRRAIFQDDDDELADFICDD
TTEEESSEDERAKKKKKKKKKKNEEDEDSVEEEEVNKDEVEKPGPIPGLTESGKVRVDWW
KKLVEEYNEDSKDEDFLDSLEHGGKLILLLDILRECCSIGDKVLVFSQSLLALDMMEDFL
ELIDRGELEMPSTEDPLPLPFKQWKRDRDYLRLDGSTSPDARKNLCKAFNSTSNERCRLF
LISTRAGGLGINLVAANRVVIFDSSWNPSHDTQSIFRVYRFGQKKPCYIYRFVAQGTMEE
KIYSRQVTKMSTALRVVDEHQIKRYFKMEELAQLYEFTPADRNVRETPIVPEDRLLAELL
KRQKDWIVNYHEHDSLLENQTSEELTEEERKAAWEDYENEKKGFMYYQQQRNSVMPVVGP
ATMVASSAAPSLSLSSFSFEGVVNTIKAQNPNLTQNELCESVVLATKQIQKIHLTHYQRV
QGMVYNLKNPMIAPEQRKLLPFGNHPEMLPMLEQQLRMLEENIQRENQVINHMGQITSQR
VSSSNTANMMSAGLIRGQPVSSGINSATANYVTRPTATPSTSMMMQQQQQMQQQQQLQQQ
TQNQPEKNPTSNDVIMLD
NT seq
7977 nt
NT seq
+upstream
nt +downstream
nt
atggagtcttttatgagaatggagcacgaccctgatggaaattcccagcaggtagctgtc
atcatgacaggccaggtatacagggaggctggcctgaagcacagtgagcatcccaaagtg
gaagggatgctttatgataaactatgtcagattggaaagcacaagctcagggatgatgtt
cgtaagatggccttgaacattgcattgatggtctctgacaaggaattcaagccaacagtt
gcatggcttgataacttcatgcgacggttttgcttgtcaagaaaaaaaatgggattccat
agctcagcaatgttgaaaaggaaagataacgtccagccacagcctcagactccagccagt
ggaagtggcttgactcaagaagatgtttttaatgttttggggataaacatggatgggaat
ggactccctgaagaggaaggcaaagtggcagccagtgagaagatcttagaagatgtaatt
gctgagacagagaatggagtcaatggaaaccaaggcatagaaactgattgccagacaagt
cttttggattcagttgataaaaattgttccatagaagatctctttgcatcagattcagaa
aatgtagagagcaaaatcacatcactagaccagaatgttactcctgatccaaagaaagag
caagttgtatgtgaagaaatagaacagcttaataagttggaaaaccttgcaagtcagatg
gtgcaaaaccaagattcggatgatgacattataatagaaaaaagtgtattgaaaacagat
acacttccaaaagaatccaagatggatatagacaaagaaaccataaaaaaggagcaggat
tcttcaaatgatgaagaaaacaatgacaaggattcttcaaaaggaagtgatagtgtttgc
acaatttacagtgactgtgacacatttaaatgcatgatggaaacctctccttttgtggtg
gaatttatagataaagacaacatgagaggaaagaaatccacaaaaggaagaggcaagagt
aatggttcatcagatggagactctcagcaggatgaccaggctgatgctggagggaagaag
tccaggcaagtggaggatgagatgacaatcaagtataccaaagaggagaatgaatattac
cgaaagaacattaatgatcttcaaaagaagcttcatgatgcggtgatgagatgcactgcc
tgtaatgaacaaatcaatcatcagattcgatctttggtctacacccaccccgtgctagga
gttctttcatgcaagagatgtaggaaatattatgggaaaggtagattttgtaaagatgaa
gagggctatgatgagtactgcagattgtgcgcagaaggaggcgacttactgtgctgtgag
caggagggttgtttcaatggattttgtaagcgctgtataaagcgaaccatgggtcgttct
gagctgaagaatgcagaaacagcagagaactgggcatgctatgtttgtgacaagacttct
atgacagagctccgagcactacacagagctattctgagtaacttagaggaatcagaagtg
caggatgacaatctgtcaaggaaggaattgaataaaaagaacttactttcaaaatttgag
cttctgaaaaagaataggaaggaaagagcaacaaagaattctcccaagaaagtcgaaaag
aaagcagataaggacaaatctggtgatagcagaggaaagcaaaaccaagcttggctaaac
gagagcattgaaactatggttgatatgctttcgttatgtttaaagaatgttgaaaaaata
aacagctcttggaagaactcccattattcagcagagggaactgaaaaggcaggtaaaaga
attttgaagcaactcacagggatgatgaccaattttgaaatccttgaaaaaaatgtttca
gttgaagtaaaaaaactggcttcagaagaaaaggtggaagagattgattccactgagaac
aaaagcaaaaagagcaaaaaggaagctgaggaaagtaccacagcatcttcacccaaaaag
aaaagcagcttgagagaaatggacatggaaactgaggaacaagttacacccaaaagaaag
aggaataagtcaaagattgatgaagatgcagaggaaggaaataggaccagctgtaaaaag
actgcaagtcaagattctttgaaaacatcaagcaaagatgaaatggaagtagatgacgca
agcaaagattcaagcaaggccaatatcagatcagaggatgaatgttcagccaatatagat
