Penaeus vannamei (Pacific white shrimp): 113807135
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Entry
113807135 CDS
T06111
Name
(RefSeq) serine/arginine-rich splicing factor 5 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113807135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvm03041
]
113807135
Spliceosome [BR:
pvm03041
]
Common components
Common spliceosomal components
SR proteins
113807135
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
SET_assoc
SPOR
Motif
Other DBs
NCBI-GeneID:
113807135
NCBI-ProteinID:
XP_069977931
LinkDB
All DBs
Position
5:complement(8356246..8373440)
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AA seq
382 aa
AA seq
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MARVYVGGLHYNCRERDLERFFKRYGRLRDCLIKNGYGFVEFEDERDADDAVYEMNGREL
LGERVTVEHARGLPRRGGYGFGGGGGGRDRDRDRRPAWLDRASWSKPSDLHRRYGPPTRT
PYRVIVENLSSRISWQDLKDYMRKAGEITFADAHKHRRYEGVVEFATRSDMKRAIEKLDD
TELNGRRIRLIEDRQHSRSRSRSRRRSRSRSRSRRSYSRSRSRGRSRSRSRSRRSRTKSR
SRSRSKDSRSRSRSRSRSRSPRSRSRSKSRSRSRSKSVERKRSRSGGRDSRSRSGSRKMS
EEPIDKPKEMETARSRSRSRSRSRSRSRSPIDNKKETSRSRSRSRSRSRSRSPSASPRRR
DSRSGSRSRSPQENGHDHPEDE
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggcgagggtgtatgttggaggtttgcactataactgccgtgaaagagacctggaaagg
tttttcaagagatatggcaggcttcgtgattgccttatcaaaaatggatatggctttgtg
gagtttgaagatgagagagatgcagatgatgctgtctatgaaatgaatggaagagaattg
ttaggagaaagagtgactgtagaacatgcccgtggacttccaagaaggggtggttatgga
tttggtggtggtggtggtggtcgagatcgagaccgagatcgtcgaccagcttggcttgac
agagcgagttggagtaagccaagtgaccttcaccgcaggtacggccccccaacgaggaca
ccttacagggtcattgttgaaaatctgtcatcacgcatcagctggcaggatctcaaggat
tacatgcgcaaagcaggagaaattacctttgcagatgcccacaagcaccgacgctatgaa
ggtgttgtagagtttgccacacggtctgacatgaagagggccattgagaagttagacgat
acggaactgaatggaaggcgaattaggctgattgaggatcgacaacactcccgttcccgc
tcaagatctcgcaggcgatctcgttcacgctcacgatcccgcaggtcatattcaaggtca
agatcaagaggtaggagccgttcacgttcaaggtcaaggagatcaaggactaagtcacga
tcaaggtccaggtctaaggattctcgctcacggtcacgttcccgatcccgttcaaggtcc
cctcggtcacgatcaaggtcaaaatctcgatctaggtccaggtcaaagtctgtagaaaga
aagaggtcaagatcaggtggaagagacagccgttcacggtcaggctctagaaagatgtca
gaggagccaatagacaagcctaaggaaatggagacagctcgttctcgcagcagatcccgt
agtagatcacgatctagatctcgcagcccaatagataacaagaaagaaacttcacgatct
cgatcccgatcacggtcaaggtcacgatcacgatcaccctctgcatcaccacgtagacgt
gacagccgctctggatctcgttcaaggtcaccccaggaaaatggacatgaccatcccgag
gatgaataa
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