KEGG   Penaeus vannamei (Pacific white shrimp): 113808005
Entry
113808005         CDS       T06111                                 
Name
(RefSeq) nuclear pore glycoprotein p62
  KO
K14306  nuclear pore complex protein Nup62
Organism
pvm  Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:pvm00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    113808005
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pvm03019]
    113808005
Messenger RNA biogenesis [BR:pvm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     113808005
SSDB
Motif
Pfam: Nsp1_C FPP YwqH-like Exonuc_VII_L Mis12 FapA Fez1 DUF3450
Other DBs
NCBI-GeneID: 113808005
NCBI-ProteinID: XP_069976405
LinkDB
Position
Unknown
AA seq 646 aa
MSGFNFGGGGGSSGFSFGTPAQAATTTAAAVAPSSGFSFSSPATSSSGGSSGFSFGKPAT
SAAPLGGGFSFSHPAAPATASAAPMGSSFFSNPASTASGGSLLGNPPAASTAGSGFSFSS
GSNFSFTPTSTPANTGGLGTAAPGLGTAAPGLGTAASGLGTTAPGLGTAAPGLGTVASGL
GTAASGLGTAASGLGTTAPGLGTTAPGLGTAAPGLGAAAPGLGAAAPGLGAAAPALGAAV
PALGTATPGLGTATSSGGSSGFSFSLPSSTPASQPTLQAATSSASTLFSLTAKPAATGGG
LTVGAKSYPNTTGGMPSLLSTLSSSTTATSATATGLGQALSVTTAPAPSLPAASGATTGG
IFNSGVAAPAPVTAAATPSILGMKLAGNTTTSTFGAVPALGSSPLLAKPASSAPSLTSGF
PLTTTSTATSSVPASTPALATLTTATSTSSASITAAPAAATPTLSVRGLEEKVNKWVSEM
REQEERLMRQAAHVNAWDQLLQKGHDQVQQLRDTLNTVEVDQQRLQAELDFIQGQQQELE
QLIEPLESAASTTSPAQHQGDRQRENMYHIAQNLDSQLRQMTDDLCKVIEHLNNNNSSSQ
ASDPVTTIARVLSAHMDTLKWVDQNSALLSQKVDDLSRAADSKRRD
NT seq 1941 nt   +upstreamnt  +downstreamnt
atgtcaggatttaattttggaggtgggggtggttctagtggctttagcttcgggacacct
gctcaggcagcaacaacaacagcggctgctgttgcaccaagcagtggtttcagcttcagt
tcacctgctacaagttcatctggaggaagctcaggattcagttttggcaaaccagcaacc
tctgctgcaccactgggaggaggatttagctttagccatcctgctgctcctgctacagca
agtgctgcacccatgggaagttcttttttcagtaatccagccagtacagcttctggtggc
agcctactaggaaatcctccagcagcctcaacagctgggagtggatttagtttcagtagt
ggaagcaacttcagcttcacacccacttcaacacctgctaataccggaggtcttggaaca
gcagctcctggactcggaacagcagctcctggactcggaacagcagcttccggacttgga
acaacagctcctggacttggaacagcagctcccggacttggaacagtagcttccggactt
ggaacagcagcttctggacttggaacagcagcttccggacttggaacaacagctcctggg
cttggaacaacagctcctggacttggaacagcagctcctggacttggagcagcagctcct
ggacttggagcagcagctcctggacttggagcagcagctcctgcacttggagcagcagtt
cctgcacttggaacagcaactcctggacttggaacagcaacttcttctggaggatcttca
gggttttctttctctcttccaagttctacaccagcatcacagcctacattgcaggctgca
acatcttcagcttcaacattgttttcccttacagctaaaccggcagcaacaggaggaggt
cttactgttggtgcaaagtcttatcctaacactacaggaggaatgccatcactcttatca
acattaagctcttcaacaactgctacaagtgcaacagctactgggctcggtcaagctcta
agtgttacaacagcacctgcaccaagtctgccagcagcctctggtgccacaacaggtgga
atttttaacagtggagttgcagcacctgctccagtcacagctgctgccacaccatctatc
ttgggcatgaaactggcaggaaacaccacaacttcaacgtttggtgcagttccagctctt
ggttcatcccctctccttgctaagcctgcttcctctgcaccctcactaacctctggcttc
cctcttaccacaacatcaacagcaacatctagtgtgccggcatcaactcctgcattggct
actcttacaacagctactagcacaagcagtgcatctatcacagcagcaccagcagctgct
actcccacactcagtgtaagaggattagaagaaaaggtaaacaagtgggtatctgagatg
cgagaacaggaggagcgactgatgaggcaggctgcacatgtcaatgcttgggaccagctt
ctccagaaagggcatgaccaggttcagcagcttcgtgacacccttaacactgtggaggtg
gatcagcagagactacaagcagagttagatttcattcagggtcagcagcaagaattagag
cagctgattgaacctttagaatctgctgcatcaactacatccccagcacagcaccagggt
gatcgtcagagggagaacatgtatcacattgcacaaaaccttgactcccagcttcgccag
atgacagatgacttgtgtaaggttattgaacatttgaacaacaacaactcctcctcacaa
gcttctgacccagttacaacaattgccagagtgctgtcagcacatatggacaccttaaaa
tgggttgaccaaaactctgcattactttcccaaaaggtggatgatctctctagagcagca
gactccaaaaggagagactga

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