Penaeus vannamei (Pacific white shrimp): 113808005
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Entry
113808005 CDS
T06111
Name
(RefSeq) nuclear pore glycoprotein p62
KO
K14306
nuclear pore complex protein Nup62
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113808005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvm03019
]
113808005
Messenger RNA biogenesis [BR:
pvm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113808005
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nsp1_C
FPP
YwqH-like
Exonuc_VII_L
Mis12
FapA
Fez1
DUF3450
Motif
Other DBs
NCBI-GeneID:
113808005
NCBI-ProteinID:
XP_069976405
LinkDB
All DBs
Position
Unknown
AA seq
646 aa
AA seq
DB search
MSGFNFGGGGGSSGFSFGTPAQAATTTAAAVAPSSGFSFSSPATSSSGGSSGFSFGKPAT
SAAPLGGGFSFSHPAAPATASAAPMGSSFFSNPASTASGGSLLGNPPAASTAGSGFSFSS
GSNFSFTPTSTPANTGGLGTAAPGLGTAAPGLGTAASGLGTTAPGLGTAAPGLGTVASGL
GTAASGLGTAASGLGTTAPGLGTTAPGLGTAAPGLGAAAPGLGAAAPGLGAAAPALGAAV
PALGTATPGLGTATSSGGSSGFSFSLPSSTPASQPTLQAATSSASTLFSLTAKPAATGGG
LTVGAKSYPNTTGGMPSLLSTLSSSTTATSATATGLGQALSVTTAPAPSLPAASGATTGG
IFNSGVAAPAPVTAAATPSILGMKLAGNTTTSTFGAVPALGSSPLLAKPASSAPSLTSGF
PLTTTSTATSSVPASTPALATLTTATSTSSASITAAPAAATPTLSVRGLEEKVNKWVSEM
REQEERLMRQAAHVNAWDQLLQKGHDQVQQLRDTLNTVEVDQQRLQAELDFIQGQQQELE
QLIEPLESAASTTSPAQHQGDRQRENMYHIAQNLDSQLRQMTDDLCKVIEHLNNNNSSSQ
ASDPVTTIARVLSAHMDTLKWVDQNSALLSQKVDDLSRAADSKRRD
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggatttaattttggaggtgggggtggttctagtggctttagcttcgggacacct
gctcaggcagcaacaacaacagcggctgctgttgcaccaagcagtggtttcagcttcagt
tcacctgctacaagttcatctggaggaagctcaggattcagttttggcaaaccagcaacc
tctgctgcaccactgggaggaggatttagctttagccatcctgctgctcctgctacagca
agtgctgcacccatgggaagttcttttttcagtaatccagccagtacagcttctggtggc
agcctactaggaaatcctccagcagcctcaacagctgggagtggatttagtttcagtagt
ggaagcaacttcagcttcacacccacttcaacacctgctaataccggaggtcttggaaca
gcagctcctggactcggaacagcagctcctggactcggaacagcagcttccggacttgga
acaacagctcctggacttggaacagcagctcccggacttggaacagtagcttccggactt
ggaacagcagcttctggacttggaacagcagcttccggacttggaacaacagctcctggg
cttggaacaacagctcctggacttggaacagcagctcctggacttggagcagcagctcct
ggacttggagcagcagctcctggacttggagcagcagctcctgcacttggagcagcagtt
cctgcacttggaacagcaactcctggacttggaacagcaacttcttctggaggatcttca
gggttttctttctctcttccaagttctacaccagcatcacagcctacattgcaggctgca
acatcttcagcttcaacattgttttcccttacagctaaaccggcagcaacaggaggaggt
cttactgttggtgcaaagtcttatcctaacactacaggaggaatgccatcactcttatca
acattaagctcttcaacaactgctacaagtgcaacagctactgggctcggtcaagctcta
agtgttacaacagcacctgcaccaagtctgccagcagcctctggtgccacaacaggtgga
atttttaacagtggagttgcagcacctgctccagtcacagctgctgccacaccatctatc
ttgggcatgaaactggcaggaaacaccacaacttcaacgtttggtgcagttccagctctt
ggttcatcccctctccttgctaagcctgcttcctctgcaccctcactaacctctggcttc
cctcttaccacaacatcaacagcaacatctagtgtgccggcatcaactcctgcattggct
actcttacaacagctactagcacaagcagtgcatctatcacagcagcaccagcagctgct
actcccacactcagtgtaagaggattagaagaaaaggtaaacaagtgggtatctgagatg
cgagaacaggaggagcgactgatgaggcaggctgcacatgtcaatgcttgggaccagctt
ctccagaaagggcatgaccaggttcagcagcttcgtgacacccttaacactgtggaggtg
gatcagcagagactacaagcagagttagatttcattcagggtcagcagcaagaattagag
cagctgattgaacctttagaatctgctgcatcaactacatccccagcacagcaccagggt
gatcgtcagagggagaacatgtatcacattgcacaaaaccttgactcccagcttcgccag
atgacagatgacttgtgtaaggttattgaacatttgaacaacaacaactcctcctcacaa
gcttctgacccagttacaacaattgccagagtgctgtcagcacatatggacaccttaaaa
tgggttgaccaaaactctgcattactttcccaaaaggtggatgatctctctagagcagca
gactccaaaaggagagactga
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