Penaeus vannamei (Pacific white shrimp): 113807409
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Entry
113807409 CDS
T06111
Symbol
slo
Name
(RefSeq) calcium-activated potassium channel slowpoke isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pvm04040
]
113807409 (slo)
Ion channels [BR:
pvm04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
113807409 (slo)
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GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
ASC
Motif
Other DBs
NCBI-GeneID:
113807409
NCBI-ProteinID:
XP_069970346
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All DBs
Position
35:complement(22003628..22369201)
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AA seq
1161 aa
AA seq
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MSDDTGPTQISDEECLKERKWWYFLLSSIFTFLAGIFIVLIWRAFSFLCCRNRDPSEYQK
QQEKEKLLAQQQGQPPGQPKPKNLMEGNFVTEAKDWAGELISGQTTTGRILVVLVFILSI
ASLVIYFIDASKDGVEHCQPWSANTTQQIDLAFNIFFMVYFFIRFIAASDKLWFMLEMYS
FVDYFTIPPSFVSIYLNRTWIGLRFLRALRLMSVPDILQYLNVLKTSSSIRLAQLCSIFI
AVWLTGAGIIHLLENSGDPLEFTNAHPLSYWTCVYFLIVTMSTVGYGDVYCQTVFGRTFL
VFFLLVGLALFASSIPEIIELVGSRSKYSGEYKREHGKRHIVVCGHITYESVSHFLKDFL
HEDREDVDVEVVFLHRKPPDLELEGLFKRHFTTVEFFQGSIMNPIDLQRVKVHEADACLV
LANKYCQDPDAEDAANIMRVISIKNYSDDIRVIIQLMQYHNKAYLLNIPSWDWKRGDDVI
CLAELKLGFIAQSCLAPGFSTMMANLFAMRSFKTSPDMQAWQNDYLQGTGCEMYTETLSP
SFVAMTFPQASELCFSKLKLLLLAIEVKNEDGTDSKIAINPKATKIQPNTQGFFIAQSAD
EVKRAWYYCKACHEDCKNETLIKKCKCKNYKSDIESELYQVTYTPPELPKRLLNNSRGDK
MPLRDGIANQNSSSGQPLVNAAKTLATAKKNGGRPTDALTSPSQGYNRLTEESTYSYHLS
YEVKKLMPTSRSSGGGNGANNSGLTVGIADDQAKDFDFEKTEMKYDSTGMFHWCPARSLE
DCILDRNQAAMTVLNGHVVVCLFADPDSPLIGLRNLVMPLRASNFHYHELKHVVIVGSVD
YIRREWKMLQNLPKISVLNGSPLSRADLRAVNVNLCDMCVILSAKVPSNDDPTLADKEAI
LASLNIKAMTFDDTIGVLNQNPSTGGDTLSPLGSPIVLQRRGSVYGANVPMITELINDSN
VQFLDQDDDDDPDTELYLTQPFACGTAFAVSVLDSLMSTTYFNQNALTLIRSLITGGATP
ELELILAEGAGLRGGYSTPETLANRDRCQVGQISLYDGPLGQFGESGIYGDLFCAALRNY
GMLCIGLYRTLRMSPQSGVGLDCRFRDTSSSCDASSKRYVITNPPDDFKLLPTDQVFVLM
QFDPGLEYKPNRGDMAKDDNS
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgacacgggtccaacccaaatctcagatgaggagtgtctaaaagaacgaaaa
tggtggtacttcttgctgtcgagtatcttcacgttcttagcggggatcttcatagttctg
atatggcgggccttctccttcctctgctgccggaaccgggacccctcggagtaccagaag
cagcaggaaaaggagaaactgctagcacagcagcagggacaaccccctggccagcccaaa
cccaagaacctgatggaagggaacttcgtcacagaagccaaggactgggcgggggagctc
atctcgggccagaccacaacaggcagaatcctggtggtgctggtgttcatcctcagtatc
gcctctctcgtcatatacttcattgacgcatcaaaggacggcgtggagcactgccagccg
tggagcgcgaacacaacacaacaaatagacttagcctttaatatattttttatggtctac
ttttttatacgttttatagcggcgagtgataaactatggttcatgctggagatgtattcc
ttcgtcgactacttcaccatcccgccctcattcgtcagcatatatctcaacagaacctgg
atagggttgcggttccttcgcgccctccgcctgatgtcagtcccggatatcctgcagtac
ctgaacgtcctcaagacatcgtccagcatccggctggcgcagctgtgctctatcttcatt
gctgtgtggctcactggcgctggtatcattcacctgctggaaaactctggtgatcccctg
