Penaeus vannamei (Pacific white shrimp): 113807865
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Entry
113807865 CDS
T06111
Symbol
smid
Name
(RefSeq) nuclear valosin-containing protein-like
KO
K14571
ribosome biogenesis ATPase
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
113807865 (smid)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvm03009
]
113807865 (smid)
Ribosome biogenesis [BR:
pvm03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
113807865 (smid)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
Nucleolin_bd
AAA_28
AAA_22
AAA_5
RuvB_N
AAA_33
Rad17
TsaE
AAA_14
nSTAND3
RNA_helicase
AAA_18
ABC_tran
NACHT
nSTAND_NTPase5
Mg_chelatase
TIP49
AAA_29
AAA_7
AAA_24
DUF815
T2SSE
AAA_30
AAA_19
IstB_IS21
ATPase
AAA_17
Zeta_toxin
Sigma54_activat
PduV-EutP
NTPase_1
AAA_25
AAA_23
NPHP3_N
ATP_bind_1
Parvo_NS1
DEAD
Vps4_C
FtsK_SpoIIIE
SMC_N
DUF87
AAA_21
cobW
AAA_SelU
Motif
Other DBs
NCBI-GeneID:
113807865
NCBI-ProteinID:
XP_069982412
LinkDB
All DBs
Position
10:<12470726..12481551
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AA seq
778 aa
AA seq
DB search
MKMKRPYFQEKSLMPRVIKYMEENDNYTVMDMTDYLIKTYREFRGKSRMTFMKSVDKAYQ
WQKQRLKEKQEDSISEDIDDSDGGGPDIIEVETPKQEIKPFIKRQRKKHQVPSSTSTPMS
EPKMRDDFFVIDTTGGDISLNGIRTPELPKSVKMKRKKEKDIDIDGKKRKKRHQLQPETP
EITFGGMAGLESLKDQICDLLANLRWPGILQPLQKSVLITGPTGSGKTTFVQALAGTAEV
SLLRITATELIGGVSGESEEKITEVFEQAASLAPCVLLIEKIEVVAPKLMSAKSMEKRIG
AQLSSCLNNLKVRHKDTKLLVLAETSYPETLDLDLRSSFDSEIFMNIPTEPARVKILQVM
CNGISFEGNFEEIALRTPGYVAGDLKKLVEKSQGLAWKRRKDCLYGKTGGETLMEEVNSF
LKQFGEMCESEAPDSMVTVNMEDFLEALLHIIPALKREGFPTVPDVTWQDIGGLEDIKKE
LREKILEPIKYAKLHEEFGASRPNGILMWGPPGCGKTLLAKAVANEAGINLLPVMGPELL
NMYQGESERAVREVFTRARNVAPCVIFFDEFDSLCPVRSKGAESGSKTTIVNTLLTEMNG
FSKREDVYVIAATNRPDILDPAVTRPGRFDTLLYVDVPDHEGRVSIFQARTKNGTCPQCA
PDVDFAEISLQCNNFSGADCDQLVYLASKEAIREVIHGSQDISSADNSDKEPKTRLVAKR
HFSAALKKIKPSIKPEEQKRYKKLNLKMGAVPLQESAGGTSQDASFIDADKESQPMDI
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgaaacgcccatattttcaagaaaaatcattgatgcctagagttattaagtat
atggaagaaaatgacaattacactgttatggatatgacagactacctgataaaaacatac
cgtgaatttagaggaaaaagcagaatgactttcatgaagagtgtggacaaagcctatcag
tggcagaaacaacggctgaaagagaaacaagaagatagcatatctgaagacatagacgac
agtgatggtggaggccctgacattattgaggttgaaacaccaaagcaggaaataaaaccc
tttataaaaaggcagcgcaagaagcaccaagtaccctcatcaacaagtactcccatgtcc
gaaccaaaaatgagggatgacttctttgtgattgacactacaggtggtgatatttctcta
aatggcatcagaaccccagagttgccaaaaagtgtcaagatgaaaaggaaaaaggagaaa
gacattgatatagatggaaagaaaagaaaaaagagacaccaattgcagcctgaaacacca
gaaatcacttttgggggtatggctggcctagaatcactgaaagatcaaatttgtgacttg
cttgcaaatcttcgctggcctggaattttacagcctctccagaagtcagtgctcatcact
ggcccgacaggaagtggaaaaactacctttgtgcaggcactggctgggactgctgaggtt
tcactattgcgcatcacagcaactgaattaattggtggagtctcaggagagagtgaggag
aagatcactgaggtgtttgagcaagcagcctcacttgcgccatgtgtgcttttgatagag
aagattgaagtcgtagctccaaagttgatgtcagcaaagagcatggagaaaagaattggg
gcccagctttcttcatgcctcaacaatctcaaagtcaggcacaaagatacaaaactgctg
gtgctagctgaaacaagttatccagaaaccctggacttggatctccgtagcagttttgac
tctgagatattcatgaacattccaacagagccagcccgagtgaaaatattgcaggtgatg
tgcaatggaatatcttttgaagggaactttgaagaaatagccctcagaactcctggctat
gttgctggagatctgaagaagttggttgagaagtctcagggattggcatggaagaggaga
aaggattgcctttatggaaagacaggaggtgaaaccttaatggaagaagtgaatagtttt
ctcaaacagtttggagaaatgtgtgaatcagaggctccagattccatggtaacagtcaat
atggaagactttttggaagcactattgcacataataccagcattgaaaagagaaggattt
cctaccgtaccagacgtcacatggcaagatattggaggattggaagatataaaaaaggaa
ttaagggagaagatattggaacctatcaaatatgcaaagcttcatgaggagtttggtgcg
agtcgacccaatggaatattgatgtgggggcctccaggatgtggcaaaacccttctagcc
aaagcagtggcaaatgaagcaggaatcaatcttttgccagtgatgggacctgaactcctt
aatatgtatcaaggtgagagtgaacgggcagtgcgagaggtcttcacacgagcacgcaat
gtagctccatgtgtgattttctttgatgaatttgactctctgtgccctgtcagaagcaaa
ggagctgagagtggaagtaaaacaacaattgtaaatacactgctgacagagatgaatggc
ttctcaaaaagagaagatgtgtatgttattgcagcaacaaacagaccggacatcctggac
cctgccgtgactcgaccagggagatttgatactctgctttatgttgatgtccctgatcat
gagggaagggtttctatctttcaggcaagaactaagaatggaacttgtcctcagtgtgcc
ccagatgttgactttgcagaaatttctcttcagtgcaacaatttctcaggagctgattgt
gaccagctggtgtatctagctagcaaagaggccatcagggaagttattcatggctcccaa
gacatctcttctgctgacaatagtgataaagagcccaagacacgtttggttgcaaagcgg
catttctctgctgccttaaagaagattaagccgtccattaaacctgaggaacaaaagcgt
tacaagaaacttaatctgaagatgggagcagttcctttacaagagtctgcaggaggaacc
agtcaagatgcaagttttattgatgcagataaagagtctcagccaatggatatatga
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