gaccctgtggaacaggatgaagtgaggagtaatgggagtgatactgcaatagaagaaagt
agaggcaaaggtgactctgaacctgacgatgaggccgagatagaaaaggcattagccaag
acaaaatcattgtctgagggtgaagctgaagaggcagataaagattcaagtatcctttcc
tctaccacagttgaatatgttggaaaagaaagtacagaaaaatgcaaaaaaaaatcaagg
gcaagtttgtcaaagaagaaggatggtgaagaaagtgctgatacatcagaagaacaaaaa
aaccctctttcaaatgcaaggaagaccaggagaagcaaaagtacagaggaactgagtgag
gtgaacataaagaaggaacctgactcagacagtgaaaaagaagtgaaaagtaaaagagga
aggaaggccaaagatcagaaaaaggaagagagagatgaggcagatgagaaaggctcgttc
aaaaaggatgaatctgaagaagaaaaaaaagtgattaagaaagagaagggagatgaagat
agtgaggattatgatgatgaggcagataacaaagaaaataaatcaaagggaagaaaaaag
gttcagaaggaggagaagcagaagaaagagaaaaagaaagtgattagtgatgaggaagag
gaaaatgactctgagaaaataccaaaaggcaagaaacagaaaagaggaagaaaacccaaa
gaggaggagagtgatgaggagactaaaaagaagagtaaagcaaagggaagaggaaacaga
gagtcagaagatggagattcaaaggaaaagaagaaaactccgagaagaagaacaaagaag
agacggcaggaagacaacgatgaggatgacatgttgggtattggagatatgtcatccaat
aatgagtcatcagaagaggaagatacagatacagagatgaggaggcggagagaagagtat
gaagatcatagtgtgaagaaaaagaagaaaaagatgatgaagaaggatactaagaaggag
aagggatctgaagatataacagacagtaatgatgagaagaaaaccagaaaaagtccagtg
aaaagtaagggaaagaagaaacaggaagaggtgaatgggaaagaaagttcagatgaagag
gaagcaaatgataaagaagcaggtgagagtaagaaaggtagaattagtcctaagaagtct
gatgaacaagaaaagaagaagaagaaaaaggagaacaatgaggctttctcagagttgtta
gcaagtgaatctgaaaatgagaaaggcaacttaagtgatgagaaggaaaccggagcaaat
gatgaacccatggaatgcagtcaaggagaaagttcagaagagggtacctcggaaaagagg
aaacggcaagcaggtaagagcaagggtgaagctggtggcgaggttatgagcaccagtaaa
gaagaaaaacagaaaaataaaaaaaaaggcagtacacctattaaggatgacaaccaaatg
gccatggcttctctcctggaaagtgagagtgattatgaactagaggacaaacccaagcct
aagtgtaagaaaaagaatttcctcaagaaatatgcagagaaaatggaaaaagtgaagcac
ttaacagaagaagagaaagaagaactaaaggagaagcagcttgaaagcaagtgccagacc
aaagtgcagaaaatcagcacagaagtcaagagcaaattggagaaagatgaattcattgac
gttaaagaattcccagagttcaggcggaagaaggagacagagcgccagaaacaagcaaag
cattatgatggtgaagctgatgaagaagattcagatgaggaatttgaaaagctcatgaaa
tttgatgtcaataaaaagttcaataaacctggacccaaaagcaagaagaaatatccggaa
tcagagccagaagatgaagaagcagatgtgaaagcaaagcctgagtgtaacaaggaagaa
aaagatgacaaaagcaaggtgaagaaagagggggtaaccaagaagaaaaaggagggctta
cttgacatcagcattgacaaagaggaggaggaggaagaggaggaagaagaggaggagcca
gaggagggaaagaaaaagaaggggaaggatggtgggataagtctcaatgagaagatgaag
aagcagatcctcatgagtagtgacgaggaagcagaagaggaggaggaggaggaagaagaa
aaagacgatgcagaagaggatgaaaagagaagaaagaaatatgaagagaaaaagaagaag
aaaaaggcagaagaaaaagaggaagatgaggaggaggacaaagaagaagaaaacaaagag
gaggaggaatcagggaagaagggtgctccaaaggtttacaagaagggttacatgaactta
aacatctcttctgatgatggagaagttggcgaacaagatgatgaacatgtaccagatagt
gaggaggaggaggaggaagaggaagaagaggatgatgatgatgaagaggatgatagcgac
tttgaagaatcaccaaggaagagaagaacattccagatatcctcatcagacagcgatgat
gacaagaagaagaagagaaagaagaaggtaacttcatcagagaatgaaagtgaggaactt
gaagaagcaccaaagccaaaaagaaaaaggataagaaaaatgtcatcatcatctgatgaa
ggagacggtgatgaagaaaataaggaggattccccaagtaaacaccgcaaaatccgccgt
gtaataagggatgaagacctaatggagaccactaaaaatgccacacaagaggaagaggaa
cgaagaaagcgtattacagaaagacagaaaaagtacaatcaaatatttgagatcgatgtt