gagttcaccaatgcccacccattgtcatactggacatgtgtgtattttcttattgtcacc
atgtccactgtgggttatggcgacgtttattgccagactgtgtttggaaggactttcctt
gtcttctttctcctcgttggcttggctttgtttgcaagtagcattcccgagattatagag
ctggtcgggagccggtccaagtatagtggagagtacaagcgggagcatgggaagagacac
atcgtggtatgcggccacatcacctacgagtcagtcagtcacttcctcaaagacttctta
cacgaagacagagaggatgtggatgttgaagtggtgttccttcacagaaagccaccggat
ctggagcttgaaggattatttaagcggcacttcaccacagtagagttcttccagggctcg
ataatgaaccccatagacctacaacgtgtcaaggtacatgaagctgatgcctgccttgtg
ctcgctaacaagtactgccaagaccctgatgcagaggatgctgccaacattatgcgggtc
atttccatcaagaactactcagatgacatcagagtcattatccagctcatgcagtatcac
aacaaggcatacctattgaacatcccctcctgggactggaagcgtggtgacgatgtcatt
tgcctggctgagctcaaattaggcttcatcgctcagtcttgccttgctccaggcttctct
acaatgatggctaacctgtttgccatgaggtctttcaagacgtcgccagatatgcaagcc
tggcagaatgactacctccaaggtactggctgcgaaatgtacactgagacactttctccg
agttttgtggccatgacattcccacaggcttcagaactttgcttctccaagcttaaactt
cttctcttggccattgaagtcaagaacgaggatggcacagatagcaaaattgccattaac
ccaaaagccacaaagatccagccaaacactcaaggcttctttattgctcagtcagccgat
gaggtcaagagagcatggtactactgcaaagcctgtcatgaagactgcaaaaatgaaacc
ctcattaaaaagtgcaaatgtaaaaactataagtcagatattgaatcagaactctaccaa
gttacttacacccctcccgaactacccaagcgtctgcttaacaactccagaggcgacaag
atgccgctcagagatggaattgccaaccagaacagcagcagtggacagcccttggtgaat
gcggccaaaacgctagcaacagccaagaagaatggaggccggcccacagacgccctcacc
tctcccagccagggctacaaccggctgacagaggagagcacgtacagctatcacctcagc
tacgaggtcaagaaactcatgcccaccagccgcagcagtgggggaggaaatggtgccaac
aacagtgggcttacagtaggaattgcggacgaccaagccaaggacttcgactttgagaaa
acagagatgaagtatgactcaacagggatgttccactggtgccccgcgaggtctttggag
gactgcattctggaccgcaaccaggcggccatgacggtgctgaacggccatgtggtggtg
tgcctgttcgcggaccccgactcgccgctgattggcctgaggaacctcgtgatgcctctc
agggcctccaatttccactaccacgagctcaaacacgtggtcatcgtgggctccgtcgac
tacatcagacgcgagtggaagatgttgcagaatctgcccaagatctccgttctcaatggg
tcgccgttgagtcgagcagatctgagagcagtcaatgttaacctgtgcgacatgtgtgta
atcctgagcgcgaaggtccccagcaacgatgacccgaccttagctgacaaggaagccatc
ctcgcctccctcaacatcaaggccatgaccttcgatgacaccattggggtccttaatcag
aatcccagtacgggtggcgacaccctgagtccactaggctcccccatagtgctgcagaga
cgtggctccgtgtatggtgccaatgtccccatgatcacggagctcatcaatgacagcaac
gttcagttcctcgaccaagatgacgacgatgacccagacaccgagctctatctgacgcag
ccgttcgcctgcggtacagcctttgctgtgtctgtcttggactccctcatgtctacgacc
tatttcaaccagaacgctcttacgctcattcgctcactcatcactggaggagcaacgcca
gaactagagctgatcctggcagagggtgcgggactgcggggaggatacagcacgcccgag
acacttgccaaccgcgaccgctgtcaggtggggcagatctccctctacgacggtcctctt
ggccagttcggggaaagcgggatttacggagacctcttctgcgcggccctgaggaactat
ggcatgctatgtattggtctctacagaacactccgtatgagtcctcaatctggcgttggt
ttggactgcagattccgcgacacctcaagctcgtgtgacgcgtcgtccaagcggtatgtg
ataaccaacccaccagatgacttcaagttgctgcccaccgaccaggtcttcgttctgatg
cagttcgacccaggcctggagtacaagcctaaccggggagacatggccaaggatgacaac
tcctga
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