gaatcagatcaaaaggaccttgggaaattggttcttgattttgaccctgacaccaagaag
gagcttgtttctgtagatgaaaagttggtcaagttcttaaaacctcatcagttcaaaggt
atcaaatttatgtgggatgcaacctgtgagagcatagaaatgttaagcagtaaaagaggc
agtggctgtatccttgcacattgcatgggtctcggaaagactttgcaggtgatcacattc
acacacacgttattgtccagcaagaaagttaaccgtcacatacagcgagtgatggtctgc
tgccctgtgaacacagtctacaattgggttaatgagtacaaaaactggctcagaggcaaa
ttgttgcacttcgaagtatcagaacttgtatcggcaaaggatttgtggagtcgtgcttac
agactggatgactggtggaaggaaggtggagtctgcatcatgggttatgacatgttccga
aacctctccaacagcaaaagcaagaggtataagggcaagatgaaagaaatcttccacaag
accttggtagatccaggacctgacttaatagtgtgtgatgaaggccacatattgaagaat
gaaaaaacagcattatcagtcgctatcaataaaattagaactcatcggcgcattattttg
actggaacacctctccagaacaaccttaaggaataccattgcatgatacagtttgtcaag
ccaaatctcttgggaactaaaaaggaattcatgaatagatttgtaaatcctattgaacaa
gggcagtgtgctgacgccatgcccagagatgtaaggaggatgaagagaagagctcacatt
ctacataacatgttggagggatgtgtacagaggtttgactacacagtgcttaaacctttc
ctgcctccgaagtttgagtatgttatatcaatacaactgtcagacttacaacagaaactc
tatcagtattacttggacaatcttgcccaaggtgggcccaagagacaaggatcagggctc
tttgtggactttggtgctctgtcaagagtttggactcaccctaaagtccttgagttggct
gtgagaagagcaatcttccaagatgatgatgatgagttggctgatttcatttgtgatgat
acaactgaagaagaatcctctgaagatgaaagagccaaaaagaaaaagaagaagaagaag
aaaaagaatgaggaagatgaagattctgttgaagaggaagaggttaacaaagatgaggtt
gagaaacctggccccatcccaggcttgacagagagtgggaaggttcgtgtagactggtgg
aagaaattagtggaagaatataatgaggattctaaggatgaggactttctggattcctta
gagcatggtggaaagctgatccttctcctagatattttgcgtgaatgttgttccattggt
gacaaagtgcttgtgttcagccagtcccttttggccttagacatgatggaggacttctta
gaattgattgacagaggagagttggagatgccctcaacagaagatcccctacctttaccc
tttaagcagtggaagagggacagggattaccttcgtttagatggctcaacaagtcctgat
gccaggaagaacctctgtaaagcatttaacagtacatcaaatgaaaggtgtcgtttgttc
ctcatatcaactcgtgcaggaggcttgggcattaacctggtagctgcaaacagagttgta
atattcgactcttcttggaatccttcacatgacactcaatccatcttcagagtgtatcgt
tttggacagaaaaagccttgctacatctatcgctttgttgcacagggaacaatggaagag
aaaatctattctcgtcaagtaacaaaaatgtcaacagcattgagagtggtagatgaacac
caaatcaaaaggtacttcaaaatggaagaactagcacagctgtatgagtttactccagca
gataggaatgtcagagaaaccccaattgttccagaggatcgattgttggcggagttactg
aagcggcagaaagattggattgtaaattaccatgagcatgattccctccttgaaaaccag
acaagtgaagagctgactgaagaggaacgcaaggcggcttgggaggattatgaaaatgaa
aagaagggatttatgtattatcaacaacaacggaacagtgttatgcctgtggttggtcct
gccaccatggttgcatcatcagctgccccgtcattgtcactttcatccttcagctttgaa
ggggtggttaatacaatcaaggcacagaatcctaacctaacgcaaaatgaattgtgtgag
agtgttgtactggctacaaaacagatccaaaagattcatcttacacattatcagagagtc
caaggaatggtgtataatctcaagaatccaatgatagctccagagcagcgaaagttgcta
ccatttggaaatcatccagaaatgttgcccatgctggaacaacagttacgcatgctagag
gagaacattcagcgtgagaaccaagtaatcaatcacatgggacagatcacttcacagaga
gtgagttcttctaatacggccaatatgatgtcagctggactgatacgtggtcagccagtt
agctcaggcataaattcagctactgctaattatgttacaagacccactgcaactccttcc
acatcaatgatgatgcagcagcaacaacaaatgcagcagcaacaacagctgcaacaacaa
acacaaaatcaacccgaaaagaatcctacatcaaatgatgtgatcatgcttgactga
DBGET
integrated database retrieval system
